Rmu_sc0003708.1_g000018

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003708.1
Physical Location & Seq
Reverse (-)
77381 .. 78415
1035 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003708.1_g000018.1.cds

Sequence Viewer

Length: 231 bp
atggcgggtgcgttttgggggacgcgagtgatggagatagtgaagaagcacgactccggcggtctggtttggaagagaataaagctgaccaccacccgcaaagccaacgccaagaagcgcctcctccgtgtttggcagaatgaggctgtcctgaaggcatgtgccgaaccacctccttcaaaatcgtcaggggctgatgctagtgaagttgtgagaaagacaactgaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

76

Amino Acids

8.42

Weight (kDa)

10.35

Isoelectric Point (pI)

42.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013095)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 25
AciI CCGC 3 cut(s) 5, 60, 97
AcuI CTGAAG 1 cut(s) 173
AgsI TTSAA 1 cut(s) 180
AluBI AGCT 1 cut(s) 85
AluI AGCT 1 cut(s) 85
AlwNI CAGNNNCTG 1 cut(s) 194
AspLEI GCGC 1 cut(s) 120
BccI CCATC 1 cut(s) 25
BfaI CTAG 1 cut(s) 201
BfoI RGCGCY 1 cut(s) 121
BmsI GCATC 1 cut(s) 187
BseRI GAGGAG 1 cut(s) 113
Bsh1236I CGCG 1 cut(s) 25
BsiSI CCGG 1 cut(s) 57
BslFI GGGAC 1 cut(s) 34
BsmFI GGGAC 1 cut(s) 34
BspACI CCGC 3 cut(s) 5, 60, 97
BspFNI CGCG 1 cut(s) 25
Bst6I CTCTTC 1 cut(s) 68
BstFNI CGCG 1 cut(s) 25
BstH2I RGCGCY 1 cut(s) 121
BstHHI GCGC 1 cut(s) 120
BstNSI RCATGY 1 cut(s) 162
BstUI CGCG 1 cut(s) 25
CaiI CAGNNNCTG 1 cut(s) 194
CfoI GCGC 1 cut(s) 120
CseI GACGC 1 cut(s) 31
CviAII CATG 1 cut(s) 159
CviJI RGCY 4 cut(s) 85, 104, 146, 194
CviKI_1 RGCY 4 cut(s) 85, 104, 146, 194
Eam1104I CTCTTC 1 cut(s) 68
EarI CTCTTC 1 cut(s) 68
Eco57I CTGAAG 1 cut(s) 173
FaeI CATG 1 cut(s) 162
FaiI YATR 1 cut(s) 160
FaqI GGGAC 1 cut(s) 34
FatI CATG 1 cut(s) 158
FauI CCCGC 1 cut(s) 104
FspBI CTAG 1 cut(s) 201
GlaI GCGC 1 cut(s) 119
HaeII RGCGCY 1 cut(s) 121
HapII CCGG 1 cut(s) 57
HgaI GACGC 1 cut(s) 31
HhaI GCGC 1 cut(s) 120
Hin1II CATG 1 cut(s) 162
Hin6I GCGC 1 cut(s) 118
HinP1I GCGC 1 cut(s) 118
HinfI GANTC 1 cut(s) 53
HpaII CCGG 1 cut(s) 57
Hpy188III TCNNGA 1 cut(s) 151
HpyAV CCTTC 2 cut(s) 148, 186
Hsp92II CATG 1 cut(s) 162
HspAI GCGC 1 cut(s) 118
LpnPI CCDG 4 cut(s) 50, 70, 164, 174
LweI GCATC 1 cut(s) 187
MaeI CTAG 1 cut(s) 201
MboII GAAGA 2 cut(s) 55, 85
MlyI GAGTC 1 cut(s) 47
MnlI CCTC 4 cut(s) 131, 134, 136, 183
MspI CCGG 1 cut(s) 57
MvnI CGCG 1 cut(s) 25
NlaIII CATG 1 cut(s) 162
NspI RCATGY 1 cut(s) 162
PleI GAGTC 1 cut(s) 47
PpsI GAGTC 1 cut(s) 47
PstNI CAGNNNCTG 1 cut(s) 194
SchI GAGTC 1 cut(s) 47
SetI ASST 2 cut(s) 87, 175
SfaNI GCATC 1 cut(s) 187
SsiI CCGC 3 cut(s) 5, 60, 97
SspMI CTAG 1 cut(s) 201
TspGWI ACGGA 1 cut(s) 116
XceI RCATGY 1 cut(s) 162
XspI CTAG 1 cut(s) 201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.