Rmu_sc0020610.1_g000001

Protein MON2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020610.1
OG0025568
Physical Location & Seq
Forward (+)
1 .. 937
937 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020610.1_g000001.1.cds

Sequence Viewer

Length: 393 bp
gacgatatggctcaagctcttggtatatgccttcggcttctcgaaaataggtcccctgacagtgtgcgcaatactgctgcagctactttcaggcaagctgtagcactgatttttgatcatgtggtttgcgctgagactcttcctgccggcaagcttagttctggaggttacatctctcggaccagtccagttagtggtgatgttagttgcagcataaatctttcagagtctttggatggatctgtttctggacagtcatcattgatgagggagacactaactaaagctggaaagcttgggcttcgtctgcttgaagacctgacagctcttgctgcaggtggatctgtatgtgctgatttaaaagttattcataaagtttccttagaaccataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DCB DUF1981 Mon2_C Sec7_N

Protein Analysis

130

Amino Acids

13.49

Weight (kDa)

5.61

Isoelectric Point (pI)

48.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0025568)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0003697.1_g000001 Rmu_sc0020609.1_g000001 Rmu_sc0020610.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 326
Acc16I TGCGCA 1 cut(s) 68
Acc36I ACCTGC 1 cut(s) 326
AccB7I CCANNNNNTGG 1 cut(s) 194
AclWI GGATC 2 cut(s) 247, 349
AfiI CCNNNNNNNGG 1 cut(s) 194
AgsI TTSAA 1 cut(s) 314
AluBI AGCT 7 cut(s) 17, 83, 98, 154, 287, 295, 326
AluI AGCT 7 cut(s) 17, 83, 98, 154, 287, 295, 326
Alw26I GTCTC 2 cut(s) 128, 266
AlwI GGATC 2 cut(s) 247, 349
ApeKI GCWGC 4 cut(s) 77, 80, 210, 332
AspLEI GCGC 2 cut(s) 69, 131
AspS9I GGNCC 2 cut(s) 51, 180
AsuHPI GGTGA 1 cut(s) 209
AvaII GGWCC 2 cut(s) 51, 180
BbsI GAAGAC 1 cut(s) 321
BbvI GCAGC 4 cut(s) 64, 92, 222, 319
BccI CCATC 1 cut(s) 230
BclI TGATCA 1 cut(s) 115
BcoDI GTCTC 2 cut(s) 128, 266
BfmI CTRYAG 3 cut(s) 78, 99, 333
BfuAI ACCTGC 1 cut(s) 326
BisI GCNGC 4 cut(s) 78, 81, 211, 333
BlsI GCNGC 4 cut(s) 79, 82, 212, 334
Bme18I GGWCC 2 cut(s) 51, 180
BmgT120I GGNCC 2 cut(s) 51, 180
BmiI GGNNCC 1 cut(s) 53
BpiI GAAGAC 1 cut(s) 321
BpmI CTGGAG 1 cut(s) 183
Bsc4I CCNNNNNNNGG 1 cut(s) 194
Bse118I RCCGGY 1 cut(s) 146
Bse1I ACTGG 2 cut(s) 183, 188
BseGI GGATG 1 cut(s) 241
BseLI CCNNNNNNNGG 1 cut(s) 194
BseMII CTCAG 1 cut(s) 123
BseNI ACTGG 2 cut(s) 183, 188
BseXI GCAGC 4 cut(s) 64, 92, 222, 319
BsiSI CCGG 1 cut(s) 147
BslFI GGGAC 1 cut(s) 37
BslI CCNNNNNNNGG 1 cut(s) 194
BsmAI GTCTC 2 cut(s) 128, 266
BsmFI GGGAC 1 cut(s) 37
Bsp143I GATC 3 cut(s) 115, 239, 341
BspCNI CTCAG 1 cut(s) 124
BspLI GGNNCC 1 cut(s) 53
BspMAI CTGCAG 2 cut(s) 82, 337
BspMI ACCTGC 1 cut(s) 326
BspPI GGATC 2 cut(s) 247, 349
BsrFI RCCGGY 1 cut(s) 146
BsrI ACTGG 2 cut(s) 183, 188
BssAI RCCGGY 1 cut(s) 146
BssMI GATC 3 cut(s) 115, 239, 341
Bst4CI ACNGT 2 cut(s) 62, 255
Bst6I CTCTTC 1 cut(s) 144
BstC8I GCNNGC 3 cut(s) 96, 148, 152
BstDEI CTNAG 3 cut(s) 132, 155, 382
BstF5I GGATG 1 cut(s) 241
BstHHI GCGC 2 cut(s) 69, 131
BstKTI GATC 3 cut(s) 118, 242, 344
BstMAI GTCTC 2 cut(s) 128, 266
BstMBI GATC 3 cut(s) 115, 239, 341
BstMWI GCNNNNNNNGC 2 cut(s) 307, 332
BstSFI CTRYAG 3 cut(s) 78, 99, 333
BstV1I GCAGC 4 cut(s) 64, 92, 222, 319
BstV2I GAAGAC 1 cut(s) 321
BstX2I RGATCY 2 cut(s) 239, 341
BstYI RGATCY 2 cut(s) 239, 341
BtsCI GGATG 1 cut(s) 241
BtsIMutI CAGTG 2 cut(s) 67, 104
BveI ACCTGC 1 cut(s) 326
Cac8I GCNNGC 3 cut(s) 96, 148, 152
CfoI GCGC 2 cut(s) 69, 131
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 2 cut(s) 51, 180
CviAII CATG 1 cut(s) 119
DdeI CTNAG 3 cut(s) 132, 155, 382
DpnI GATC 3 cut(s) 117, 241, 343
DpnII GATC 3 cut(s) 115, 239, 341
DraI TTTAAA 1 cut(s) 360
Eam1104I CTCTTC 1 cut(s) 144
EarI CTCTTC 1 cut(s) 144
Eco47I GGWCC 2 cut(s) 51, 180
EcoO109I RGGNCCY 1 cut(s) 51
FaeI CATG 1 cut(s) 122
FaiI YATR 8 cut(s) 8, 26, 28, 120, 215, 349, 372, 391
FaqI GGGAC 1 cut(s) 37
FatI CATG 1 cut(s) 118
FbaI TGATCA 1 cut(s) 115
Fnu4HI GCNGC 4 cut(s) 78, 81, 211, 333
FokI GGATG 1 cut(s) 248
Fsp4HI GCNGC 4 cut(s) 78, 81, 211, 333
FspI TGCGCA 1 cut(s) 68
GlaI GCGC 2 cut(s) 68, 130
GluI GCNGC 4 cut(s) 78, 81, 211, 333
GsuI CTGGAG 1 cut(s) 183
HapII CCGG 1 cut(s) 147
HhaI GCGC 2 cut(s) 69, 131
Hin1II CATG 1 cut(s) 122
Hin6I GCGC 2 cut(s) 67, 129
HinP1I GCGC 2 cut(s) 67, 129
HindIII AAGCTT 2 cut(s) 152, 293
HinfI GANTC 2 cut(s) 136, 227
HpaII CCGG 1 cut(s) 147
HphI GGTGA 1 cut(s) 209
Hpy188I TCNGA 2 cut(s) 180, 226
Hpy188III TCNNGA 3 cut(s) 41, 162, 249
HpyAV CCTTC 1 cut(s) 41
HpyCH4III ACNGT 2 cut(s) 62, 255
HpyCH4V TGCA 3 cut(s) 80, 210, 335
HpyF10VI GCNNNNNNNGC 2 cut(s) 307, 332
HpyF3I CTNAG 3 cut(s) 132, 155, 382
Hsp92II CATG 1 cut(s) 122
HspAI GCGC 2 cut(s) 67, 129
KroI GCCGGC 1 cut(s) 146
KroNI GCCGGC 1 cut(s) 148
Ksp22I TGATCA 1 cut(s) 115
Kzo9I GATC 3 cut(s) 115, 239, 341
Lsp1109I GCAGC 4 cut(s) 64, 92, 222, 319
MaeIII GTNAC 1 cut(s) 167
MalI GATC 3 cut(s) 117, 241, 343
MboI GATC 3 cut(s) 115, 239, 341
MboII GAAGA 2 cut(s) 131, 326
MflI RGATCY 2 cut(s) 239, 341
MlyI GAGTC 2 cut(s) 130, 236
MnlI CCTC 2 cut(s) 158, 261
MroNI GCCGGC 1 cut(s) 146
MseI TTAA 1 cut(s) 359
MspI CCGG 1 cut(s) 147
MwoI GCNNNNNNNGC 2 cut(s) 307, 332
NaeI GCCGGC 1 cut(s) 148
NdeII GATC 3 cut(s) 115, 239, 341
NgoMIV GCCGGC 1 cut(s) 146
NlaIII CATG 1 cut(s) 122
NlaIV GGNNCC 1 cut(s) 53
NsbI TGCGCA 1 cut(s) 68
PaqCI CACCTGC 1 cut(s) 326
PdiI GCCGGC 1 cut(s) 148
PflMI CCANNNNNTGG 1 cut(s) 194
PkrI GCNGC 4 cut(s) 79, 82, 212, 334
PleI GAGTC 2 cut(s) 130, 235
PpsI GAGTC 2 cut(s) 130, 235
PpuMI RGGWCCY 1 cut(s) 51
Psp5II RGGWCCY 1 cut(s) 51
PspN4I GGNNCC 1 cut(s) 53
PspPI GGNCC 2 cut(s) 51, 180
PspPPI RGGWCCY 1 cut(s) 51
PstI CTGCAG 2 cut(s) 82, 337
PsuI RGATCY 2 cut(s) 239, 341
SaqAI TTAA 1 cut(s) 359
SatI GCNGC 4 cut(s) 78, 81, 211, 333
Sau3AI GATC 3 cut(s) 115, 239, 341
Sau96I GGNCC 2 cut(s) 51, 180
SchI GAGTC 2 cut(s) 130, 236
SfcI CTRYAG 3 cut(s) 78, 99, 333
SinI GGWCC 2 cut(s) 51, 180
SmlI CTYRAG 1 cut(s) 12
SmoI CTYRAG 1 cut(s) 12
TaaI ACNGT 2 cut(s) 62, 255
TaqI TCGA 1 cut(s) 42
Tru1I TTAA 1 cut(s) 359
Tru9I TTAA 1 cut(s) 359
TscAI CASTG 2 cut(s) 67, 111
TseI GCWGC 4 cut(s) 77, 80, 210, 332
TspDTI ATGAA 1 cut(s) 359
TspRI CASTG 2 cut(s) 67, 111
Van91I CCANNNNNTGG 1 cut(s) 194
VpaK11BI GGWCC 2 cut(s) 51, 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.