Rmu_sc0003291.1_g000033

UDP-glycosyltransferase 91A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003291.1
OG0022371
Physical Location & Seq
Reverse (-)
151276 .. 151686
411 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003291.1_g000033.1.cds

Sequence Viewer

Length: 411 bp
atggagtccgtcaccgtccacccaaccatgcccagcaacaaagacaataatcttcatattgccatgtttccatggctagcctttggccatatgatcccatacctcgaactcgccaagctgatcgccagaaaaggccaccaaatctcattcatctccaccccaagaaatatcgaccgcctcccagcactcccgcctaaactctccaccctaatcaccttcgtgaagcttccactgcccgagaatccgaaccttccagaaggcgccgaggccacctccgacttacccgaagaccaggtcgcgcatcttaagatagcctacgatctttcaaggaaccgattacccaattcctcaaatcttcaaacccggattggcttctcttcgatttcgccccttactggctaccggagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

136

Amino Acids

15.22

Weight (kDa)

9.45

Isoelectric Point (pI)

52.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0022371)

Species Orthologous Gene IDs
malus_domestica MD02G1083700.v1.1
rosa_multiflora Rmu_sc0003291.1_g000007 Rmu_sc0003291.1_g000033
rosa_samantha Rh2DG227800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 260
AccII CGCG 1 cut(s) 299
AciI CCGC 2 cut(s) 175, 191
AclWI GGATC 1 cut(s) 88
AcoI YGGCCR 1 cut(s) 85
AcyI GRCGYC 1 cut(s) 261
AfiI CCNNNNNNNGG 1 cut(s) 395
AflII CTTAAG 1 cut(s) 305
AgsI TTSAA 2 cut(s) 327, 359
AjnI CCWGG 1 cut(s) 291
AleI CACNNNNGTG 1 cut(s) 218
AluBI AGCT 2 cut(s) 118, 226
AluI AGCT 2 cut(s) 118, 226
AlwI GGATC 1 cut(s) 88
Ama87I CYCGRG 1 cut(s) 236
AoxI GGCC 3 cut(s) 85, 133, 267
ArsI GACNNNNNNTTYG 2 cut(s) 279, 311
AspLEI GCGC 2 cut(s) 263, 301
AsuC2I CCSGG 1 cut(s) 364
AsuHPI GGTGA 2 cut(s) 4, 205
AsuNHI GCTAGC 1 cut(s) 76
AvaI CYCGRG 1 cut(s) 236
BalI TGGCCA 1 cut(s) 87
BanI GGYRCC 1 cut(s) 260
BbsI GAAGAC 1 cut(s) 294
BciT130I CCWGG 1 cut(s) 293
BcnI CCSGG 1 cut(s) 364
BfaI CTAG 1 cut(s) 77
BfoI RGCGCY 1 cut(s) 264
BfrI CTTAAG 1 cut(s) 305
Bme1390I CCNGG 2 cut(s) 293, 364
BmeT110I CYCGRG 1 cut(s) 236
BmiI GGNNCC 2 cut(s) 262, 332
BmrFI CCNGG 2 cut(s) 293, 364
BmsI GCATC 1 cut(s) 310
BmtI GCTAGC 1 cut(s) 80
BpiI GAAGAC 1 cut(s) 294
BplI GAGNNNNNCTC 2 cut(s) 257, 289
BpuMI CCSGG 1 cut(s) 364
BsaHI GRCGYC 1 cut(s) 261
BsaJI CCNNGG 2 cut(s) 71, 264
BsaWI WCCGGW 1 cut(s) 402
Bsc4I CCNNNNNNNGG 1 cut(s) 395
Bse1I ACTGG 1 cut(s) 400
BseBI CCWGG 1 cut(s) 293
BseDI CCNNGG 2 cut(s) 71, 264
BseLI CCNNNNNNNGG 1 cut(s) 395
BseNI ACTGG 1 cut(s) 400
BseYI CCCAGC 2 cut(s) 32, 181
Bsh1236I CGCG 1 cut(s) 299
Bsh1285I CGRYCG 1 cut(s) 175
BshFI GGCC 3 cut(s) 87, 135, 269
BshNI GGYRCC 1 cut(s) 260
BsiEI CGRYCG 1 cut(s) 175
BsiHKCI CYCGRG 1 cut(s) 236
BsiSI CCGG 2 cut(s) 364, 403
BslI CCNNNNNNNGG 1 cut(s) 395
BsnI GGCC 3 cut(s) 87, 135, 269
BsoBI CYCGRG 1 cut(s) 236
Bsp143I GATC 3 cut(s) 93, 120, 319
Bsp19I CCATGG 1 cut(s) 71
BspACI CCGC 2 cut(s) 175, 191
BspANI GGCC 3 cut(s) 87, 135, 269
BspFNI CGCG 1 cut(s) 299
BspLI GGNNCC 2 cut(s) 262, 332
BspOI GCTAGC 1 cut(s) 80
BspPI GGATC 1 cut(s) 88
BspT107I GGYRCC 1 cut(s) 260
BspTI CTTAAG 1 cut(s) 305
BsrI ACTGG 1 cut(s) 400
BssECI CCNNGG 2 cut(s) 71, 264
BssMI GATC 3 cut(s) 93, 120, 319
BssNI GRCGYC 1 cut(s) 261
BssT1I CCWWGG 1 cut(s) 71
Bst2UI CCWGG 1 cut(s) 293
Bst4CI ACNGT 1 cut(s) 16
Bst6I CTCTTC 1 cut(s) 382
BstACI GRCGYC 1 cut(s) 261
BstAFI CTTAAG 1 cut(s) 305
BstC8I GCNNGC 1 cut(s) 78
BstDSI CCRYGG 1 cut(s) 71
BstFNI CGCG 1 cut(s) 299
BstH2I RGCGCY 1 cut(s) 264
BstHHI GCGC 2 cut(s) 263, 301
BstKTI GATC 3 cut(s) 96, 123, 322
BstMBI GATC 3 cut(s) 93, 120, 319
BstMCI CGRYCG 1 cut(s) 175
BstMWI GCNNNNNNNGC 1 cut(s) 232
BstNI CCWGG 1 cut(s) 293
BstSCI CCNGG 2 cut(s) 291, 362
BstUI CGCG 1 cut(s) 299
BstV2I GAAGAC 1 cut(s) 294
BsuRI GGCC 3 cut(s) 87, 135, 269
BtgI CCRYGG 1 cut(s) 71
BtsI GCAGTG 1 cut(s) 230
BtsIMutI CAGTG 1 cut(s) 230
Cac8I GCNNGC 1 cut(s) 78
CfoI GCGC 2 cut(s) 263, 301
CsiI ACCWGGT 1 cut(s) 291
CviAII CATG 3 cut(s) 28, 64, 72
DinI GGCGCC 1 cut(s) 262
DpnI GATC 3 cut(s) 95, 122, 321
DpnII GATC 3 cut(s) 93, 120, 319
EaeI YGGCCR 1 cut(s) 85
Eam1104I CTCTTC 1 cut(s) 382
EarI CTCTTC 1 cut(s) 382
Eco130I CCWWGG 1 cut(s) 71
Eco88I CYCGRG 1 cut(s) 236
EcoRII CCWGG 1 cut(s) 291
EcoT14I CCWWGG 1 cut(s) 71
EgeI GGCGCC 1 cut(s) 262
EheI GGCGCC 1 cut(s) 262
ErhI CCWWGG 1 cut(s) 71
FaeI CATG 3 cut(s) 31, 67, 75
FaiI YATR 7 cut(s) 29, 57, 65, 73, 90, 92, 100
FatI CATG 3 cut(s) 27, 63, 71
FauI CCCGC 1 cut(s) 198
FauNDI CATATG 1 cut(s) 90
FspBI CTAG 1 cut(s) 77
GlaI GCGC 2 cut(s) 262, 300
GsaI CCCAGC 2 cut(s) 36, 185
HaeII RGCGCY 1 cut(s) 264
HaeIII GGCC 3 cut(s) 87, 135, 269
HapII CCGG 2 cut(s) 364, 403
HhaI GCGC 2 cut(s) 263, 301
Hin1I GRCGYC 1 cut(s) 261
Hin1II CATG 3 cut(s) 31, 67, 75
Hin6I GCGC 2 cut(s) 261, 299
HinP1I GCGC 2 cut(s) 261, 299
HindIII AAGCTT 1 cut(s) 224
HinfI GANTC 2 cut(s) 5, 241
HpaII CCGG 2 cut(s) 364, 403
HphI GGTGA 2 cut(s) 4, 205
Hpy166II GTNNAC 1 cut(s) 19
Hpy188I TCNGA 2 cut(s) 246, 277
Hpy188III TCNNGA 2 cut(s) 220, 254
Hpy8I GTNNAC 1 cut(s) 19
HpyAV CCTTC 3 cut(s) 226, 251, 260
HpyCH4III ACNGT 1 cut(s) 16
HpyF10VI GCNNNNNNNGC 1 cut(s) 232
Hsp92I GRCGYC 1 cut(s) 261
Hsp92II CATG 3 cut(s) 31, 67, 75
HspAI GCGC 2 cut(s) 261, 299
KasI GGCGCC 1 cut(s) 260
Kzo9I GATC 3 cut(s) 93, 120, 319
LpnPI CCDG 8 cut(s) 46, 139, 195, 267, 278, 305, 377, 381
LweI GCATC 1 cut(s) 310
MabI ACCWGGT 1 cut(s) 291
MaeI CTAG 1 cut(s) 77
MaeIII GTNAC 1 cut(s) 10
MalI GATC 3 cut(s) 95, 122, 321
MboI GATC 3 cut(s) 93, 120, 319
MboII GAAGA 4 cut(s) 44, 299, 347, 369
MlsI TGGCCA 1 cut(s) 87
MluCI AATT 1 cut(s) 343
MluNI TGGCCA 1 cut(s) 87
Mly113I GGCGCC 1 cut(s) 261
MlyI GAGTC 1 cut(s) 14
MmeI TCCRAC 1 cut(s) 300
MnlI CCTC 5 cut(s) 113, 188, 259, 283, 358
Mox20I TGGCCA 1 cut(s) 87
MscI TGGCCA 1 cut(s) 87
MseI TTAA 1 cut(s) 306
MslI CAYNNNNRTG 1 cut(s) 218
Msp20I TGGCCA 1 cut(s) 87
MspCI CTTAAG 1 cut(s) 305
MspI CCGG 2 cut(s) 364, 403
MspR9I CCNGG 2 cut(s) 293, 364
MvaI CCWGG 1 cut(s) 293
MvnI CGCG 1 cut(s) 299
MwoI GCNNNNNNNGC 1 cut(s) 232
NarI GGCGCC 1 cut(s) 261
NciI CCSGG 1 cut(s) 364
NcoI CCATGG 1 cut(s) 71
NdeI CATATG 1 cut(s) 90
NdeII GATC 3 cut(s) 93, 120, 319
NheI GCTAGC 1 cut(s) 76
NlaIII CATG 3 cut(s) 31, 67, 75
NlaIV GGNNCC 2 cut(s) 262, 332
NmeAIII GCCGAG 1 cut(s) 289
NmuCI GTSAC 1 cut(s) 10
OliI CACNNNNGTG 1 cut(s) 218
PfeI GAWTC 1 cut(s) 241
PflFI GACNNNGTC 1 cut(s) 293
PleI GAGTC 1 cut(s) 13
PluTI GGCGCC 1 cut(s) 264
PpsI GAGTC 1 cut(s) 13
Psp6I CCWGG 1 cut(s) 291
PspFI CCCAGC 2 cut(s) 32, 181
PspGI CCWGG 1 cut(s) 291
PspN4I GGNNCC 2 cut(s) 262, 332
PsyI GACNNNGTC 1 cut(s) 293
RseI CAYNNNNRTG 1 cut(s) 218
SaqAI TTAA 1 cut(s) 306
Sau3AI GATC 3 cut(s) 93, 120, 319
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 2 cut(s) 293, 364
SetI ASST 7 cut(s) 105, 120, 218, 228, 252, 275, 297
SexAI ACCWGGT 1 cut(s) 291
SfaNI GCATC 1 cut(s) 310
SfoI GGCGCC 1 cut(s) 262
SmiMI CAYNNNNRTG 1 cut(s) 218
SmlI CTYRAG 1 cut(s) 305
SmoI CTYRAG 1 cut(s) 305
Sse9I AATT 1 cut(s) 343
SsiI CCGC 2 cut(s) 175, 191
SspDI GGCGCC 1 cut(s) 260
SspMI CTAG 1 cut(s) 77
StyD4I CCNGG 2 cut(s) 291, 362
StyI CCWWGG 1 cut(s) 71
TaaI ACNGT 1 cut(s) 16
TaqI TCGA 3 cut(s) 105, 171, 380
TasI AATT 1 cut(s) 343
TfiI GAWTC 1 cut(s) 241
Tru1I TTAA 1 cut(s) 306
Tru9I TTAA 1 cut(s) 306
TscAI CASTG 1 cut(s) 237
TseFI GTSAC 1 cut(s) 10
Tsp45I GTSAC 1 cut(s) 10
TspDTI ATGAA 2 cut(s) 44, 139
TspRI CASTG 1 cut(s) 237
Tth111I GACNNNGTC 1 cut(s) 293
Vha464I CTTAAG 1 cut(s) 305
XspI CTAG 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.