Pentatricopeptide repeat-containing protein At5g50390
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0167811 |
| rosa_multiflora | Rmu_sc0003354.1_g000003 |
| rosa_samantha | Rh2AG601100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 5 |
| AcuI | CTGAAG | 1 cut(s) | 269 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 156, 247 |
| AspS9I | GGNCC | 1 cut(s) | 118 |
| AsuHPI | GGTGA | 1 cut(s) | 263 |
| AvaII | GGWCC | 1 cut(s) | 118 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 282, 314 |
| BbsI | GAAGAC | 1 cut(s) | 17 |
| BccI | CCATC | 3 cut(s) | 18, 109, 361 |
| BceAI | ACGGC | 1 cut(s) | 325 |
| BclI | TGATCA | 1 cut(s) | 184 |
| Bme18I | GGWCC | 1 cut(s) | 118 |
| BmgT120I | GGNCC | 1 cut(s) | 118 |
| BmsI | GCATC | 3 cut(s) | 157, 180, 270 |
| BpiI | GAAGAC | 1 cut(s) | 17 |
| BsaJI | CCNNGG | 1 cut(s) | 241 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 156, 247 |
| BseDI | CCNNGG | 1 cut(s) | 241 |
| BseGI | GGATG | 2 cut(s) | 29, 372 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 156, 247 |
| BseRI | GAGGAG | 1 cut(s) | 83 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 156, 247 |
| BsmI | GAATGC | 1 cut(s) | 220 |
| Bsp143I | GATC | 2 cut(s) | 33, 184 |
| BssECI | CCNNGG | 1 cut(s) | 241 |
| BssMI | GATC | 2 cut(s) | 33, 184 |
| Bst4CI | ACNGT | 1 cut(s) | 242 |
| BstC8I | GCNNGC | 1 cut(s) | 338 |
| BstDSI | CCRYGG | 1 cut(s) | 241 |
| BstEII | GGTNACC | 1 cut(s) | 236 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 154 |
| BstF5I | GGATG | 2 cut(s) | 29, 372 |
| BstKTI | GATC | 2 cut(s) | 36, 187 |
| BstMBI | GATC | 2 cut(s) | 33, 184 |
| BstPI | GGTNACC | 1 cut(s) | 236 |
| BstV2I | GAAGAC | 1 cut(s) | 17 |
| BtgI | CCRYGG | 1 cut(s) | 241 |
| BtsCI | GGATG | 2 cut(s) | 29, 372 |
| Cac8I | GCNNGC | 1 cut(s) | 338 |
| Cfr13I | GGNCC | 1 cut(s) | 118 |
| CviAII | CATG | 4 cut(s) | 56, 136, 176, 308 |
| CviJI | RGCY | 2 cut(s) | 74, 260 |
| CviKI_1 | RGCY | 2 cut(s) | 74, 260 |
| DpnI | GATC | 2 cut(s) | 35, 186 |
| DpnII | GATC | 2 cut(s) | 33, 184 |
| Eco47I | GGWCC | 1 cut(s) | 118 |
| Eco57I | CTGAAG | 1 cut(s) | 269 |
| Eco91I | GGTNACC | 1 cut(s) | 236 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 154 |
| EcoO65I | GGTNACC | 1 cut(s) | 236 |
| FaeI | CATG | 4 cut(s) | 59, 139, 179, 311 |
| FatI | CATG | 4 cut(s) | 55, 135, 175, 307 |
| FbaI | TGATCA | 1 cut(s) | 184 |
| FblI | GTMKAC | 1 cut(s) | 5 |
| FokI | GGATG | 1 cut(s) | 36 |
| Hin1II | CATG | 4 cut(s) | 59, 139, 179, 311 |
| HincII | GTYRAC | 1 cut(s) | 6 |
| HindII | GTYRAC | 1 cut(s) | 6 |
| HinfI | GANTC | 1 cut(s) | 101 |
| HphI | GGTGA | 1 cut(s) | 263 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy188I | TCNGA | 2 cut(s) | 189, 359 |
| Hpy188III | TCNNGA | 1 cut(s) | 287 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyAV | CCTTC | 1 cut(s) | 284 |
| HpyCH4III | ACNGT | 1 cut(s) | 242 |
| HpyCH4IV | ACGT | 1 cut(s) | 362 |
| HpyCH4V | TGCA | 2 cut(s) | 50, 155 |
| HpySE526I | ACGT | 1 cut(s) | 362 |
| Hsp92II | CATG | 4 cut(s) | 59, 139, 179, 311 |
| Ksp22I | TGATCA | 1 cut(s) | 184 |
| Kzo9I | GATC | 2 cut(s) | 33, 184 |
| LpnPI | CCDG | 4 cut(s) | 90, 163, 272, 334 |
| LweI | GCATC | 3 cut(s) | 157, 180, 270 |
| MaeII | ACGT | 1 cut(s) | 362 |
| MaeIII | GTNAC | 3 cut(s) | 59, 236, 310 |
| MalI | GATC | 2 cut(s) | 35, 186 |
| MboI | GATC | 2 cut(s) | 33, 184 |
| MboII | GAAGA | 3 cut(s) | 22, 176, 289 |
| MfeI | CAATTG | 1 cut(s) | 15 |
| MluCI | AATT | 1 cut(s) | 15 |
| MmeI | TCCRAC | 1 cut(s) | 208 |
| MnlI | CCTC | 3 cut(s) | 61, 64, 250 |
| MunI | CAATTG | 1 cut(s) | 15 |
| Mva1269I | GAATGC | 1 cut(s) | 220 |
| NdeII | GATC | 2 cut(s) | 33, 184 |
| NlaIII | CATG | 4 cut(s) | 59, 139, 179, 311 |
| PctI | GAATGC | 1 cut(s) | 220 |
| PfeI | GAWTC | 1 cut(s) | 101 |
| PspEI | GGTNACC | 1 cut(s) | 236 |
| PspPI | GGNCC | 1 cut(s) | 118 |
| SalI | GTCGAC | 1 cut(s) | 4 |
| Sau3AI | GATC | 2 cut(s) | 33, 184 |
| Sau96I | GGNCC | 1 cut(s) | 118 |
| SetI | ASST | 3 cut(s) | 152, 353, 365 |
| SfaNI | GCATC | 3 cut(s) | 157, 180, 270 |
| SinI | GGWCC | 1 cut(s) | 118 |
| Sse9I | AATT | 1 cut(s) | 15 |
| TaaI | ACNGT | 1 cut(s) | 242 |
| TaiI | ACGT | 1 cut(s) | 365 |
| TaqI | TCGA | 1 cut(s) | 5 |
| TasI | AATT | 1 cut(s) | 15 |
| TfiI | GAWTC | 1 cut(s) | 101 |
| TspDTI | ATGAA | 1 cut(s) | 44 |
| VpaK11BI | GGWCC | 1 cut(s) | 118 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 154 |
| XmiI | GTMKAC | 1 cut(s) | 5 |