Rmu_sc0020609.1_g000001

Protein MON2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020609.1
OG0025568
Physical Location & Seq
Forward (+)
929 .. 2090
1162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020609.1_g000001.1.cds

Sequence Viewer

Length: 474 bp
atgaccgatgagagtgttcagcttaagaccctgcagactgtattgataatattgcagtcacctttacaccctcagaatgaggacgatatggctcaagctcttggtatatgccttcggcttctcgaaaataggtcccctgacagtgtgcgcaatactgctgcagctactttcaggcaagctgtagcactgatttttgatcatgtggtttgcgctgagactcttcctgccggcaagcttagttctggaggttacatctctcggaccagtccagttagtggtgatgttagttgcagcataaatctttcagagtctttggatggatctgtttctggacagtcatcattgatgagggagacactaactaaagctggaaagcttgggcttcgtctgcttgaagacctgacagctcttgctgcaggtggatctgtatgtgctgatttaaaagttattcataaagtttccttagaaccataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DCB DUF1981 Mon2_C Sec7_N

Protein Analysis

157

Amino Acids

16.55

Weight (kDa)

5.29

Isoelectric Point (pI)

55.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0025568)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0003697.1_g000001 Rmu_sc0020609.1_g000001 Rmu_sc0020610.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 407
Acc16I TGCGCA 1 cut(s) 149
Acc36I ACCTGC 1 cut(s) 407
AccB7I CCANNNNNTGG 1 cut(s) 275
AclWI GGATC 2 cut(s) 328, 430
AfiI CCNNNNNNNGG 1 cut(s) 275
AflII CTTAAG 1 cut(s) 23
AgsI TTSAA 1 cut(s) 395
AluBI AGCT 8 cut(s) 22, 98, 164, 179, 235, 368, 376, 407
AluI AGCT 8 cut(s) 22, 98, 164, 179, 235, 368, 376, 407
Alw26I GTCTC 2 cut(s) 209, 347
AlwI GGATC 2 cut(s) 328, 430
ApeKI GCWGC 4 cut(s) 158, 161, 291, 413
AspLEI GCGC 2 cut(s) 150, 212
AspS9I GGNCC 2 cut(s) 132, 261
AsuHPI GGTGA 2 cut(s) 51, 290
AvaII GGWCC 2 cut(s) 132, 261
BbsI GAAGAC 1 cut(s) 402
BbvI GCAGC 4 cut(s) 145, 173, 303, 400
BccI CCATC 1 cut(s) 311
BclI TGATCA 1 cut(s) 196
BcoDI GTCTC 2 cut(s) 209, 347
BfmI CTRYAG 4 cut(s) 32, 159, 180, 414
BfrI CTTAAG 1 cut(s) 23
BfuAI ACCTGC 1 cut(s) 407
BisI GCNGC 4 cut(s) 159, 162, 292, 414
BlsI GCNGC 4 cut(s) 160, 163, 293, 415
Bme18I GGWCC 2 cut(s) 132, 261
BmgT120I GGNCC 2 cut(s) 132, 261
BmiI GGNNCC 1 cut(s) 134
BpiI GAAGAC 1 cut(s) 402
BpmI CTGGAG 1 cut(s) 264
BpuEI CTTGAG 1 cut(s) 78
Bsc4I CCNNNNNNNGG 1 cut(s) 275
Bse118I RCCGGY 1 cut(s) 227
Bse1I ACTGG 2 cut(s) 264, 269
BseGI GGATG 1 cut(s) 322
BseLI CCNNNNNNNGG 1 cut(s) 275
BseMII CTCAG 2 cut(s) 86, 204
BseNI ACTGG 2 cut(s) 264, 269
BseXI GCAGC 4 cut(s) 145, 173, 303, 400
BsiSI CCGG 1 cut(s) 228
BslFI GGGAC 1 cut(s) 118
BslI CCNNNNNNNGG 1 cut(s) 275
BsmAI GTCTC 2 cut(s) 209, 347
BsmFI GGGAC 1 cut(s) 118
Bsp143I GATC 3 cut(s) 196, 320, 422
BspCNI CTCAG 2 cut(s) 85, 205
BspLI GGNNCC 1 cut(s) 134
BspMAI CTGCAG 3 cut(s) 36, 163, 418
BspMI ACCTGC 1 cut(s) 407
BspPI GGATC 2 cut(s) 328, 430
BspTI CTTAAG 1 cut(s) 23
BsrFI RCCGGY 1 cut(s) 227
BsrI ACTGG 2 cut(s) 264, 269
BssAI RCCGGY 1 cut(s) 227
BssMI GATC 3 cut(s) 196, 320, 422
Bst4CI ACNGT 3 cut(s) 40, 143, 336
Bst6I CTCTTC 1 cut(s) 225
BstAFI CTTAAG 1 cut(s) 23
BstC8I GCNNGC 3 cut(s) 177, 229, 233
BstDEI CTNAG 4 cut(s) 72, 213, 236, 463
BstF5I GGATG 1 cut(s) 322
BstHHI GCGC 2 cut(s) 150, 212
BstKTI GATC 3 cut(s) 199, 323, 425
BstMAI GTCTC 2 cut(s) 209, 347
BstMBI GATC 3 cut(s) 196, 320, 422
BstMWI GCNNNNNNNGC 2 cut(s) 388, 413
BstSFI CTRYAG 4 cut(s) 32, 159, 180, 414
BstV1I GCAGC 4 cut(s) 145, 173, 303, 400
BstV2I GAAGAC 1 cut(s) 402
BstX2I RGATCY 2 cut(s) 320, 422
BstYI RGATCY 2 cut(s) 320, 422
BtsCI GGATG 1 cut(s) 322
BtsIMutI CAGTG 2 cut(s) 148, 185
BveI ACCTGC 1 cut(s) 407
Cac8I GCNNGC 3 cut(s) 177, 229, 233
CfoI GCGC 2 cut(s) 150, 212
Cfr10I RCCGGY 1 cut(s) 227
Cfr13I GGNCC 2 cut(s) 132, 261
CviAII CATG 1 cut(s) 200
DdeI CTNAG 4 cut(s) 72, 213, 236, 463
DpnI GATC 3 cut(s) 198, 322, 424
DpnII GATC 3 cut(s) 196, 320, 422
DraI TTTAAA 1 cut(s) 441
Eam1104I CTCTTC 1 cut(s) 225
EarI CTCTTC 1 cut(s) 225
Eco47I GGWCC 2 cut(s) 132, 261
EcoO109I RGGNCCY 1 cut(s) 132
FaeI CATG 1 cut(s) 203
FaiI YATR 8 cut(s) 89, 107, 109, 201, 296, 430, 453, 472
FaqI GGGAC 1 cut(s) 118
FatI CATG 1 cut(s) 199
FbaI TGATCA 1 cut(s) 196
Fnu4HI GCNGC 4 cut(s) 159, 162, 292, 414
FokI GGATG 1 cut(s) 329
Fsp4HI GCNGC 4 cut(s) 159, 162, 292, 414
FspI TGCGCA 1 cut(s) 149
GlaI GCGC 2 cut(s) 149, 211
GluI GCNGC 4 cut(s) 159, 162, 292, 414
GsuI CTGGAG 1 cut(s) 264
HapII CCGG 1 cut(s) 228
HhaI GCGC 2 cut(s) 150, 212
Hin1II CATG 1 cut(s) 203
Hin6I GCGC 2 cut(s) 148, 210
HinP1I GCGC 2 cut(s) 148, 210
HindIII AAGCTT 2 cut(s) 233, 374
HinfI GANTC 2 cut(s) 217, 308
HpaII CCGG 1 cut(s) 228
HphI GGTGA 2 cut(s) 51, 290
Hpy188I TCNGA 3 cut(s) 75, 261, 307
Hpy188III TCNNGA 3 cut(s) 122, 243, 330
HpyAV CCTTC 1 cut(s) 122
HpyCH4III ACNGT 3 cut(s) 40, 143, 336
HpyCH4V TGCA 5 cut(s) 34, 55, 161, 291, 416
HpyF10VI GCNNNNNNNGC 2 cut(s) 388, 413
HpyF3I CTNAG 4 cut(s) 72, 213, 236, 463
Hsp92II CATG 1 cut(s) 203
HspAI GCGC 2 cut(s) 148, 210
KroI GCCGGC 1 cut(s) 227
KroNI GCCGGC 1 cut(s) 229
Ksp22I TGATCA 1 cut(s) 196
Kzo9I GATC 3 cut(s) 196, 320, 422
Lsp1109I GCAGC 4 cut(s) 145, 173, 303, 400
MaeIII GTNAC 2 cut(s) 57, 248
MalI GATC 3 cut(s) 198, 322, 424
MboI GATC 3 cut(s) 196, 320, 422
MboII GAAGA 2 cut(s) 212, 407
MflI RGATCY 2 cut(s) 320, 422
MlyI GAGTC 2 cut(s) 211, 317
MnlI CCTC 4 cut(s) 73, 81, 239, 342
MroNI GCCGGC 1 cut(s) 227
MseI TTAA 2 cut(s) 24, 440
MspCI CTTAAG 1 cut(s) 23
MspI CCGG 1 cut(s) 228
MwoI GCNNNNNNNGC 2 cut(s) 388, 413
NaeI GCCGGC 1 cut(s) 229
NdeII GATC 3 cut(s) 196, 320, 422
NgoMIV GCCGGC 1 cut(s) 227
NlaIII CATG 1 cut(s) 203
NlaIV GGNNCC 1 cut(s) 134
NmuCI GTSAC 1 cut(s) 57
NsbI TGCGCA 1 cut(s) 149
PaqCI CACCTGC 1 cut(s) 407
PdiI GCCGGC 1 cut(s) 229
PflMI CCANNNNNTGG 1 cut(s) 275
PkrI GCNGC 4 cut(s) 160, 163, 293, 415
PleI GAGTC 2 cut(s) 211, 316
PpsI GAGTC 2 cut(s) 211, 316
PpuMI RGGWCCY 1 cut(s) 132
Psp5II RGGWCCY 1 cut(s) 132
PspN4I GGNNCC 1 cut(s) 134
PspPI GGNCC 2 cut(s) 132, 261
PspPPI RGGWCCY 1 cut(s) 132
PstI CTGCAG 3 cut(s) 36, 163, 418
PsuI RGATCY 2 cut(s) 320, 422
SaqAI TTAA 2 cut(s) 24, 440
SatI GCNGC 4 cut(s) 159, 162, 292, 414
Sau3AI GATC 3 cut(s) 196, 320, 422
Sau96I GGNCC 2 cut(s) 132, 261
SchI GAGTC 2 cut(s) 211, 317
SfcI CTRYAG 4 cut(s) 32, 159, 180, 414
SinI GGWCC 2 cut(s) 132, 261
SmlI CTYRAG 2 cut(s) 23, 93
SmoI CTYRAG 2 cut(s) 23, 93
SspI AATATT 1 cut(s) 51
TaaI ACNGT 3 cut(s) 40, 143, 336
TaqI TCGA 1 cut(s) 123
TaqII GACCGA 1 cut(s) 20
Tru1I TTAA 2 cut(s) 24, 440
Tru9I TTAA 2 cut(s) 24, 440
TscAI CASTG 2 cut(s) 148, 192
TseFI GTSAC 1 cut(s) 57
TseI GCWGC 4 cut(s) 158, 161, 291, 413
Tsp45I GTSAC 1 cut(s) 57
TspDTI ATGAA 1 cut(s) 440
TspRI CASTG 2 cut(s) 148, 192
Van91I CCANNNNNTGG 1 cut(s) 275
Vha464I CTTAAG 1 cut(s) 23
VpaK11BI GGWCC 2 cut(s) 132, 261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.