Rmu_sc0003393.1_g000010

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003393.1
OG0021619
Physical Location & Seq
Forward (+)
58315 .. 58713
399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003393.1_g000010.1.cds

Sequence Viewer

Length: 399 bp
atgacgacgtcgtctgctcagtcccaacaatccactccctcctcctgggcattgctcccttggaggacccggatctcgttatcgcttctgtcaaagttaacggacgccgctcgccgaccaatcgacaccatcaaccgccgtctcatgagcttcctctacttacgctcctccgccactccctcagctccctacaaaggcgtcaccacctccgacgtcaccgtcgaccaaacccgcaacctctggttccgcttctacgtcccctctacgacgtcgtcttcccccgcctctttacccgtcttcgttttcttccacgacggcggcttcagctttctcagccccgactcctacgcctacgactccgtctgccgcaaattcgcccgcgaaatcccctcgtcgtag

Protein Analysis

132

Amino Acids

14.78

Weight (kDa)

10.0

Isoelectric Point (pI)

74.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0021619)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0003393.1_g000010 Rmu_sc0017088.1_g000001 Rmu_ssc0000259.1_g000018
rosa_samantha Rh6BG145300 Rh6DG129600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 10, 218
AatII GACGTC 3 cut(s) 11, 216, 272
AccBSI CCGCTC 1 cut(s) 110
AccI GTMKAC 1 cut(s) 222
AccII CGCG 1 cut(s) 381
AciI CCGC 9 cut(s) 108, 136, 171, 232, 247, 282, 318, 367, 379
AclWI GGATC 1 cut(s) 80
AcsI RAATTY 1 cut(s) 371
AcuI CTGAAG 1 cut(s) 307
AcyI GRCGYC 5 cut(s) 8, 105, 198, 213, 269
AfiI CCNNNNNNNGG 2 cut(s) 45, 194
AjnI CCWGG 1 cut(s) 44
AluBI AGCT 3 cut(s) 150, 185, 327
AluI AGCT 3 cut(s) 150, 185, 327
Alw26I GTCTC 1 cut(s) 146
AlwI GGATC 1 cut(s) 80
ApoI RAATTY 1 cut(s) 371
AspS9I GGNCC 1 cut(s) 66
AsuC2I CCSGG 1 cut(s) 70
AsuHPI GGTGA 2 cut(s) 193, 208
AvaII GGWCC 1 cut(s) 66
BbsI GAAGAC 2 cut(s) 267, 289
BbvCI CCTCAGC 1 cut(s) 181
BccI CCATC 1 cut(s) 137
BceAI ACGGC 2 cut(s) 123, 331
BciT130I CCWGG 1 cut(s) 46
BcnI CCSGG 1 cut(s) 70
BcoDI GTCTC 1 cut(s) 146
BisI GCNGC 3 cut(s) 108, 319, 367
BlsI GCNGC 3 cut(s) 109, 320, 368
Bme1390I CCNGG 2 cut(s) 46, 70
Bme18I GGWCC 1 cut(s) 66
BmgT120I GGNCC 1 cut(s) 66
BmiI GGNNCC 2 cut(s) 68, 245
BmrFI CCNGG 2 cut(s) 46, 70
BpiI GAAGAC 2 cut(s) 267, 289
Bpu10I CCTNAGC 1 cut(s) 181
BpuMI CCSGG 1 cut(s) 70
BsaHI GRCGYC 5 cut(s) 8, 105, 198, 213, 269
BsaJI CCNNGG 2 cut(s) 45, 59
BsaXI ACNNNNNCTCC 2 cut(s) 149, 179
Bsc4I CCNNNNNNNGG 2 cut(s) 45, 194
Bse3DI GCAATG 1 cut(s) 50
BseBI CCWGG 1 cut(s) 46
BseDI CCNNGG 2 cut(s) 45, 59
BseLI CCNNNNNNNGG 2 cut(s) 45, 194
BseMI GCAATG 1 cut(s) 50
BseMII CTCAG 3 cut(s) 32, 195, 346
BseRI GAGGAG 2 cut(s) 31, 157
Bsh1236I CGCG 1 cut(s) 381
BsiSI CCGG 1 cut(s) 70
BslFI GGGAC 2 cut(s) 7, 242
BslI CCNNNNNNNGG 2 cut(s) 45, 194
BsmAI GTCTC 1 cut(s) 146
BsmBI CGTCTC 1 cut(s) 146
BsmFI GGGAC 2 cut(s) 7, 242
Bsp143I GATC 1 cut(s) 72
BspACI CCGC 9 cut(s) 108, 136, 171, 232, 247, 282, 318, 367, 379
BspCNI CTCAG 3 cut(s) 31, 194, 345
BspFNI CGCG 1 cut(s) 381
BspHI TCATGA 1 cut(s) 144
BspLI GGNNCC 2 cut(s) 68, 245
BspPI GGATC 1 cut(s) 80
BsrBI CCGCTC 1 cut(s) 110
BsrDI GCAATG 1 cut(s) 50
BssECI CCNNGG 2 cut(s) 45, 59
BssMI GATC 1 cut(s) 72
BssNI GRCGYC 5 cut(s) 8, 105, 198, 213, 269
BssT1I CCWWGG 1 cut(s) 59
Bst2UI CCWGG 1 cut(s) 46
Bst4CI ACNGT 1 cut(s) 220
BstACI GRCGYC 5 cut(s) 8, 105, 198, 213, 269
BstC8I GCNNGC 2 cut(s) 112, 379
BstDEI CTNAG 3 cut(s) 18, 181, 332
BstFNI CGCG 1 cut(s) 381
BstKTI GATC 1 cut(s) 75
BstMAI GTCTC 1 cut(s) 146
BstMBI GATC 1 cut(s) 72
BstMWI GCNNNNNNNGC 2 cut(s) 324, 333
BstNI CCWGG 1 cut(s) 46
BstSCI CCNGG 2 cut(s) 44, 68
BstUI CGCG 1 cut(s) 381
BstV2I GAAGAC 2 cut(s) 267, 289
BstX2I RGATCY 1 cut(s) 72
BstYI RGATCY 1 cut(s) 72
Cac8I GCNNGC 2 cut(s) 112, 379
CciI TCATGA 1 cut(s) 144
Cfr13I GGNCC 1 cut(s) 66
CseI GACGC 2 cut(s) 113, 187
CviAII CATG 1 cut(s) 145
CviJI RGCY 5 cut(s) 150, 185, 321, 327, 336
CviKI_1 RGCY 5 cut(s) 150, 185, 321, 327, 336
DdeI CTNAG 3 cut(s) 18, 181, 332
DpnI GATC 1 cut(s) 74
DpnII GATC 1 cut(s) 72
DrdI GACNNNNNNGTC 2 cut(s) 10, 218
DseDI GACNNNNNNGTC 2 cut(s) 10, 218
EciI GGCGGA 1 cut(s) 160
Eco130I CCWWGG 1 cut(s) 59
Eco47I GGWCC 1 cut(s) 66
Eco57I CTGAAG 1 cut(s) 307
EcoO109I RGGNCCY 1 cut(s) 66
EcoRII CCWGG 1 cut(s) 44
EcoT14I CCWWGG 1 cut(s) 59
ErhI CCWWGG 1 cut(s) 59
Esp3I CGTCTC 1 cut(s) 146
FaeI CATG 1 cut(s) 148
FaiI YATR 1 cut(s) 146
FaqI GGGAC 2 cut(s) 7, 242
FatI CATG 1 cut(s) 144
FauI CCCGC 3 cut(s) 239, 289, 386
FblI GTMKAC 1 cut(s) 222
Fnu4HI GCNGC 3 cut(s) 108, 319, 367
Fsp4HI GCNGC 3 cut(s) 108, 319, 367
GluI GCNGC 3 cut(s) 108, 319, 367
HapII CCGG 1 cut(s) 70
HgaI GACGC 2 cut(s) 113, 187
Hin1I GRCGYC 5 cut(s) 8, 105, 198, 213, 269
Hin1II CATG 1 cut(s) 148
HincII GTYRAC 2 cut(s) 99, 223
HindII GTYRAC 2 cut(s) 99, 223
HinfI GANTC 2 cut(s) 341, 356
HpaI GTTAAC 1 cut(s) 99
HpaII CCGG 1 cut(s) 70
HphI GGTGA 2 cut(s) 193, 208
Hpy166II GTNNAC 2 cut(s) 99, 223
Hpy188I TCNGA 1 cut(s) 211
Hpy188III TCNNGA 1 cut(s) 145
Hpy8I GTNNAC 2 cut(s) 99, 223
Hpy99I CGWCG 8 cut(s) 10, 13, 215, 224, 271, 274, 317, 397
HpyCH4III ACNGT 1 cut(s) 220
HpyCH4IV ACGT 4 cut(s) 8, 213, 255, 269
HpyF10VI GCNNNNNNNGC 2 cut(s) 324, 333
HpyF3I CTNAG 3 cut(s) 18, 181, 332
HpySE526I ACGT 4 cut(s) 8, 213, 255, 269
Hsp92I GRCGYC 5 cut(s) 8, 105, 198, 213, 269
Hsp92II CATG 1 cut(s) 148
KspAI GTTAAC 1 cut(s) 99
Kzo9I GATC 1 cut(s) 72
LmnI GCTCC 3 cut(s) 60, 170, 190
LpnPI CCDG 4 cut(s) 31, 58, 83, 226
MaeII ACGT 4 cut(s) 8, 213, 255, 269
MaeIII GTNAC 2 cut(s) 199, 214
MalI GATC 1 cut(s) 74
MbiI CCGCTC 1 cut(s) 110
MboI GATC 1 cut(s) 72
MboII GAAGA 3 cut(s) 267, 289, 298
MflI RGATCY 1 cut(s) 72
MluCI AATT 1 cut(s) 371
MlyI GAGTC 2 cut(s) 335, 350
MmeI TCCRAC 1 cut(s) 234
MseI TTAA 1 cut(s) 98
MspI CCGG 1 cut(s) 70
MspR9I CCNGG 2 cut(s) 46, 70
MvaI CCWGG 1 cut(s) 46
MvnI CGCG 1 cut(s) 381
MwoI GCNNNNNNNGC 2 cut(s) 324, 333
NciI CCSGG 1 cut(s) 70
NdeII GATC 1 cut(s) 72
NlaIII CATG 1 cut(s) 148
NlaIV GGNNCC 2 cut(s) 68, 245
NmuCI GTSAC 2 cut(s) 199, 214
PagI TCATGA 1 cut(s) 144
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PflFI GACNNNGTC 4 cut(s) 7, 10, 271, 359
PkrI GCNGC 3 cut(s) 109, 320, 368
PleI GAGTC 2 cut(s) 335, 350
PpsI GAGTC 2 cut(s) 335, 350
PpuMI RGGWCCY 1 cut(s) 66
Psp5II RGGWCCY 1 cut(s) 66
Psp6I CCWGG 1 cut(s) 44
PspGI CCWGG 1 cut(s) 44
PspN4I GGNNCC 2 cut(s) 68, 245
PspPI GGNCC 1 cut(s) 66
PspPPI RGGWCCY 1 cut(s) 66
PsuI RGATCY 1 cut(s) 72
PsyI GACNNNGTC 4 cut(s) 7, 10, 271, 359
SalI GTCGAC 1 cut(s) 221
SaqAI TTAA 1 cut(s) 98
SatI GCNGC 3 cut(s) 108, 319, 367
Sau3AI GATC 1 cut(s) 72
Sau96I GGNCC 1 cut(s) 66
SchI GAGTC 2 cut(s) 335, 350
ScrFI CCNGG 2 cut(s) 46, 70
SetI ASST 9 cut(s) 11, 152, 187, 209, 216, 240, 258, 272, 329
SinI GGWCC 1 cut(s) 66
Sse9I AATT 1 cut(s) 371
SsiI CCGC 9 cut(s) 108, 136, 171, 232, 247, 282, 318, 367, 379
StyD4I CCNGG 2 cut(s) 44, 68
StyI CCWWGG 1 cut(s) 59
TaaI ACNGT 1 cut(s) 220
TaiI ACGT 4 cut(s) 11, 216, 258, 272
TaqI TCGA 2 cut(s) 123, 222
TasI AATT 1 cut(s) 371
TauI GCSGC 3 cut(s) 110, 321, 369
Tru1I TTAA 1 cut(s) 98
Tru9I TTAA 1 cut(s) 98
TseFI GTSAC 2 cut(s) 199, 214
Tsp45I GTSAC 2 cut(s) 199, 214
TspGWI ACGGA 2 cut(s) 116, 349
Tth111I GACNNNGTC 4 cut(s) 7, 10, 271, 359
VpaK11BI GGWCC 1 cut(s) 66
XapI RAATTY 1 cut(s) 371
XmiI GTMKAC 1 cut(s) 222
ZraI GACGTC 3 cut(s) 9, 214, 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.