Rmu_sc0003697.1_g000001

Protein MON2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003697.1
OG0025568
Physical Location & Seq
Reverse (-)
1 .. 5652
5652 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003697.1_g000001.1.cds

Sequence Viewer

Length: 894 bp
atgaccgatgagagtgttcaacttaagaccctgcagactgtattgataatattgcagtcacctttacaccctcagaatgaggacgatatggctcaagctcttggtatatgccttcggcttctcgaaaataggtcccctgacagtgtgcgcaatactgctgcagctactttcaggcaagctgtagcactgatttttgatcatgtggtttgcgctgagactcttcctgccggcaagcttagttctggaggttacatctctcggaccagtccagttagtggtgatgttagttgcagcataaatctttcagagtctttggatggatctgtttctggacagtcatcattgatgagggagacactaactaaagctggaaagcttgggcttcgtctgcttgaagacctgacagctcttgctgcaggtggatctgcaatctggttacgtgtcagttctctacagcggtcctttgcacttgacatactggagtttgttctgtccaactatgtggctgttttccgaaccttgcttccttatgagcaggtcctgcgttaccagatatgttcaattctaatgacctcacttcgtacaaatgcggagcttgaaggggaagcaggagagccgtcatttcgacgcttggtcttgcggtcagttgcccatatcatccggctttacagttcatcccttatcactgaatgtgaggtcttccttagtatgttggtgaaggtcacatttcttgatttgccattatggcatcgtattcttgttcttgagatcctgaggggcttttgtgtggaggcaaggacattgcggattcttttccgaaactttgatatgaatcccaagaacaccaacgttgtggagggcatggtgaaagctcttgctagagtagtttcaagt
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DCB DUF1981 Mon2_C Sec7_N

Protein Analysis

298

Amino Acids

32.87

Weight (kDa)

6.91

Isoelectric Point (pI)

54.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0025568)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0003697.1_g000001 Rmu_sc0020609.1_g000001 Rmu_sc0020610.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 407
Acc16I TGCGCA 1 cut(s) 149
Acc36I ACCTGC 2 cut(s) 407, 526
AccB7I CCANNNNNTGG 1 cut(s) 275
AciI CCGC 4 cut(s) 457, 590, 640, 805
AclI AACGTT 1 cut(s) 849
AclWI GGATC 3 cut(s) 328, 430, 763
AfaI GTAC 1 cut(s) 583
AfiI CCNNNNNNNGG 1 cut(s) 275
AflII CTTAAG 1 cut(s) 23
AflIII ACRYGT 1 cut(s) 439
AgsI TTSAA 5 cut(s) 20, 395, 561, 599, 891
AhdI GACNNNNNGTC 1 cut(s) 632
AloI GAACNNNNNNTCC 2 cut(s) 508, 540
AluBI AGCT 9 cut(s) 98, 164, 179, 235, 368, 376, 407, 595, 872
AluI AGCT 9 cut(s) 98, 164, 179, 235, 368, 376, 407, 595, 872
Alw26I GTCTC 2 cut(s) 209, 347
AlwI GGATC 3 cut(s) 328, 430, 763
AlwNI CAGNNNCTG 1 cut(s) 541
ApeKI GCWGC 4 cut(s) 158, 161, 291, 413
AspLEI GCGC 2 cut(s) 150, 212
AspS9I GGNCC 4 cut(s) 132, 261, 459, 538
AsuHPI GGTGA 4 cut(s) 51, 290, 727, 877
AvaII GGWCC 4 cut(s) 132, 261, 459, 538
AxyI CCTNAGG 1 cut(s) 773
BbsI GAAGAC 2 cut(s) 402, 691
BbvI GCAGC 4 cut(s) 145, 173, 303, 400
BccI CCATC 1 cut(s) 311
BceAI ACGGC 1 cut(s) 601
BclI TGATCA 1 cut(s) 196
BcoDI GTCTC 2 cut(s) 209, 347
BfaI CTAG 1 cut(s) 879
BfmI CTRYAG 5 cut(s) 32, 159, 180, 414, 452
BfrI CTTAAG 1 cut(s) 23
BfuAI ACCTGC 2 cut(s) 407, 526
BglI GCCNNNNNGGC 1 cut(s) 745
BisI GCNGC 4 cut(s) 159, 162, 292, 414
BlsI GCNGC 4 cut(s) 160, 163, 293, 415
Bme18I GGWCC 4 cut(s) 132, 261, 459, 538
BmeRI GACNNNNNGTC 1 cut(s) 632
BmgT120I GGNCC 4 cut(s) 132, 261, 459, 538
BmiI GGNNCC 1 cut(s) 134
BmsI GCATC 1 cut(s) 757
BpiI GAAGAC 2 cut(s) 402, 691
BpmI CTGGAG 2 cut(s) 264, 500
BpuEI CTTGAG 2 cut(s) 78, 785
BsaAI YACGTR 1 cut(s) 440
BsaBI GATNNNNATC 1 cut(s) 831
Bsc4I CCNNNNNNNGG 1 cut(s) 275
Bse118I RCCGGY 1 cut(s) 227
Bse1I ACTGG 3 cut(s) 264, 269, 483
Bse21I CCTNAGG 1 cut(s) 773
Bse3DI GCAATG 1 cut(s) 800
Bse8I GATNNNNATC 1 cut(s) 831
BseGI GGATG 3 cut(s) 322, 657, 674
BseJI GATNNNNATC 1 cut(s) 831
BseLI CCNNNNNNNGG 1 cut(s) 275
BseMI GCAATG 1 cut(s) 800
BseMII CTCAG 3 cut(s) 86, 204, 764
BseNI ACTGG 3 cut(s) 264, 269, 483
BseXI GCAGC 4 cut(s) 145, 173, 303, 400
BsiSI CCGG 2 cut(s) 228, 661
BslFI GGGAC 1 cut(s) 118
BslI CCNNNNNNNGG 1 cut(s) 275
BsmAI GTCTC 2 cut(s) 209, 347
BsmFI GGGAC 1 cut(s) 118
Bsp143I GATC 4 cut(s) 196, 320, 422, 768
BspACI CCGC 4 cut(s) 457, 590, 640, 805
BspCNI CTCAG 3 cut(s) 85, 205, 765
BspLI GGNNCC 1 cut(s) 134
BspMAI CTGCAG 3 cut(s) 36, 163, 418
BspMI ACCTGC 2 cut(s) 407, 526
BspPI GGATC 3 cut(s) 328, 430, 763
BspTI CTTAAG 1 cut(s) 23
BsrDI GCAATG 1 cut(s) 800
BsrFI RCCGGY 1 cut(s) 227
BsrI ACTGG 3 cut(s) 264, 269, 483
BssAI RCCGGY 1 cut(s) 227
BssMI GATC 4 cut(s) 196, 320, 422, 768
Bst4CI ACNGT 4 cut(s) 40, 143, 336, 671
Bst6I CTCTTC 1 cut(s) 225
BstAFI CTTAAG 1 cut(s) 23
BstAPI GCANNNNNTGC 1 cut(s) 541
BstBAI YACGTR 1 cut(s) 440
BstC8I GCNNGC 3 cut(s) 177, 229, 233
BstDEI CTNAG 5 cut(s) 72, 213, 236, 704, 773
BstF5I GGATG 3 cut(s) 322, 657, 674
BstHHI GCGC 2 cut(s) 150, 212
BstKTI GATC 4 cut(s) 199, 323, 425, 771
BstMAI GTCTC 2 cut(s) 209, 347
BstMBI GATC 4 cut(s) 196, 320, 422, 768
BstMWI GCNNNNNNNGC 4 cut(s) 388, 413, 541, 745
BstSFI CTRYAG 5 cut(s) 32, 159, 180, 414, 452
BstV1I GCAGC 4 cut(s) 145, 173, 303, 400
BstV2I GAAGAC 2 cut(s) 402, 691
BstX2I RGATCY 3 cut(s) 320, 422, 768
BstXI CCANNNNNNTGG 2 cut(s) 502, 853
BstYI RGATCY 3 cut(s) 320, 422, 768
Bsu36I CCTNAGG 1 cut(s) 773
BtsCI GGATG 3 cut(s) 322, 657, 674
BtsIMutI CAGTG 3 cut(s) 148, 185, 684
BveI ACCTGC 2 cut(s) 407, 526
Cac8I GCNNGC 3 cut(s) 177, 229, 233
CaiI CAGNNNCTG 1 cut(s) 541
CfoI GCGC 2 cut(s) 150, 212
Cfr10I RCCGGY 1 cut(s) 227
Cfr13I GGNCC 4 cut(s) 132, 261, 459, 538
CseI GACGC 1 cut(s) 636
Csp6I GTAC 1 cut(s) 582
CviAII CATG 2 cut(s) 200, 862
CviQI GTAC 1 cut(s) 582
DdeI CTNAG 5 cut(s) 72, 213, 236, 704, 773
DpnI GATC 4 cut(s) 198, 322, 424, 770
DpnII GATC 4 cut(s) 196, 320, 422, 768
DriI GACNNNNNGTC 1 cut(s) 632
Eam1104I CTCTTC 1 cut(s) 225
Eam1105I GACNNNNNGTC 1 cut(s) 632
EarI CTCTTC 1 cut(s) 225
Eco47I GGWCC 4 cut(s) 132, 261, 459, 538
Eco81I CCTNAGG 1 cut(s) 773
EcoO109I RGGNCCY 2 cut(s) 132, 538
FaeI CATG 2 cut(s) 203, 865
FaqI GGGAC 1 cut(s) 118
FatI CATG 2 cut(s) 199, 861
FbaI TGATCA 1 cut(s) 196
Fnu4HI GCNGC 4 cut(s) 159, 162, 292, 414
FokI GGATG 3 cut(s) 329, 644, 661
Fsp4HI GCNGC 4 cut(s) 159, 162, 292, 414
FspBI CTAG 1 cut(s) 879
FspI TGCGCA 1 cut(s) 149
GlaI GCGC 2 cut(s) 149, 211
GluI GCNGC 4 cut(s) 159, 162, 292, 414
GsuI CTGGAG 2 cut(s) 264, 500
HapII CCGG 2 cut(s) 228, 661
HgaI GACGC 1 cut(s) 636
HhaI GCGC 2 cut(s) 150, 212
Hin1II CATG 2 cut(s) 203, 865
Hin6I GCGC 2 cut(s) 148, 210
HinP1I GCGC 2 cut(s) 148, 210
HindIII AAGCTT 2 cut(s) 233, 374
HinfI GANTC 4 cut(s) 217, 308, 808, 832
HpaII CCGG 2 cut(s) 228, 661
HphI GGTGA 4 cut(s) 51, 290, 727, 877
Hpy188I TCNGA 5 cut(s) 75, 261, 307, 515, 818
Hpy188III TCNNGA 6 cut(s) 122, 243, 330, 731, 764, 772
Hpy99I CGWCG 1 cut(s) 630
HpyAV CCTTC 3 cut(s) 122, 593, 712
HpyCH4III ACNGT 4 cut(s) 40, 143, 336, 671
HpyCH4IV ACGT 2 cut(s) 439, 849
HpyCH4V TGCA 7 cut(s) 34, 55, 161, 291, 416, 428, 467
HpyF10VI GCNNNNNNNGC 4 cut(s) 388, 413, 541, 745
HpyF3I CTNAG 5 cut(s) 72, 213, 236, 704, 773
HpySE526I ACGT 2 cut(s) 439, 849
Hsp92II CATG 2 cut(s) 203, 865
HspAI GCGC 2 cut(s) 148, 210
KroI GCCGGC 1 cut(s) 227
KroNI GCCGGC 1 cut(s) 229
Ksp22I TGATCA 1 cut(s) 196
Kzo9I GATC 4 cut(s) 196, 320, 422, 768
LmnI GCTCC 1 cut(s) 592
Lsp1109I GCAGC 4 cut(s) 145, 173, 303, 400
LweI GCATC 1 cut(s) 757
MaeI CTAG 1 cut(s) 879
MaeII ACGT 2 cut(s) 439, 849
MaeIII GTNAC 5 cut(s) 57, 248, 435, 545, 721
MalI GATC 4 cut(s) 198, 322, 424, 770
MboI GATC 4 cut(s) 196, 320, 422, 768
MboII GAAGA 3 cut(s) 212, 407, 691
MflI RGATCY 3 cut(s) 320, 422, 768
MluCI AATT 1 cut(s) 561
MlyI GAGTC 2 cut(s) 211, 317
MmeI TCCRAC 1 cut(s) 519
MnlI CCTC 9 cut(s) 73, 81, 239, 342, 583, 688, 768, 784, 850
MroNI GCCGGC 1 cut(s) 227
MseI TTAA 1 cut(s) 24
MspA1I CMGCKG 1 cut(s) 457
MspCI CTTAAG 1 cut(s) 23
MspI CCGG 2 cut(s) 228, 661
MwoI GCNNNNNNNGC 4 cut(s) 388, 413, 541, 745
NaeI GCCGGC 1 cut(s) 229
NdeII GATC 4 cut(s) 196, 320, 422, 768
NgoMIV GCCGGC 1 cut(s) 227
NlaIII CATG 2 cut(s) 203, 865
NlaIV GGNNCC 1 cut(s) 134
NmuCI GTSAC 2 cut(s) 57, 721
NsbI TGCGCA 1 cut(s) 149
PaqCI CACCTGC 1 cut(s) 407
PdiI GCCGGC 1 cut(s) 229
PfeI GAWTC 2 cut(s) 808, 832
PflMI CCANNNNNTGG 1 cut(s) 275
PkrI GCNGC 4 cut(s) 160, 163, 293, 415
PleI GAGTC 2 cut(s) 211, 316
PpsI GAGTC 2 cut(s) 211, 316
Ppu21I YACGTR 1 cut(s) 440
PpuMI RGGWCCY 2 cut(s) 132, 538
Psp1406I AACGTT 1 cut(s) 849
Psp5II RGGWCCY 2 cut(s) 132, 538
PspN4I GGNNCC 1 cut(s) 134
PspPI GGNCC 4 cut(s) 132, 261, 459, 538
PspPPI RGGWCCY 2 cut(s) 132, 538
PstI CTGCAG 3 cut(s) 36, 163, 418
PstNI CAGNNNCTG 1 cut(s) 541
PsuI RGATCY 3 cut(s) 320, 422, 768
RsaI GTAC 1 cut(s) 583
RsaNI GTAC 1 cut(s) 582
SaqAI TTAA 1 cut(s) 24
SatI GCNGC 4 cut(s) 159, 162, 292, 414
Sau3AI GATC 4 cut(s) 196, 320, 422, 768
Sau96I GGNCC 4 cut(s) 132, 261, 459, 538
SchI GAGTC 2 cut(s) 211, 317
SfaNI GCATC 1 cut(s) 757
SfcI CTRYAG 5 cut(s) 32, 159, 180, 414, 452
SinI GGWCC 4 cut(s) 132, 261, 459, 538
SmlI CTYRAG 3 cut(s) 23, 93, 764
SmoI CTYRAG 3 cut(s) 23, 93, 764
Sse9I AATT 1 cut(s) 561
SsiI CCGC 4 cut(s) 457, 590, 640, 805
SspI AATATT 1 cut(s) 51
SspMI CTAG 1 cut(s) 879
TaaI ACNGT 4 cut(s) 40, 143, 336, 671
TaiI ACGT 2 cut(s) 442, 852
TaqI TCGA 2 cut(s) 123, 625
TaqII GACCGA 1 cut(s) 20
TasI AATT 1 cut(s) 561
TfiI GAWTC 2 cut(s) 808, 832
Tru1I TTAA 1 cut(s) 24
Tru9I TTAA 1 cut(s) 24
TscAI CASTG 3 cut(s) 148, 192, 691
TseFI GTSAC 2 cut(s) 57, 721
TseI GCWGC 4 cut(s) 158, 161, 291, 413
Tsp45I GTSAC 2 cut(s) 57, 721
TspDTI ATGAA 2 cut(s) 663, 845
TspRI CASTG 3 cut(s) 148, 192, 691
Van91I CCANNNNNTGG 1 cut(s) 275
Vha464I CTTAAG 1 cut(s) 23
VpaK11BI GGWCC 4 cut(s) 132, 261, 459, 538
XspI CTAG 1 cut(s) 879
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.