Rmu_sc0004275.1_g000017

Delta-aminolevulinic acid dehydratase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004275.1
Physical Location & Seq
Forward (+)
45794 .. 52318
6525 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004275.1_g000017.1.cds

Sequence Viewer

Length: 2478 bp
atgcctcagggcatcaccttcaagctacccgttaaagcctcagcggcatccacgagctctcacgctcacgcctttgcggcactcttgagcttccgctcacgagcttaccactcacggcttctggcacccacgagcttccgctcacgagttttcccctcacgagcttaccgctcacgccttcgcggcacccacgagcttccgctcatgagttttctgctcacgccttcgcggcacccacgagcttccgctcataagcttacaactcatgagctttccgctcacgcattcgcggcacccccgagcttcaactcaagagctttccgctcacgagcttaccgctcactccttcgcggcccccacgagcttccgctcacgagttttcctctcacgagcttaccgctcactccttcgctggacccacgagcttccgttcacaagcttaccactcaggagctttccgcacacgccttcgtggcacccacgagcttccgctcactagttttccactcacgagcttaccgctcacgccttcgcggtacccacgagcttcctctcacgagttttccactcacgagcttaccgctcacgccttcgcggcacccacaagcttcctctcacgagttttccgctctcgccttcgtggcacccacgagcttccgctcacgagcttacctctcacgccttcgcggcacccacgagctttcgctcacgactttccgctcacgccttcgcggcacccacgagcttccgttcacgagcttaccactcaggagcttaccgctcacgccttcgcgacacccccgagcttccgctcacgagcttaccatcatgagctttccgctcacaccttcgcggcacccccgagcttcctctcacgaggtttccgctcacgccttcgcggcacccccgcgcttctcctcacgagcttgccactcaggagctttccgttcacgccttcgcgacacccccgagcttccgctcacgagcttacctctcacgccttcgcggcacccacgagcttctcctcacgagcttaccactcaggagatttccgctcacgccttcgcggcaacccccgagcttccgctcatgccttcccggcaacccttgacttcccgctcatgccttcccggcaacccacgagcttccggctcatgccttcccggcaacccacgagctttcgctcatgccttcccggcaaccccgagcttccgctcatgccttcccgacaccctcgagcttcccgctcatgcctccccggcaacccccgagcttccgctcatgccttccgggaacccccgagtttcccgctcatgcattcccggtaacccccgagctttcgctcatgccttcccggcacccccgagcttccgctcatgtcttcccggcaacccacgagcttccgctcaggccttctcggcaacccacgagtttcccgctcacaagatttctgctaatgccttcctggcaatcctcgagctttacactcatcctctaagtcgccggcctcggcgtaaccggaggtcaccagctctcagggcggcgtttcaggaaacaagcttgtcccctgcgaattttgtgtacccacttttcattcatgaaggtcaggaagacgcacctattggggcaatgccgggttgttataggcttgggtggagacatgggcttgtggaagaggttgcaaaggctcgagatgttggtgttaatagtattgtgctcttccccaaaatcccggatgctttgaagaatgcaacaggtgatgaagcctacaacgatgatggtttagtacctcgatcaattcggttgctcaaggacaaattccctgatcttgttatctacactgatgttgctctagatccatattcctcggatgggcatgatggtattgttagagaagatggagttataatgaatgacgagactgtgcatcaattgtgtaaacaagctgtttctcaggcccgagctggagcagacgtggttagtccgagtgatatgatggatggtcgtgtaggagctattcgaaatgctcttgatgctgaaggttttcatcatgtttctatcatgtcctatacagctaagtatgcaagttcattctatggtccatttcgggaagctctggactcaaatccacgttttggtgacaagaaaacttatcagatgaacccggcaaattatagagaggctctagtcgaggcaggtgaagatgagtctgaaggagctgatatcctcctggtgaaacctggtctgccatatctggatatcataagattactccgggatagctcttctttgccaatcgccgcatatcaggtttcgggtgagtattcaatgatcaaggctggtggtgctctcaaaatgattgatgaagaaaaggttatgcttgaatcgctgatgtgtctacgaagggctggtgctgacataatcctcacatactttgccatgcaagctgccagaagtttatgtggtgagaagaggtga

Protein Analysis

825

Amino Acids

90.51

Weight (kDa)

9.95

Isoelectric Point (pI)

58.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0025574)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1907
AarI CACCTGC 1 cut(s) 2186
Acc36I ACCTGC 1 cut(s) 2186
Acc65I GGTACC 1 cut(s) 536
AccB7I CCANNNNNTGG 1 cut(s) 2135
AccI GTMKAC 1 cut(s) 2398
AclWI GGATC 1 cut(s) 1850
AcsI RAATTY 2 cut(s) 1573, 1817
AcuI CTGAAG 2 cut(s) 2058, 2232
AfaI GTAC 3 cut(s) 538, 1583, 1788
AfiI CCNNNNNNNGG 2 cut(s) 1872, 2135
AgsI TTSAA 5 cut(s) 22, 307, 1744, 2328, 2384
AhlI ACTAGT 1 cut(s) 496
AjiI CACGTC 1 cut(s) 1975
AjnI CCWGG 3 cut(s) 1464, 2229, 2239
Alw21I GWGCWC 3 cut(s) 59, 1719, 2350
Alw26I GTCTC 2 cut(s) 1651, 1913
AlwI GGATC 1 cut(s) 1850
AoxI GGCC 4 cut(s) 352, 1410, 1505, 1956
ApeKI GCWGC 1 cut(s) 2447
ApoI RAATTY 2 cut(s) 1573, 1817
Asp700I GAANNNNTTC 1 cut(s) 2043
Asp718I GGTACC 1 cut(s) 536
AspLEI GCGC 1 cut(s) 912
AspS9I GGNCC 4 cut(s) 353, 415, 1957, 2099
AsuHPI GGTGA 8 cut(s) 7, 1518, 1769, 2150, 2210, 2245, 2330, 2477
AsuII TTCGAA 1 cut(s) 2020
AvaII GGWCC 2 cut(s) 415, 2099
AxyI CCTNAGG 1 cut(s) 6
BanII GRGCYC 1 cut(s) 59
BbsI GAAGAC 2 cut(s) 1373, 1617
Bbv12I GWGCWC 3 cut(s) 59, 1719, 2350
BbvCI CCTCAGC 1 cut(s) 40
BbvI GCAGC 1 cut(s) 2434
BccI CCATC 7 cut(s) 833, 1772, 1865, 1874, 1892, 1990, 1994
BceAI ACGGC 1 cut(s) 131
BciT130I CCWGG 3 cut(s) 1466, 2231, 2241
BclI TGATCA 1 cut(s) 2331
BcoDI GTCTC 2 cut(s) 1651, 1913
BcuI ACTAGT 1 cut(s) 496
BfaI CTAG 3 cut(s) 497, 1853, 2186
BfuAI ACCTGC 1 cut(s) 2186
Bme18I GGWCC 2 cut(s) 415, 2099
BmgBI CACGTC 1 cut(s) 1975
BmgT120I GGNCC 4 cut(s) 353, 415, 1957, 2099
BmsI GCATC 5 cut(s) 21, 56, 1726, 1936, 2023
BpiI GAAGAC 2 cut(s) 1373, 1617
BplI GAGNNNNNCTC 6 cut(s) 367, 399, 657, 689, 976, 1008
BpmI CTGGAG 1 cut(s) 1986
Bpu10I CCTNAGC 2 cut(s) 40, 1407
Bpu14I TTCGAA 1 cut(s) 2020
BpuEI CTTGAG 3 cut(s) 106, 295, 1793
BsaJI CCNNGG 3 cut(s) 1257, 1508, 1866
BsaWI WCCGGW 1 cut(s) 1518
BsaXI ACNNNNNCTCC 2 cut(s) 1959, 1989
Bsc4I CCNNNNNNNGG 2 cut(s) 1872, 2135
Bse118I RCCGGY 1 cut(s) 1503
Bse21I CCTNAGG 1 cut(s) 6
Bse3DI GCAATG 1 cut(s) 1635
BseBI CCWGG 3 cut(s) 1466, 2231, 2241
BseDI CCNNGG 3 cut(s) 1257, 1508, 1866
BseGI GGATG 5 cut(s) 47, 1489, 1741, 1876, 2005
BseLI CCNNNNNNNGG 2 cut(s) 1872, 2135
BseMI GCAATG 1 cut(s) 1635
BseMII CTCAG 9 cut(s) 20, 54, 461, 781, 948, 1055, 1421, 1549, 1967
BseRI GAGGAG 2 cut(s) 907, 1014
BseXI GCAGC 1 cut(s) 2434
BshFI GGCC 4 cut(s) 354, 1412, 1507, 1958
BsiHKAI GWGCWC 3 cut(s) 59, 1719, 2350
BslFI GGGAC 1 cut(s) 1549
BslI CCNNNNNNNGG 2 cut(s) 1872, 2135
BsmAI GTCTC 2 cut(s) 1651, 1913
BsmFI GGGAC 1 cut(s) 1549
BsmI GAATGC 3 cut(s) 284, 1317, 1753
BsnI GGCC 4 cut(s) 354, 1412, 1507, 1958
Bsp119I TTCGAA 1 cut(s) 2020
Bsp1286I GDGCHC 3 cut(s) 59, 1719, 2350
Bsp143I GATC 4 cut(s) 1793, 1825, 1855, 2331
Bsp68I TCGCGA 2 cut(s) 793, 960
BspANI GGCC 4 cut(s) 354, 1412, 1507, 1958
BspCNI CTCAG 9 cut(s) 19, 53, 460, 780, 947, 1054, 1420, 1548, 1966
BspHI TCATGA 4 cut(s) 204, 265, 828, 1597
BspMI ACCTGC 1 cut(s) 2186
BspPI GGATC 1 cut(s) 1850
BspQI GCTCTTC 2 cut(s) 1724, 2290
BspT104I TTCGAA 1 cut(s) 2020
BsrDI GCAATG 1 cut(s) 1635
BsrFI RCCGGY 1 cut(s) 1503
BssAI RCCGGY 1 cut(s) 1503
BssECI CCNNGG 3 cut(s) 1257, 1508, 1866
BssMI GATC 4 cut(s) 1793, 1825, 1855, 2331
Bst2UI CCWGG 3 cut(s) 1466, 2231, 2241
Bst4CI ACNGT 1 cut(s) 1924
Bst6I CTCTTC 4 cut(s) 1668, 1724, 2290, 2465
BstBI TTCGAA 1 cut(s) 2020
BstC8I GCNNGC 3 cut(s) 928, 1505, 2445
BstEII GGTNACC 2 cut(s) 1325, 1524
BstF5I GGATG 5 cut(s) 47, 1489, 1741, 1876, 2005
BstHHI GCGC 1 cut(s) 912
BstKTI GATC 4 cut(s) 1796, 1828, 1858, 2334
BstMAI GTCTC 2 cut(s) 1651, 1913
BstMBI GATC 4 cut(s) 1793, 1825, 1855, 2331
BstNI CCWGG 3 cut(s) 1466, 2231, 2241
BstPI GGTNACC 2 cut(s) 1325, 1524
BstV1I GCAGC 1 cut(s) 2434
BstV2I GAAGAC 2 cut(s) 1373, 1617
BstX2I RGATCY 1 cut(s) 1855
BstYI RGATCY 1 cut(s) 1855
Bsu36I CCTNAGG 1 cut(s) 6
BsuRI GGCC 4 cut(s) 354, 1412, 1507, 1958
BtrI CACGTC 1 cut(s) 1975
BtsCI GGATG 5 cut(s) 47, 1489, 1741, 1876, 2005
BtsIMutI CAGTG 1 cut(s) 1839
BtuMI TCGCGA 2 cut(s) 793, 960
BveI ACCTGC 1 cut(s) 2186
Cac8I GCNNGC 3 cut(s) 928, 1505, 2445
CciI TCATGA 4 cut(s) 204, 265, 828, 1597
CfoI GCGC 1 cut(s) 912
Cfr10I RCCGGY 1 cut(s) 1503
Cfr13I GGNCC 4 cut(s) 353, 415, 1957, 2099
CseI GACGC 1 cut(s) 1622
CsiI ACCWGGT 1 cut(s) 2239
Csp6I GTAC 3 cut(s) 537, 1582, 1787
CspCI CAANNNNNGTGG 2 cut(s) 2323, 2358
CviQI GTAC 3 cut(s) 537, 1582, 1787
DpnI GATC 4 cut(s) 1795, 1827, 1857, 2333
DpnII GATC 4 cut(s) 1793, 1825, 1855, 2331
Eam1104I CTCTTC 4 cut(s) 1668, 1724, 2290, 2465
EarI CTCTTC 4 cut(s) 1668, 1724, 2290, 2465
Ecl136II GAGCTC 1 cut(s) 57
Eco147I AGGCCT 1 cut(s) 1412
Eco24I GRGCYC 1 cut(s) 59
Eco32I GATATC 2 cut(s) 2224, 2260
Eco47I GGWCC 2 cut(s) 415, 2099
Eco53kI GAGCTC 1 cut(s) 57
Eco57I CTGAAG 2 cut(s) 2058, 2232
Eco81I CCTNAGG 1 cut(s) 6
Eco91I GGTNACC 2 cut(s) 1325, 1524
EcoICRI GAGCTC 1 cut(s) 57
EcoO65I GGTNACC 2 cut(s) 1325, 1524
EcoRII CCWGG 3 cut(s) 1464, 2229, 2239
EcoRV GATATC 2 cut(s) 2224, 2260
EcoT22I ATGCAT 1 cut(s) 1319
EcoT38I GRGCYC 1 cut(s) 59
FaqI GGGAC 1 cut(s) 1549
FauI CCCGC 5 cut(s) 915, 1124, 1252, 1316, 1444
FbaI TGATCA 1 cut(s) 2331
FblI GTMKAC 1 cut(s) 2398
FokI GGATG 5 cut(s) 34, 1476, 1748, 1883, 2012
FriOI GRGCYC 1 cut(s) 59
FspBI CTAG 3 cut(s) 497, 1853, 2186
GlaI GCGC 1 cut(s) 911
GsuI CTGGAG 1 cut(s) 1986
HaeIII GGCC 4 cut(s) 354, 1412, 1507, 1958
HgaI GACGC 1 cut(s) 1622
HhaI GCGC 1 cut(s) 912
Hin6I GCGC 1 cut(s) 910
HinP1I GCGC 1 cut(s) 910
HindIII AAGCTT 4 cut(s) 254, 437, 606, 1558
HinfI GANTC 3 cut(s) 2120, 2207, 2384
HphI GGTGA 8 cut(s) 7, 1518, 1769, 2150, 2210, 2245, 2330, 2477
Hpy166II GTNNAC 6 cut(s) 433, 753, 950, 1582, 1940, 2399
Hpy188I TCNGA 4 cut(s) 1870, 1986, 2157, 2212
Hpy8I GTNNAC 6 cut(s) 433, 753, 950, 1582, 1940, 2399
HpyCH4III ACNGT 1 cut(s) 1924
HpyCH4IV ACGT 2 cut(s) 1974, 2131
HpyCH4V TGCA 6 cut(s) 1317, 1682, 1751, 1927, 2084, 2443
HpySE526I ACGT 2 cut(s) 1974, 2131
HspAI GCGC 1 cut(s) 910
KpnI GGTACC 1 cut(s) 540
KroI GCCGGC 1 cut(s) 1503
KroNI GCCGGC 1 cut(s) 1505
Ksp22I TGATCA 1 cut(s) 2331
Kzo9I GATC 4 cut(s) 1793, 1825, 1855, 2331
LguI GCTCTTC 2 cut(s) 1724, 2290
LmnI GCTCC 6 cut(s) 451, 771, 938, 1967, 2012, 2216
Lsp1109I GCAGC 1 cut(s) 2434
LweI GCATC 5 cut(s) 21, 56, 1726, 1936, 2023
MabI ACCWGGT 1 cut(s) 2239
MaeI CTAG 3 cut(s) 497, 1853, 2186
MaeII ACGT 2 cut(s) 1974, 2131
MaeIII GTNAC 4 cut(s) 1325, 1514, 1524, 2138
MalI GATC 4 cut(s) 1795, 1827, 1857, 2333
MboI GATC 4 cut(s) 1793, 1825, 1855, 2331
MboII GAAGA 9 cut(s) 1373, 1622, 1685, 1711, 1756, 1907, 2213, 2277, 2378
MfeI CAATTG 1 cut(s) 1931
MflI RGATCY 1 cut(s) 1855
MhlI GDGCHC 3 cut(s) 59, 1719, 2350
MluCI AATT 5 cut(s) 1573, 1797, 1817, 1931, 2170
MlyI GAGTC 2 cut(s) 2114, 2216
Mph1103I ATGCAT 1 cut(s) 1319
MroNI GCCGGC 1 cut(s) 1503
MroXI GAANNNNTTC 1 cut(s) 2043
MseI TTAA 2 cut(s) 33, 1704
MspA1I CMGCKG 1 cut(s) 44
MunI CAATTG 1 cut(s) 1931
Mva1269I GAATGC 3 cut(s) 284, 1317, 1753
MvaI CCWGG 3 cut(s) 1466, 2231, 2241
NaeI GCCGGC 1 cut(s) 1505
NdeII GATC 4 cut(s) 1793, 1825, 1855, 2331
NgoMIV GCCGGC 1 cut(s) 1503
NmeAIII GCCGAG 2 cut(s) 1397, 1489
NmuCI GTSAC 2 cut(s) 1524, 2138
NruI TCGCGA 2 cut(s) 793, 960
NsiI ATGCAT 1 cut(s) 1319
NspV TTCGAA 1 cut(s) 2020
PaeR7I CTCGAG 3 cut(s) 1235, 1475, 1689
PagI TCATGA 4 cut(s) 204, 265, 828, 1597
PaqCI CACCTGC 1 cut(s) 2186
PceI AGGCCT 1 cut(s) 1412
PciSI GCTCTTC 2 cut(s) 1724, 2290
PctI GAATGC 3 cut(s) 284, 1317, 1753
PdiI GCCGGC 1 cut(s) 1505
PdmI GAANNNNTTC 1 cut(s) 2043
PfeI GAWTC 1 cut(s) 2384
PflMI CCANNNNNTGG 1 cut(s) 2135
PfoI TCCNGGA 3 cut(s) 1289, 1731, 2274
PleI GAGTC 2 cut(s) 2114, 2215
PpsI GAGTC 2 cut(s) 2114, 2215
PsiI TTATAA 1 cut(s) 1907
Psp124BI GAGCTC 1 cut(s) 59
Psp6I CCWGG 3 cut(s) 1464, 2229, 2239
PspEI GGTNACC 2 cut(s) 1325, 1524
PspGI CCWGG 3 cut(s) 1464, 2229, 2239
PspPI GGNCC 4 cut(s) 353, 415, 1957, 2099
PspXI VCTCGAGB 2 cut(s) 1235, 1475
PsuI RGATCY 1 cut(s) 1855
RruI TCGCGA 2 cut(s) 793, 960
RsaI GTAC 3 cut(s) 538, 1583, 1788
RsaNI GTAC 3 cut(s) 537, 1582, 1787
SacI GAGCTC 1 cut(s) 59
SapI GCTCTTC 2 cut(s) 1724, 2290
SaqAI TTAA 2 cut(s) 33, 1704
Sau3AI GATC 4 cut(s) 1793, 1825, 1855, 2331
Sau96I GGNCC 4 cut(s) 353, 415, 1957, 2099
SchI GAGTC 2 cut(s) 2114, 2216
SduI GDGCHC 3 cut(s) 59, 1719, 2350
SexAI ACCWGGT 1 cut(s) 2239
SfaNI GCATC 5 cut(s) 21, 56, 1726, 1936, 2023
Sfr274I CTCGAG 3 cut(s) 1235, 1475, 1689
SfuI TTCGAA 1 cut(s) 2020
SinI GGWCC 2 cut(s) 415, 2099
SlaI CTCGAG 3 cut(s) 1235, 1475, 1689
SmlI CTYRAG 6 cut(s) 85, 310, 1235, 1475, 1689, 1808
SmoI CTYRAG 6 cut(s) 85, 310, 1235, 1475, 1689, 1808
SpeI ACTAGT 1 cut(s) 496
Sse9I AATT 5 cut(s) 1573, 1797, 1817, 1931, 2170
SseBI AGGCCT 1 cut(s) 1412
SspMI CTAG 3 cut(s) 497, 1853, 2186
SstI GAGCTC 1 cut(s) 59
StuI AGGCCT 1 cut(s) 1412
TaaI ACNGT 1 cut(s) 1924
TaiI ACGT 2 cut(s) 1977, 2134
TaqI TCGA 6 cut(s) 1236, 1476, 1690, 1792, 2020, 2190
TasI AATT 5 cut(s) 1573, 1797, 1817, 1931, 2170
TfiI GAWTC 1 cut(s) 2384
Tru1I TTAA 2 cut(s) 33, 1704
Tru9I TTAA 2 cut(s) 33, 1704
TscAI CASTG 1 cut(s) 1846
TseFI GTSAC 2 cut(s) 1524, 2138
TseI GCWGC 1 cut(s) 2447
Tsp45I GTSAC 2 cut(s) 1524, 2138
TspDTI ATGAA 9 cut(s) 1582, 1586, 1614, 1776, 1925, 2036, 2079, 2174, 2379
TspGWI ACGGA 3 cut(s) 418, 738, 935
TspRI CASTG 1 cut(s) 1846
Van91I CCANNNNNTGG 1 cut(s) 2135
VpaK11BI GGWCC 2 cut(s) 415, 2099
XapI RAATTY 2 cut(s) 1573, 1817
XbaI TCTAGA 1 cut(s) 1852
XhoI CTCGAG 3 cut(s) 1235, 1475, 1689
XmiI GTMKAC 1 cut(s) 2398
XmnI GAANNNNTTC 1 cut(s) 2043
XspI CTAG 3 cut(s) 497, 1853, 2186
Zsp2I ATGCAT 1 cut(s) 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.