Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g06051 FvH4_4g12771 |
| rosa_laevigata | RLG00000003317 RLG00000003318 |
| rosa_multiflora | Rmu_sc0003652.1_g000002 Rmu_sc0005065.1_g000016 |
| rosa_roxburghii | Rroxscaffold_3G00251590 |
| rosa_samantha | Rh7AG228500 Rh7BG224900 Rh7CG243100 Rh7CG243200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 390 |
| AcuI | CTGAAG | 1 cut(s) | 29 |
| AgsI | TTSAA | 2 cut(s) | 193, 348 |
| AluBI | AGCT | 3 cut(s) | 7, 13, 319 |
| AluI | AGCT | 3 cut(s) | 7, 13, 319 |
| Alw26I | GTCTC | 1 cut(s) | 78 |
| AsuHPI | GGTGA | 1 cut(s) | 316 |
| BbsI | GAAGAC | 1 cut(s) | 200 |
| BccI | CCATC | 3 cut(s) | 205, 271, 325 |
| BclI | TGATCA | 1 cut(s) | 162 |
| BcoDI | GTCTC | 1 cut(s) | 78 |
| BglII | AGATCT | 1 cut(s) | 205 |
| BmiI | GGNNCC | 1 cut(s) | 267 |
| BmsI | GCATC | 1 cut(s) | 9 |
| BoxI | GACNNNNGTC | 1 cut(s) | 39 |
| BpiI | GAAGAC | 1 cut(s) | 200 |
| BpmI | CTGGAG | 1 cut(s) | 335 |
| BsaBI | GATNNNNATC | 1 cut(s) | 167 |
| Bse3DI | GCAATG | 1 cut(s) | 97 |
| Bse8I | GATNNNNATC | 1 cut(s) | 167 |
| BseJI | GATNNNNATC | 1 cut(s) | 167 |
| BseMI | GCAATG | 1 cut(s) | 97 |
| BseMII | CTCAG | 1 cut(s) | 311 |
| BsmAI | GTCTC | 1 cut(s) | 78 |
| Bsp143I | GATC | 2 cut(s) | 162, 205 |
| BspCNI | CTCAG | 1 cut(s) | 312 |
| BspLI | GGNNCC | 1 cut(s) | 267 |
| BsrDI | GCAATG | 1 cut(s) | 97 |
| BssMI | GATC | 2 cut(s) | 162, 205 |
| Bst4CI | ACNGT | 2 cut(s) | 70, 185 |
| BstC8I | GCNNGC | 1 cut(s) | 24 |
| BstDEI | CTNAG | 1 cut(s) | 320 |
| BstKTI | GATC | 2 cut(s) | 165, 208 |
| BstMAI | GTCTC | 1 cut(s) | 78 |
| BstMBI | GATC | 2 cut(s) | 162, 205 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 19 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 39 |
| BstV2I | GAAGAC | 1 cut(s) | 200 |
| BstX2I | RGATCY | 1 cut(s) | 205 |
| BstYI | RGATCY | 1 cut(s) | 205 |
| BtsIMutI | CAGTG | 1 cut(s) | 190 |
| Cac8I | GCNNGC | 1 cut(s) | 24 |
| CviAII | CATG | 1 cut(s) | 175 |
| CviJI | RGCY | 5 cut(s) | 7, 13, 103, 149, 319 |
| CviKI_1 | RGCY | 5 cut(s) | 7, 13, 103, 149, 319 |
| DdeI | CTNAG | 1 cut(s) | 320 |
| DpnI | GATC | 2 cut(s) | 164, 207 |
| DpnII | GATC | 2 cut(s) | 162, 205 |
| Eco57I | CTGAAG | 1 cut(s) | 29 |
| FaeI | CATG | 1 cut(s) | 178 |
| FaiI | YATR | 6 cut(s) | 137, 146, 161, 176, 373, 390 |
| FatI | CATG | 1 cut(s) | 174 |
| FbaI | TGATCA | 1 cut(s) | 162 |
| GsuI | CTGGAG | 1 cut(s) | 335 |
| Hin1II | CATG | 1 cut(s) | 178 |
| HindIII | AAGCTT | 1 cut(s) | 11 |
| HinfI | GANTC | 5 cut(s) | 168, 247, 271, 310, 364 |
| HphI | GGTGA | 1 cut(s) | 316 |
| Hpy166II | GTNNAC | 1 cut(s) | 34 |
| Hpy188I | TCNGA | 5 cut(s) | 18, 167, 210, 276, 330 |
| Hpy188III | TCNNGA | 2 cut(s) | 44, 314 |
| Hpy8I | GTNNAC | 1 cut(s) | 34 |
| HpyAV | CCTTC | 2 cut(s) | 226, 295 |
| HpyCH4III | ACNGT | 2 cut(s) | 70, 185 |
| HpyCH4V | TGCA | 2 cut(s) | 26, 90 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 19 |
| HpyF3I | CTNAG | 1 cut(s) | 320 |
| Hsp92II | CATG | 1 cut(s) | 178 |
| Ksp22I | TGATCA | 1 cut(s) | 162 |
| Kzo9I | GATC | 2 cut(s) | 162, 205 |
| LmnI | GCTCC | 2 cut(s) | 4, 316 |
| LpnPI | CCDG | 2 cut(s) | 57, 299 |
| LweI | GCATC | 1 cut(s) | 9 |
| MalI | GATC | 2 cut(s) | 164, 207 |
| MboI | GATC | 2 cut(s) | 162, 205 |
| MboII | GAAGA | 5 cut(s) | 205, 215, 250, 319, 373 |
| MflI | RGATCY | 1 cut(s) | 205 |
| MluCI | AATT | 2 cut(s) | 122, 391 |
| MlyI | GAGTC | 1 cut(s) | 265 |
| MmeI | TCCRAC | 1 cut(s) | 392 |
| MnlI | CCTC | 2 cut(s) | 237, 256 |
| MseI | TTAA | 2 cut(s) | 54, 394 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 19 |
| NdeII | GATC | 2 cut(s) | 162, 205 |
| NlaIII | CATG | 1 cut(s) | 178 |
| NlaIV | GGNNCC | 1 cut(s) | 267 |
| PfeI | GAWTC | 4 cut(s) | 168, 247, 310, 364 |
| PflFI | GACNNNGTC | 1 cut(s) | 70 |
| PleI | GAGTC | 1 cut(s) | 265 |
| PpsI | GAGTC | 1 cut(s) | 265 |
| PshAI | GACNNNNGTC | 1 cut(s) | 39 |
| PsiI | TTATAA | 1 cut(s) | 390 |
| PspN4I | GGNNCC | 1 cut(s) | 267 |
| PsuI | RGATCY | 1 cut(s) | 205 |
| PsyI | GACNNNGTC | 1 cut(s) | 70 |
| SaqAI | TTAA | 2 cut(s) | 54, 394 |
| Sau3AI | GATC | 2 cut(s) | 162, 205 |
| SchI | GAGTC | 1 cut(s) | 265 |
| SetI | ASST | 4 cut(s) | 9, 15, 306, 321 |
| SfaNI | GCATC | 1 cut(s) | 9 |
| SgeI | CNNG | 8 cut(s) | 35, 41, 56, 61, 116, 129, 187, 326 |
| Sse9I | AATT | 2 cut(s) | 122, 391 |
| TaaI | ACNGT | 2 cut(s) | 70, 185 |
| TaqI | TCGA | 2 cut(s) | 65, 96 |
| TasI | AATT | 2 cut(s) | 122, 391 |
| TfiI | GAWTC | 4 cut(s) | 168, 247, 310, 364 |
| Tru1I | TTAA | 2 cut(s) | 54, 394 |
| Tru9I | TTAA | 2 cut(s) | 54, 394 |
| TscAI | CASTG | 1 cut(s) | 190 |
| TspRI | CASTG | 1 cut(s) | 190 |
| Tth111I | GACNNNGTC | 1 cut(s) | 70 |