Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004507.1

Orthogroup ID

OG0010872

Physical Location & Seq

Genomic Coordinates Reverse (-)

43317 .. 53069

Gene Structure 9753 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004507.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3180 bp

atgaccaagccggaatcggaaaacccgccggcgaacctgagaagttttcgggcttcttcctgcctccgtcgccggtcattcggagcagggacgaccgagctccagttggcgatgccgagaggagttgaacgacgcctgtctgacgtcagaatgtccggccgtcacgagaaggagaaaggcgtcaacgtccaggtccttcttcgatgcaggccgtttagtgacgatgagttgcggagcaacgcgccgcaggtgataacatgtaatgagtaccagagagaagtggctgtgtctcagagcattgcagggaagcatatcgatagggttttcactttcgataaggtttttggtcctaatgcgcagcagagagatctttatgaccaagctgtgattccgatagtacatgaagtcttggaagggttcaactgcaccatttttgcttacgggcaaactggtacagggaagacttacacaatggagggtgaatgcaaaaaggcaaagagtgggccaaatggagaattgcctcctggagctggagttattccaagggctgtccagcagatttttgatacccttgagggccagtgcacagagtacagcgtaaaagttacttttttagagctttacaatgaggagattaccgatcttcttgccccagaagaactgtctagagttcctgcagaggagaagcagaaaaagcagttgcctctaatggaggatgggaaaggtggagtcctcgtaagaggtctggaggaggaaattgtgacaagtgccagtgagattttcactcttcttgaaagagggtctgcgaaacgtcgcactgctgaaactttattgaacaaacaatctagtcggtcacattctctcttttccatcacgatacacattaaggaagcaaccccagaaggtgaggagctgatcaagtgcggaaagttgaacttagtagacttggctggctcagaaaacatatctcgttctggtgctagagagggtcgtgcacgagaagctggagaaatcaacaaaagtttactgactttagggcgagtaatcaatgctttggtggagcatcttggacatgttccatacagggatagcaagcttactaggttacttcgcgattcgcttggcggaagaaccaagacttgcataattgctacagtctcaccagctgtccattgtctggaagaaaccctgagcacgttggattatgcacacagggccaaaaatataaaaaataagcctgaggtgaatcaaaagatgatgaaatcaacacttatcaaggatctttatggggaaattgaacgacttaaggcagaggtatatgctgcacgtgagaagaatggtgtttatatcccaaaggagcggtactatcaagaagaaagtgaaaggaaggctatggctgatcagattgagcaaatggggcttaccctagaaacccatcagaagaaatttgaggagttgcaggataaatatgtcattcaggttcgacagtgtcatgatttgagcagcaaacttgaatccactgagaaaacgttggatcatactgctaaactgctttctaacactgaagaagacttgatgaaatgtcgctatgctctgaaggagaaagattttattatctctgagcagaaaaaagctgaaaatgctttgactcttcaagcatgcactttgcagtctgacctggagaaagcactccaggataatgcttcattgtttcaaaaaattggtagagaggacaagctgagtgctgataataggctggtagtgaatagttaccaggaagatcttgccaagcgagttggttccctttgccagatggtggaaacttcaatgtctcgtcagaatgaacaccttcagggtgttgagaacctctgtcagtcctttttactggcccatgaaaaggcggttatggaaatgaagaagaaagtggcatcatcgggggctttgtttgtttctcatattgaggcagtgcaaaatgttgtgcgtttgcacaatgcgagctctaatgctggtctggatgaaatttcatcattggcttctgccaatacacattctattgaagaatttctagcttcggaggctggtgaatcagcttcgatatttcagaatcttctgagtggtctctcaacacagcagggagagatgacaatttttgcgaaggaattgaaacagaaattccattctagtattaatcaaacaaaggaaatttctgagtactctcaaggatttctacacaagcttatggaagaatcaaaaaggcttgaagatcatgtgacaaatgctaatgatattaaaatgaagagcatttctgaatttcagaaggcttatgaggagcagtcaaaatctgatgcagagaagcttattgccaatatctctaatttggtcactgatcatatttgtcgtcaaaaagagatggtggatgccaagcttattgatttcagagaaagtgcaattgcagacaagtctttcttggatgggcacgtttcttctatggatggtatttccacagatgcaaaaagaaaatggatggaattttctatgcaagcagagaatgatgctaaggatggtgttgattactctgctgcgaaacattgccgcatggaggtacttctgcagcaatgtgtaagtactgccgattcagcttcgaagcactggaaaaagacgcaggactctgtgaatgatatgggaaataaacatgtttcagctatggggtcactcatcaggaatgcttatgatagtaatgagcaacatgatgtggaaatcaattcagtgaggactgcagttgagaaagatgtggcaaaggatagtgaggatgcccttcagcatgtagaaagtatggatgagcaggagcgggaatctatatctggaatcttggaggttgtcaaggctcaatcaaccacccttgagactttccgggaggatcactgtggccaagctgcatctattgaagagagggcgcgggatacctttcagaaccagtatatggattatgaaccgtgtggttctacaccagaaaaggccgaaccagaagttccaaccaagggaacaatcgagtcactacgagccatgccaatggaagctcttgttgaggaatttcgggaaaacaattcatatgactcatttgatgtgaaggagctgaaaccatctcttataccgcgctcgccacttacactactcaactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0008574 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

1059

Amino Acids

118.76

Weight (kDa)

5.56

Isoelectric Point (pI)

52.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010872)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36200 AT2G36200
fragaria_vesca	FvH4_6g19220
malus_domestica	MD12G1028000.v1.1 MD14G1028400.v1.1
prunus_persica	Prupe.7G103600_v2.0.a1 Prupe.7G103600_v2.0.a1
pyrus_communis	pycom12g02680 pycom14g02650
rosa_chinensis	RchiOBHm_Chr3g0474331
rosa_laevigata	RLG00000023932
rosa_multiflora	Rmu_sc0000098.1_g000007 Rmu_sc0004507.1_g000011
rosa_roxburghii	Rroxscaffold_6G00407340
rosa_rugosa	Rorug03G0140100
rosa_samantha	Rh3AG190900 Rh3BG220100 Rh3CG215300 Rh3DG215800
rosa_wichuraiana	Rw3G017410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	238
AatII	GACGTC	1 cut(s)	147
Acc16I	TGCGCA	1 cut(s)	357
Acc36I	ACCTGC	1 cut(s)	238
AccB7I	CCANNNNNTGG	3 cut(s)	1177, 1816, 2980
AccBSI	CCGCTC	2 cut(s)	1360, 2848
AccI	GTMKAC	1 cut(s)	942
AccII	CGCG	4 cut(s)	242, 1113, 2956, 3154
AclI	AACGTT	1 cut(s)	1529
AclWI	GGATC	3 cut(s)	1287, 1542, 2925
AcoI	YGGCCR	2 cut(s)	157, 2926
AcsI	RAATTY	8 cut(s)	1445, 2019, 2060, 2171, 2202, 2309, 2528, 3089
AcuI	CTGAAG	4 cut(s)	1584, 1616, 1835, 2801
AcvI	CACGTG	1 cut(s)	1328
AcyI	GRCGYC	3 cut(s)	133, 144, 180
AfaI	GTAC	8 cut(s)	269, 399, 454, 593, 1364, 2213, 2604, 2626
AfiI	CCNNNNNNNGG	7 cut(s)	530, 1177, 1816, 1897, 2599, 2980, 3038
AflII	CTTAAG	1 cut(s)	1304
AflIII	ACRYGT	3 cut(s)	257, 1072, 2692
AjnI	CCWGG	5 cut(s)	189, 523, 1677, 1692, 1773
AjuI	GAANNNNNNNTTGG	2 cut(s)	372, 404
Alw21I	GWGCWC	5 cut(s)	102, 587, 997, 1196, 2000
Alw26I	GTCTC	5 cut(s)	294, 1162, 1836, 2123, 2897
Alw44I	GTGCAC	2 cut(s)	583, 993
AlwI	GGATC	3 cut(s)	1287, 1542, 2925
AoxI	GGCC	8 cut(s)	157, 209, 503, 577, 1215, 1887, 2926, 3015
ApaLI	GTGCAC	2 cut(s)	583, 993
ApeKI	GCWGC	6 cut(s)	358, 1322, 1503, 2579, 2611, 2933
ApoI	RAATTY	8 cut(s)	1445, 2019, 2060, 2171, 2202, 2309, 2528, 3089
AseI	ATTAAT	1 cut(s)	2187
Asp700I	GAANNNNTTC	2 cut(s)	1848, 2061
AspLEI	GCGC	4 cut(s)	244, 358, 2956, 3156
AspS9I	GGNCC	6 cut(s)	193, 347, 503, 577, 1215, 1888
AsuC2I	CCSGG	1 cut(s)	2912
AsuHPI	GGTGA	6 cut(s)	262, 491, 917, 1152, 1255, 2093
AsuII	TTCGAA	1 cut(s)	2642
AvaII	GGWCC	2 cut(s)	193, 347
AxyI	CCTNAGG	1 cut(s)	1239
BaeGI	GKGCMC	3 cut(s)	587, 997, 2478
BalI	TGGCCA	1 cut(s)	2928
BanII	GRGCYC	2 cut(s)	102, 2000
BauI	CACGAG	2 cut(s)	164, 996
BbrPI	CACGTG	1 cut(s)	1328
BbsI	GAAGAC	2 cut(s)	467, 1575
Bbv12I	GWGCWC	5 cut(s)	102, 587, 997, 1196, 2000
BbvI	GCAGC	6 cut(s)	370, 1309, 1515, 2566, 2623, 2920
BceAI	ACGGC	2 cut(s)	144, 196
BcgI	CGANNNNNNTGC	2 cut(s)	629, 663
BciT130I	CCWGG	5 cut(s)	191, 525, 1679, 1694, 1775
BciVI	GTATCC	1 cut(s)	2953
BclI	TGATCA	3 cut(s)	915, 1399, 2386
BcnI	CCSGG	1 cut(s)	2912
BcoDI	GTCTC	5 cut(s)	294, 1162, 1836, 2123, 2897
BfaI	CTAG	7 cut(s)	666, 846, 981, 1101, 1427, 2066, 2181
BfmI	CTRYAG	4 cut(s)	675, 1152, 2609, 2775
BfrI	CTTAAG	1 cut(s)	1304
BfuAI	ACCTGC	1 cut(s)	238
BfuI	GTATCC	1 cut(s)	2953
BglII	AGATCT	2 cut(s)	367, 1780
BisI	GCNGC	8 cut(s)	245, 359, 1323, 1504, 2580, 2593, 2612, 2934
BlsI	GCNGC	8 cut(s)	246, 360, 1324, 1505, 2581, 2594, 2613, 2935
BmcAI	AGTACT	2 cut(s)	2213, 2626
Bme1390I	CCNGG	6 cut(s)	191, 525, 1679, 1694, 1775, 2912
Bme18I	GGWCC	2 cut(s)	193, 347
BmgT120I	GGNCC	6 cut(s)	193, 347, 503, 577, 1215, 1888
BmiI	GGNNCC	1 cut(s)	1801
BmrFI	CCNGG	6 cut(s)	191, 525, 1679, 1694, 1775, 2912
BoxI	GACNNNNGTC	1 cut(s)	136
BpiI	GAAGAC	2 cut(s)	467, 1575
BpmI	CTGGAG	7 cut(s)	86, 546, 552, 767, 1026, 1676, 1700
Bpu10I	CCTNAGC	2 cut(s)	1190, 2556
Bpu14I	TTCGAA	1 cut(s)	2642
BpuEI	CTTGAG	3 cut(s)	593, 2202, 2921
BpuMI	CCSGG	1 cut(s)	2912
Bsa29I	ATCGAT	1 cut(s)	315
BsaAI	YACGTR	1 cut(s)	1328
BsaHI	GRCGYC	3 cut(s)	133, 144, 180
BsaI	GGTCTC	1 cut(s)	2123
BsaJI	CCNNGG	2 cut(s)	542, 3036
BsaXI	ACNNNNNCTCC	4 cut(s)	519, 549, 720, 750
Bsc4I	CCNNNNNNNGG	7 cut(s)	530, 1177, 1816, 1897, 2599, 2980, 3038
Bse118I	RCCGGY	2 cut(s)	28, 72
Bse1I	ACTGG	7 cut(s)	103, 454, 580, 771, 1890, 2654, 2974
Bse21I	CCTNAGG	1 cut(s)	1239
Bse3DI	GCAATG	3 cut(s)	297, 2587, 2621
BseBI	CCWGG	5 cut(s)	191, 525, 1679, 1694, 1775
BseCI	ATCGAT	1 cut(s)	315
BseDI	CCNNGG	2 cut(s)	542, 3036
BseGI	GGATG	9 cut(s)	721, 2020, 2422, 2476, 2497, 2529, 2566, 2815, 2842
BseLI	CCNNNNNNNGG	7 cut(s)	530, 1177, 1816, 1897, 2599, 2980, 3038
BseMI	GCAATG	3 cut(s)	297, 2587, 2621
BseNI	ACTGG	7 cut(s)	103, 454, 580, 771, 1890, 2654, 2974
BseRI	GAGGAG	7 cut(s)	135, 644, 695, 764, 923, 1466, 2342
BseSI	GKGCMC	3 cut(s)	587, 997, 2478
BseX3I	CGGCCG	1 cut(s)	157
BseXI	GCAGC	6 cut(s)	370, 1309, 1515, 2566, 2623, 2920
BsgI	GTGCAG	2 cut(s)	409, 1308
Bsh1236I	CGCG	4 cut(s)	242, 1113, 2956, 3154
Bsh1285I	CGRYCG	2 cut(s)	96, 160
BshFI	GGCC	8 cut(s)	159, 211, 505, 579, 1217, 1889, 2928, 3017
BshVI	ATCGAT	1 cut(s)	315
BsiEI	CGRYCG	2 cut(s)	96, 160
BsiHKAI	GWGCWC	5 cut(s)	102, 587, 997, 1196, 2000
BsiSI	CCGG	5 cut(s)	11, 29, 73, 156, 2911
BslFI	GGGAC	1 cut(s)	103
BslI	CCNNNNNNNGG	7 cut(s)	530, 1177, 1816, 1897, 2599, 2980, 3038
BsmAI	GTCTC	5 cut(s)	294, 1162, 1836, 2123, 2897
BsmFI	GGGAC	1 cut(s)	103
BsmI	GAATGC	2 cut(s)	488, 2728
BsnI	GGCC	8 cut(s)	159, 211, 505, 579, 1217, 1889, 2928, 3017
Bso31I	GGTCTC	1 cut(s)	2123
Bsp119I	TTCGAA	1 cut(s)	2642
Bsp1286I	GDGCHC	6 cut(s)	102, 587, 997, 1196, 2000, 2478
Bsp68I	TCGCGA	1 cut(s)	1113
BspANI	GGCC	8 cut(s)	159, 211, 505, 579, 1217, 1889, 2928, 3017
BspDI	ATCGAT	1 cut(s)	315
BspFNI	CGCG	4 cut(s)	242, 1113, 2956, 3154
BspHI	TCATGA	1 cut(s)	1492
BspLI	GGNNCC	1 cut(s)	1801
BspMAI	CTGCAG	3 cut(s)	679, 2613, 2779
BspMI	ACCTGC	1 cut(s)	238
BspPI	GGATC	3 cut(s)	1287, 1542, 2925
BspQI	GCTCTTC	1 cut(s)	2291
BspT104I	TTCGAA	1 cut(s)	2642
BspTI	CTTAAG	1 cut(s)	1304
BspTNI	GGTCTC	1 cut(s)	2123
BsrBI	CCGCTC	2 cut(s)	1360, 2848
BsrDI	GCAATG	3 cut(s)	297, 2587, 2621
BsrFI	RCCGGY	2 cut(s)	28, 72
BsrI	ACTGG	7 cut(s)	103, 454, 580, 771, 1890, 2654, 2974
BssAI	RCCGGY	2 cut(s)	28, 72
BssECI	CCNNGG	2 cut(s)	542, 3036
BssNI	GRCGYC	3 cut(s)	133, 144, 180
BssSI	CACGAG	2 cut(s)	164, 996
BssT1I	CCWWGG	2 cut(s)	542, 3036
Bst2BI	CACGAG	2 cut(s)	164, 996
Bst2UI	CCWGG	5 cut(s)	191, 525, 1679, 1694, 1775
Bst4CI	ACNGT	5 cut(s)	663, 1156, 1488, 2924, 2994
Bst6I	CTCTTC	4 cut(s)	792, 1656, 2291, 2940
BstACI	GRCGYC	3 cut(s)	133, 144, 180
BstAFI	CTTAAG	1 cut(s)	1304
BstBAI	YACGTR	1 cut(s)	1328
BstBI	TTCGAA	1 cut(s)	2642
BstC8I	GCNNGC	8 cut(s)	30, 209, 952, 1094, 1660, 1996, 2541, 3158
BstF5I	GGATG	9 cut(s)	721, 2020, 2422, 2476, 2497, 2529, 2566, 2815, 2842
BstFNI	CGCG	4 cut(s)	242, 1113, 2956, 3154
BstHHI	GCGC	4 cut(s)	244, 358, 2956, 3156
BstMAI	GTCTC	5 cut(s)	294, 1162, 1836, 2123, 2897
BstMCI	CGRYCG	2 cut(s)	96, 160
BstMWI	GCNNNNNNNGC	8 cut(s)	69, 694, 1001, 1214, 1417, 1640, 2075, 2636
BstNI	CCWGG	5 cut(s)	191, 525, 1679, 1694, 1775
BstNSI	RCATGY	5 cut(s)	261, 1076, 1662, 2696, 2825
BstPAI	GACNNNNGTC	1 cut(s)	136
BstSCI	CCNGG	6 cut(s)	189, 523, 1677, 1692, 1773, 2910
BstSFI	CTRYAG	4 cut(s)	675, 1152, 2609, 2775
BstSLI	GKGCMC	3 cut(s)	587, 997, 2478
BstUI	CGCG	4 cut(s)	242, 1113, 2956, 3154
BstV1I	GCAGC	6 cut(s)	370, 1309, 1515, 2566, 2623, 2920
BstV2I	GAAGAC	2 cut(s)	467, 1575
BstX2I	RGATCY	3 cut(s)	367, 1279, 1780
BstXI	CCANNNNNNTGG	1 cut(s)	3070
BstYI	RGATCY	3 cut(s)	367, 1279, 1780
BstZI	CGGCCG	1 cut(s)	157
Bsu15I	ATCGAT	1 cut(s)	315
Bsu36I	CCTNAGG	1 cut(s)	1239
BsuI	GTATCC	1 cut(s)	2953
BsuRI	GGCC	8 cut(s)	159, 211, 505, 579, 1217, 1889, 2928, 3017
BsuTUI	ATCGAT	1 cut(s)	315
BtgZI	GCGATG	1 cut(s)	125
BtsCI	GGATG	9 cut(s)	721, 2020, 2422, 2476, 2497, 2529, 2566, 2815, 2842
BtsI	GCAGTG	2 cut(s)	816, 1971
BtuMI	TCGCGA	1 cut(s)	1113
BveI	ACCTGC	1 cut(s)	238
Cac8I	GCNNGC	8 cut(s)	30, 209, 952, 1094, 1660, 1996, 2541, 3158
CciI	TCATGA	1 cut(s)	1492
CfoI	GCGC	4 cut(s)	244, 358, 2956, 3156
Cfr10I	RCCGGY	2 cut(s)	28, 72
Cfr13I	GGNCC	6 cut(s)	193, 347, 503, 577, 1215, 1888
ClaI	ATCGAT	1 cut(s)	315
CseI	GACGC	3 cut(s)	141, 169, 2668
Csp6I	GTAC	8 cut(s)	268, 398, 453, 592, 1363, 2212, 2603, 2625
CviQI	GTAC	8 cut(s)	268, 398, 453, 592, 1363, 2212, 2603, 2625
EaeI	YGGCCR	2 cut(s)	157, 2926
EagI	CGGCCG	1 cut(s)	157
Eam1104I	CTCTTC	4 cut(s)	792, 1656, 2291, 2940
EarI	CTCTTC	4 cut(s)	792, 1656, 2291, 2940
EciI	GGCGGA	1 cut(s)	1140
Ecl136II	GAGCTC	2 cut(s)	100, 1998
EclXI	CGGCCG	1 cut(s)	157
Eco130I	CCWWGG	2 cut(s)	542, 3036
Eco24I	GRGCYC	2 cut(s)	102, 2000
Eco31I	GGTCTC	1 cut(s)	2123
Eco47I	GGWCC	2 cut(s)	193, 347
Eco52I	CGGCCG	1 cut(s)	157
Eco53kI	GAGCTC	2 cut(s)	100, 1998
Eco57I	CTGAAG	4 cut(s)	1584, 1616, 1835, 2801
Eco72I	CACGTG	1 cut(s)	1328
Eco81I	CCTNAGG	1 cut(s)	1239
EcoICRI	GAGCTC	2 cut(s)	100, 1998
EcoO109I	RGGNCCY	1 cut(s)	193
EcoRII	CCWGG	5 cut(s)	189, 523, 1677, 1692, 1773
EcoT14I	CCWWGG	2 cut(s)	542, 3036
EcoT38I	GRGCYC	2 cut(s)	102, 2000
ErhI	CCWWGG	2 cut(s)	542, 3036
FalI	AAGNNNNNCTT	4 cut(s)	920, 952, 2450, 2482
FaqI	GGGAC	1 cut(s)	103
FauI	CCCGC	3 cut(s)	33, 2841, 2949
FauNDI	CATATG	1 cut(s)	3109
FbaI	TGATCA	3 cut(s)	915, 1399, 2386
FblI	GTMKAC	1 cut(s)	942
Fnu4HI	GCNGC	8 cut(s)	245, 359, 1323, 1504, 2580, 2593, 2612, 2934
FokI	GGATG	9 cut(s)	728, 2027, 2429, 2483, 2504, 2536, 2573, 2822, 2849
FriOI	GRGCYC	2 cut(s)	102, 2000
Fsp4HI	GCNGC	8 cut(s)	245, 359, 1323, 1504, 2580, 2593, 2612, 2934
FspBI	CTAG	7 cut(s)	666, 846, 981, 1101, 1427, 2066, 2181
FspI	TGCGCA	1 cut(s)	357
GlaI	GCGC	4 cut(s)	243, 357, 2955, 3155
GluI	GCNGC	8 cut(s)	245, 359, 1323, 1504, 2580, 2593, 2612, 2934
GsuI	CTGGAG	7 cut(s)	86, 546, 552, 767, 1026, 1676, 1700
HaeIII	GGCC	8 cut(s)	159, 211, 505, 579, 1217, 1889, 2928, 3017
HapII	CCGG	5 cut(s)	11, 29, 73, 156, 2911
HgaI	GACGC	3 cut(s)	141, 169, 2668
HhaI	GCGC	4 cut(s)	244, 358, 2956, 3156
Hin1I	GRCGYC	3 cut(s)	133, 144, 180
Hin6I	GCGC	4 cut(s)	242, 356, 2954, 3154
HinP1I	GCGC	4 cut(s)	242, 356, 2954, 3154
HincII	GTYRAC	1 cut(s)	184
HindII	GTYRAC	1 cut(s)	184
HindIII	AAGCTT	4 cut(s)	1094, 2234, 2354, 2423
HpaII	CCGG	5 cut(s)	11, 29, 73, 156, 2911
HphI	GGTGA	6 cut(s)	262, 491, 917, 1152, 1255, 2093
Hpy166II	GTNNAC	5 cut(s)	184, 585, 943, 995, 1025
Hpy8I	GTNNAC	5 cut(s)	184, 585, 943, 995, 1025
Hpy99I	CGWCG	3 cut(s)	72, 135, 816
HpyCH4III	ACNGT	5 cut(s)	663, 1156, 1488, 2924, 2994
HpyCH4IV	ACGT	7 cut(s)	144, 186, 811, 1196, 1327, 1529, 2478
HpyF10VI	GCNNNNNNNGC	8 cut(s)	69, 694, 1001, 1214, 1417, 1640, 2075, 2636
HpySE526I	ACGT	7 cut(s)	144, 186, 811, 1196, 1327, 1529, 2478
Hsp92I	GRCGYC	3 cut(s)	133, 144, 180
HspAI	GCGC	4 cut(s)	242, 356, 2954, 3154
KroI	GCCGGC	1 cut(s)	28
KroNI	GCCGGC	1 cut(s)	30
Ksp22I	TGATCA	3 cut(s)	915, 1399, 2386
LguI	GCTCTTC	1 cut(s)	2291
Lsp1109I	GCAGC	6 cut(s)	370, 1309, 1515, 2566, 2623, 2920
MaeI	CTAG	7 cut(s)	666, 846, 981, 1101, 1427, 2066, 2181
MaeII	ACGT	7 cut(s)	144, 186, 811, 1196, 1327, 1529, 2478
MbiI	CCGCTC	2 cut(s)	1360, 2848
MfeI	CAATTG	1 cut(s)	2448
MflI	RGATCY	3 cut(s)	367, 1279, 1780
MhlI	GDGCHC	6 cut(s)	102, 587, 997, 1196, 2000, 2478
MlsI	TGGCCA	1 cut(s)	2928
MluNI	TGGCCA	1 cut(s)	2928
MlyI	GAGTC	5 cut(s)	738, 1642, 2660, 3059, 3107
MmeI	TCCRAC	3 cut(s)	1179, 1512, 3056
Mox20I	TGGCCA	1 cut(s)	2928
MreI	CGCCGGCG	1 cut(s)	28
MroNI	GCCGGC	1 cut(s)	28
MroXI	GAANNNNTTC	2 cut(s)	1848, 2061
MscI	TGGCCA	1 cut(s)	2928
MseI	TTAA	4 cut(s)	885, 1305, 2187, 2289
MslI	CAYNNNNRTG	1 cut(s)	3068
Msp20I	TGGCCA	1 cut(s)	2928
MspA1I	CMGCKG	1 cut(s)	1166
MspCI	CTTAAG	1 cut(s)	1304
MspI	CCGG	5 cut(s)	11, 29, 73, 156, 2911
MspR9I	CCNGG	6 cut(s)	191, 525, 1679, 1694, 1775, 2912
MunI	CAATTG	1 cut(s)	2448
Mva1269I	GAATGC	2 cut(s)	488, 2728
MvaI	CCWGG	5 cut(s)	191, 525, 1679, 1694, 1775
MvnI	CGCG	4 cut(s)	242, 1113, 2956, 3154
MwoI	GCNNNNNNNGC	8 cut(s)	69, 694, 1001, 1214, 1417, 1640, 2075, 2636
NaeI	GCCGGC	1 cut(s)	30
NciI	CCSGG	1 cut(s)	2912
NdeI	CATATG	1 cut(s)	3109
NgoMIV	GCCGGC	1 cut(s)	28
NlaIV	GGNNCC	1 cut(s)	1801
NmeAIII	GCCGAG	1 cut(s)	141
NmuCI	GTSAC	8 cut(s)	161, 218, 760, 852, 2269, 2380, 2709, 3051
NruI	TCGCGA	1 cut(s)	1113
NsbI	TGCGCA	1 cut(s)	357
NspI	RCATGY	5 cut(s)	261, 1076, 1662, 2696, 2825
NspV	TTCGAA	1 cut(s)	2642
PaeI	GCATGC	1 cut(s)	1662
PagI	TCATGA	1 cut(s)	1492
PaqCI	CACCTGC	1 cut(s)	238
PciI	ACATGT	3 cut(s)	257, 1072, 2692
PciSI	GCTCTTC	1 cut(s)	2291
PctI	GAATGC	2 cut(s)	488, 2728
PdiI	GCCGGC	1 cut(s)	30
PdmI	GAANNNNTTC	2 cut(s)	1848, 2061
PflFI	GACNNNGTC	1 cut(s)	1488
PflMI	CCANNNNNTGG	3 cut(s)	1177, 1816, 2980
PfoI	TCCNGGA	3 cut(s)	523, 1692, 2910
PkrI	GCNGC	8 cut(s)	246, 360, 1324, 1505, 2581, 2594, 2613, 2935
PleI	GAGTC	5 cut(s)	737, 1642, 2660, 3058, 3107
PmaCI	CACGTG	1 cut(s)	1328
PmlI	CACGTG	1 cut(s)	1328
PpsI	GAGTC	5 cut(s)	737, 1642, 2660, 3058, 3107
Ppu21I	YACGTR	1 cut(s)	1328
PpuMI	RGGWCCY	1 cut(s)	193
PscI	ACATGT	3 cut(s)	257, 1072, 2692
PshAI	GACNNNNGTC	1 cut(s)	136
PshBI	ATTAAT	1 cut(s)	2187
Psp124BI	GAGCTC	2 cut(s)	102, 2000
Psp1406I	AACGTT	1 cut(s)	1529
Psp5II	RGGWCCY	1 cut(s)	193
Psp6I	CCWGG	5 cut(s)	189, 523, 1677, 1692, 1773
PspCI	CACGTG	1 cut(s)	1328
PspGI	CCWGG	5 cut(s)	189, 523, 1677, 1692, 1773
PspN4I	GGNNCC	1 cut(s)	1801
PspPI	GGNCC	6 cut(s)	193, 347, 503, 577, 1215, 1888
PspPPI	RGGWCCY	1 cut(s)	193
PstI	CTGCAG	3 cut(s)	679, 2613, 2779
PsuI	RGATCY	3 cut(s)	367, 1279, 1780
PsyI	GACNNNGTC	1 cut(s)	1488
PvuII	CAGCTG	1 cut(s)	1166
RruI	TCGCGA	1 cut(s)	1113
RsaI	GTAC	8 cut(s)	269, 399, 454, 593, 1364, 2213, 2604, 2626
RsaNI	GTAC	8 cut(s)	268, 398, 453, 592, 1363, 2212, 2603, 2625
RseI	CAYNNNNRTG	1 cut(s)	3068
SacI	GAGCTC	2 cut(s)	102, 2000
SapI	GCTCTTC	1 cut(s)	2291
SaqAI	TTAA	4 cut(s)	885, 1305, 2187, 2289
SatI	GCNGC	8 cut(s)	245, 359, 1323, 1504, 2580, 2593, 2612, 2934
Sau96I	GGNCC	6 cut(s)	193, 347, 503, 577, 1215, 1888
ScaI	AGTACT	2 cut(s)	2213, 2626
SchI	GAGTC	5 cut(s)	738, 1642, 2660, 3059, 3107
ScrFI	CCNGG	6 cut(s)	191, 525, 1679, 1694, 1775, 2912
SduI	GDGCHC	6 cut(s)	102, 587, 997, 1196, 2000, 2478
SfcI	CTRYAG	4 cut(s)	675, 1152, 2609, 2775
SfuI	TTCGAA	1 cut(s)	2642
SgrAI	CRCCGGYG	1 cut(s)	28
SinI	GGWCC	2 cut(s)	193, 347
SmiMI	CAYNNNNRTG	1 cut(s)	3068
SmlI	CTYRAG	4 cut(s)	572, 1304, 2217, 2900
SmoI	CTYRAG	4 cut(s)	572, 1304, 2217, 2900
SphI	GCATGC	1 cut(s)	1662
SspMI	CTAG	7 cut(s)	666, 846, 981, 1101, 1427, 2066, 2181
SstI	GAGCTC	2 cut(s)	102, 2000
StyD4I	CCNGG	6 cut(s)	189, 523, 1677, 1692, 1773, 2910
StyI	CCWWGG	2 cut(s)	542, 3036
TaaI	ACNGT	5 cut(s)	663, 1156, 1488, 2924, 2994
TaiI	ACGT	7 cut(s)	147, 189, 814, 1199, 1330, 1532, 2481
TaqI	TCGA	7 cut(s)	202, 315, 333, 1483, 2093, 2642, 3048
TaqII	GACCGA	2 cut(s)	110, 840
TatI	WGTACW	4 cut(s)	397, 591, 2211, 2624
TauI	GCSGC	2 cut(s)	247, 2595
Tru1I	TTAA	4 cut(s)	885, 1305, 2187, 2289
Tru9I	TTAA	4 cut(s)	885, 1305, 2187, 2289
TseFI	GTSAC	8 cut(s)	161, 218, 760, 852, 2269, 2380, 2709, 3051
TseI	GCWGC	6 cut(s)	358, 1322, 1503, 2579, 2611, 2933
Tsp45I	GTSAC	8 cut(s)	161, 218, 760, 852, 2269, 2380, 2709, 3051
TspGWI	ACGGA	1 cut(s)	56
Tth111I	GACNNNGTC	1 cut(s)	1488
Van91I	CCANNNNNTGG	3 cut(s)	1177, 1816, 2980
Vha464I	CTTAAG	1 cut(s)	1304
VneI	GTGCAC	2 cut(s)	583, 993
VpaK11BI	GGWCC	2 cut(s)	193, 347
VspI	ATTAAT	1 cut(s)	2187
XapI	RAATTY	8 cut(s)	1445, 2019, 2060, 2171, 2202, 2309, 2528, 3089
XbaI	TCTAGA	1 cut(s)	665
XceI	RCATGY	5 cut(s)	261, 1076, 1662, 2696, 2825
XmiI	GTMKAC	1 cut(s)	942
XmnI	GAANNNNTTC	2 cut(s)	1848, 2061
XspI	CTAG	7 cut(s)	666, 846, 981, 1101, 1427, 2066, 2181
ZraI	GACGTC	1 cut(s)	145
ZrmI	AGTACT	2 cut(s)	2213, 2626

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.