Rmu_sc0004816.1_g000011

xyloglucan galactosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004816.1
OG0014475
Physical Location & Seq
Reverse (-)
62887 .. 64849
1963 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1878 bp
atgaggcggcggtcgccgacgaacttcccgtcggagcaaatggagaaggggacggggaggaatcagaatagcaagatttgtttcttggcgtcattgtcggttttcttctggatgctcctgttgtattttcattttattgtgctgggtggtagtactgtggagcaatctgtcaaattacagaatggtcctatgcagcctgtccttgtgaccagtcctcctcggaatggtcctatgtattcggagttgcagcctgtccttgtgaccagtcctcctcgggtggagaagctaaacgccgaatcggagcaaccccctgtgacttatcctcccccatacactgaaccgaagcctactcctgtgaccagtgatcctgagatggagaagcccaccattgtacctgttactcgtaaaattggtcccccttcggagacaacacagagtcgaggggctgagaagtatccgtttatgagggcgctgagaaccgtggagaacaagagtgatccgtgtggcgggaggtacatttatgttcatgaccttccgccgaggtttaatgaggatatgctcaaggagtgtaggagtttgagcctgtggactaatatgtgtaagttcacaaccaatgctgggcttggtcctccgcttgagaatgttgagggggtgtttgagaatacgagctggtatgctacgaaccagtttgctgtggatgtcatattcagcaatcggatgaagcaatatgagtgcttgacaaacgactcatctctggcggcagctgtctttgttcctttttatgcggggtttgatattgcccggtacctttggggaggattcaatatatcaaggagggatgcagcttcactggatctggttgattggcttatgaagaggccagaatggagcgttatgggtggcaaagatcattttcttgttgcaggcaggattacatgggatttccggagacttacagaaaatgaagaggattggggcaataagcttctctttttgccagctgctaaaaatatgtcaatgcttgtggtggaatcaagcccatggaatgccaatgattttggtattccttatcccacatacttccatccagcaaaagatgctgatgtattaatttggcaggaccgcatgagaaacttagagcgtaaatggctcttctcatttgctggtgccccacgtcctggcaatgcgaagtcgattagaggacagattattgatcaatgcaagagctcaaaggttggtaagctgttggaatgcgattttggtgaaagcaagtgtcattcgccaagcagtatcatgcagatgtttcagagctcccttttctgcctgcaacctcagggtgattcatacacacgaagatctgcttttgattcgatgttggctggttgcatacctgtcttcttccatccggggtcagcatacgcgcaatatacttggcatcttccaagagattatacaacatattcagtgttcatcccggagaatgatattcgtaagaagaatattagcatagaggaaaggcttagtcaaattcctcctgagaaggtgaaggccatgagggaggaagttataaaccttattcctaggctggtatatgcggatccccgctctaagttggaaactttcaaagatgcatttgatgtttctgtacaagcaataatcgacaaggttacaagggcaaggagggacatggttgaaggccgtacagatgataactttattgaggagattagttggaagtatgctttgttggaggagggacagcgtgaggttggacctcatgaatgggatcctttctttgcaaagcagaaggatggcaatggcgattctggtgaagctgcaaaaaattcttgggagaatgaacagcgacaacactcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000139 GO:0000271 GO:0000902 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0005996 GO:0006004 GO:0006073 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009653 GO:0009719 GO:0009725 GO:0009751 GO:0009826 GO:0009863 GO:0009969 GO:0009987 GO:0010033 GO:0010256 GO:0010383 GO:0010410 GO:0010411 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016043 GO:0016049 GO:0016051 GO:0016740 GO:0016757 GO:0019318 GO:0019319 GO:0023052 GO:0030173 GO:0031090 GO:0031224 GO:0031228 GO:0031300 GO:0031301 GO:0031410 GO:0031982 GO:0031984 GO:0032502 GO:0032870 GO:0032989 GO:0033692 GO:0034637 GO:0034645 GO:0035690 GO:0040007 GO:0042221 GO:0042353 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046364 GO:0046677 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060560 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071554 GO:0071704 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:1901576 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

625

Amino Acids

71.41

Weight (kDa)

6.38

Isoelectric Point (pI)

51.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 168 - 506 8.4e-88 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014475)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G20370
fragaria_vesca FvH4_2g20390
malus_domestica MD05G1187900.v1.1 MD10G1175500.v1.1
pyrus_communis pycom05g17260 pycom10g15130
rosa_chinensis RchiOBHm_Chr6g0286491
rosa_laevigata RLG00000012565
rosa_multiflora Rmu_sc0004816.1_g000011
rosa_roxburghii Rroxscaffold_7G00182280
rosa_rugosa Rorug06G0180200 Rorug06G0180300
rosa_samantha Rh6AG292600 Rh6BG296100 Rh6CG296900 Rh6DG288600
rosa_wichuraiana Rw6G025220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1568
Acc65I GGTACC 1 cut(s) 804
AccB1I GGYRCC 2 cut(s) 804, 1166
AccB7I CCANNNNNTGG 1 cut(s) 1178
AccBSI CCGCTC 1 cut(s) 1605
AccII CGCG 1 cut(s) 1421
AccIII TCCGGA 1 cut(s) 945
AclWI GGATC 7 cut(s) 359, 491, 861, 1592, 1605, 1781, 1794
AcsI RAATTY 2 cut(s) 1527, 1843
AcyI GRCGYC 1 cut(s) 89
AfaI GTAC 6 cut(s) 154, 393, 515, 806, 1647, 1702
AfiI CCNNNNNNNGG 4 cut(s) 224, 506, 618, 1178
AgsI TTSAA 3 cut(s) 823, 1624, 1694
AjiI CACGTC 1 cut(s) 1175
AjnI CCWGG 1 cut(s) 1177
AjuI GAANNNNNNNTTGG 2 cut(s) 1242, 1274
Alw21I GWGCWC 2 cut(s) 1229, 1313
Alw26I GTCTC 2 cut(s) 419, 943
AlwI GGATC 7 cut(s) 359, 491, 861, 1592, 1605, 1781, 1794
Ama87I CYCGRG 1 cut(s) 273
Aor13HI TCCGGA 1 cut(s) 945
AoxI GGCC 3 cut(s) 878, 1548, 1696
ApeKI GCWGC 6 cut(s) 193, 247, 761, 842, 1001, 1835
ApoI RAATTY 2 cut(s) 1527, 1843
ArsI GACNNNNNNTTYG 2 cut(s) 14, 46
AseI ATTAAT 1 cut(s) 1109
Asp718I GGTACC 1 cut(s) 804
AspA2I CCTAGG 1 cut(s) 1580
AspLEI GCGC 2 cut(s) 472, 1423
AspS9I GGNCC 6 cut(s) 185, 227, 413, 626, 1120, 1772
AsuC2I CCSGG 3 cut(s) 802, 1407, 1475
AsuHPI GGTGA 4 cut(s) 1274, 1349, 1555, 1841
AvaI CYCGRG 1 cut(s) 273
AvaII GGWCC 6 cut(s) 185, 227, 413, 626, 1120, 1772
AvrII CCTAGG 1 cut(s) 1580
AxyI CCTNAGG 1 cut(s) 1332
BaeGI GKGCMC 1 cut(s) 1171
BaeI ACNNNNGTAYC 2 cut(s) 375, 408
BamHI GGATCC 2 cut(s) 1597, 1786
BanI GGYRCC 2 cut(s) 804, 1166
BanII GRGCYC 2 cut(s) 1229, 1313
BbsI GAAGAC 1 cut(s) 1387
Bbv12I GWGCWC 2 cut(s) 1229, 1313
BbvI GCAGC 6 cut(s) 205, 259, 773, 854, 988, 1822
BccI CCATC 4 cut(s) 367, 1092, 1410, 1805
BceAI ACGGC 1 cut(s) 1683
BciT130I CCWGG 1 cut(s) 1179
BciVI GTATCC 1 cut(s) 465
BclI TGATCA 1 cut(s) 1213
BcnI CCSGG 3 cut(s) 802, 1407, 1475
BcoDI GTCTC 2 cut(s) 419, 943
BfaI CTAG 1 cut(s) 1581
BfoI RGCGCY 1 cut(s) 473
BfuI GTATCC 1 cut(s) 465
BglII AGATCT 1 cut(s) 1355
BisI GCNGC 8 cut(s) 8, 194, 248, 759, 762, 843, 1002, 1836
BlnI CCTAGG 1 cut(s) 1580
BlsI GCNGC 8 cut(s) 9, 195, 249, 760, 763, 844, 1003, 1837
BmcAI AGTACT 1 cut(s) 154
Bme1390I CCNGG 4 cut(s) 802, 1179, 1407, 1475
Bme18I GGWCC 6 cut(s) 185, 227, 413, 626, 1120, 1772
BmeT110I CYCGRG 1 cut(s) 273
BmgBI CACGTC 1 cut(s) 1175
BmgT120I GGNCC 6 cut(s) 185, 227, 413, 626, 1120, 1772
BmiI GGNNCC 5 cut(s) 415, 806, 1168, 1599, 1788
BmrFI CCNGG 4 cut(s) 802, 1179, 1407, 1475
BmsI GCATC 5 cut(s) 102, 829, 1087, 1444, 1618
BpiI GAAGAC 1 cut(s) 1387
BpuEI CTTGAG 2 cut(s) 545, 656
BpuMI CCSGG 3 cut(s) 802, 1407, 1475
BsaHI GRCGYC 1 cut(s) 89
BsaJI CCNNGG 7 cut(s) 218, 272, 480, 539, 1040, 1406, 1580
BsaWI WCCGGW 1 cut(s) 945
BsaXI ACNNNNNCTCC 6 cut(s) 199, 229, 253, 283, 307, 337
Bsc4I CCNNNNNNNGG 4 cut(s) 224, 506, 618, 1178
Bse1I ACTGG 5 cut(s) 210, 264, 360, 685, 855
Bse21I CCTNAGG 1 cut(s) 1332
Bse3DI GCAATG 2 cut(s) 1189, 1822
BseAI TCCGGA 1 cut(s) 945
BseBI CCWGG 1 cut(s) 1179
BseDI CCNNGG 7 cut(s) 218, 272, 480, 539, 1040, 1406, 1580
BseGI GGATG 8 cut(s) 117, 703, 723, 844, 1084, 1402, 1470, 1816
BseLI CCNNNNNNNGG 4 cut(s) 224, 506, 618, 1178
BseMI GCAATG 2 cut(s) 1189, 1822
BseMII CTCAG 5 cut(s) 360, 438, 464, 1346, 1527
BseNI ACTGG 5 cut(s) 210, 264, 360, 685, 855
BseRI GAGGAG 4 cut(s) 207, 261, 1736, 1766
BseSI GKGCMC 1 cut(s) 1171
BseXI GCAGC 6 cut(s) 205, 259, 773, 854, 988, 1822
BseYI CCCAGC 2 cut(s) 142, 617
Bsh1236I CGCG 1 cut(s) 1421
Bsh1285I CGRYCG 1 cut(s) 14
BshFI GGCC 3 cut(s) 880, 1550, 1698
BshNI GGYRCC 2 cut(s) 804, 1166
BsiEI CGRYCG 1 cut(s) 14
BsiHKAI GWGCWC 2 cut(s) 1229, 1313
BsiHKCI CYCGRG 1 cut(s) 273
BsiSI CCGG 4 cut(s) 802, 946, 1406, 1475
BslFI GGGAC 4 cut(s) 64, 399, 1697, 1770
BslI CCNNNNNNNGG 4 cut(s) 224, 506, 618, 1178
BsmAI GTCTC 2 cut(s) 419, 943
BsmFI GGGAC 4 cut(s) 64, 399, 1697, 1770
BsmI GAATGC 2 cut(s) 1051, 1256
BsnI GGCC 3 cut(s) 880, 1550, 1698
BsoBI CYCGRG 1 cut(s) 273
Bsp1286I GDGCHC 3 cut(s) 1171, 1229, 1313
Bsp13I TCCGGA 1 cut(s) 945
Bsp1407I TGTACA 1 cut(s) 1645
Bsp143I GATC 8 cut(s) 364, 496, 853, 907, 1213, 1355, 1597, 1786
Bsp19I CCATGG 1 cut(s) 1040
BspANI GGCC 3 cut(s) 880, 1550, 1698
BspCNI CTCAG 5 cut(s) 361, 439, 465, 1345, 1528
BspEI TCCGGA 1 cut(s) 945
BspFNI CGCG 1 cut(s) 1421
BspHI TCATGA 3 cut(s) 526, 1777, 1874
BspLI GGNNCC 5 cut(s) 415, 806, 1168, 1599, 1788
BspPI GGATC 7 cut(s) 359, 491, 861, 1592, 1605, 1781, 1794
BspQI GCTCTTC 1 cut(s) 1157
BspT107I GGYRCC 2 cut(s) 804, 1166
BsrBI CCGCTC 1 cut(s) 1605
BsrDI GCAATG 2 cut(s) 1189, 1822
BsrGI TGTACA 1 cut(s) 1645
BsrI ACTGG 5 cut(s) 210, 264, 360, 685, 855
BssECI CCNNGG 7 cut(s) 218, 272, 480, 539, 1040, 1406, 1580
BssMI GATC 8 cut(s) 364, 496, 853, 907, 1213, 1355, 1597, 1786
BssNI GRCGYC 1 cut(s) 89
BssT1I CCWWGG 2 cut(s) 1040, 1580
Bst2UI CCWGG 1 cut(s) 1179
Bst4CI ACNGT 2 cut(s) 157, 481
Bst6I CTCTTC 3 cut(s) 869, 960, 1157
BstACI GRCGYC 1 cut(s) 89
BstAPI GCANNNNNTGC 1 cut(s) 1097
BstAUI TGTACA 1 cut(s) 1645
BstC8I GCNNGC 3 cut(s) 925, 999, 1325
BstDEI CTNAG 8 cut(s) 369, 447, 473, 1135, 1332, 1520, 1536, 1608
BstDSI CCRYGG 2 cut(s) 480, 1040
BstF5I GGATG 8 cut(s) 117, 703, 723, 844, 1084, 1402, 1470, 1816
BstFNI CGCG 1 cut(s) 1421
BstH2I RGCGCY 1 cut(s) 473
BstHHI GCGC 2 cut(s) 472, 1423
BstKTI GATC 8 cut(s) 367, 499, 856, 910, 1216, 1358, 1600, 1789
BstMAI GTCTC 2 cut(s) 419, 943
BstMBI GATC 8 cut(s) 364, 496, 853, 907, 1213, 1355, 1597, 1786
BstMCI CGRYCG 1 cut(s) 14
BstMWI GCNNNNNNNGC 3 cut(s) 13, 1097, 1147
BstNI CCWGG 1 cut(s) 1179
BstSCI CCNGG 4 cut(s) 800, 1177, 1405, 1473
BstSLI GKGCMC 1 cut(s) 1171
BstUI CGCG 1 cut(s) 1421
BstV1I GCAGC 6 cut(s) 205, 259, 773, 854, 988, 1822
BstV2I GAAGAC 1 cut(s) 1387
BstX2I RGATCY 4 cut(s) 853, 1355, 1597, 1786
BstYI RGATCY 4 cut(s) 853, 1355, 1597, 1786
Bsu36I CCTNAGG 1 cut(s) 1332
BsuI GTATCC 1 cut(s) 465
BsuRI GGCC 3 cut(s) 880, 1550, 1698
BtgI CCRYGG 2 cut(s) 480, 1040
BtrI CACGTC 1 cut(s) 1175
BtsCI GGATG 8 cut(s) 117, 703, 723, 844, 1084, 1402, 1470, 1816
BtsIMutI CAGTG 4 cut(s) 333, 367, 848, 1470
Cac8I GCNNGC 3 cut(s) 925, 999, 1325
CciI TCATGA 3 cut(s) 526, 1777, 1874
CfoI GCGC 2 cut(s) 472, 1423
Cfr13I GGNCC 6 cut(s) 185, 227, 413, 626, 1120, 1772
CseI GACGC 1 cut(s) 78
Csp6I GTAC 6 cut(s) 153, 392, 514, 805, 1646, 1701
CspCI CAANNNNNGTGG 2 cut(s) 1005, 1040
CviAII CATG 9 cut(s) 527, 936, 1041, 1126, 1294, 1552, 1687, 1778, 1875
CviQI GTAC 6 cut(s) 153, 392, 514, 805, 1646, 1701
DdeI CTNAG 8 cut(s) 369, 447, 473, 1135, 1332, 1520, 1536, 1608
DpnI GATC 8 cut(s) 366, 498, 855, 909, 1215, 1357, 1599, 1788
DpnII GATC 8 cut(s) 364, 496, 853, 907, 1213, 1355, 1597, 1786
Eam1104I CTCTTC 3 cut(s) 869, 960, 1157
EarI CTCTTC 3 cut(s) 869, 960, 1157
EciI GGCGGA 1 cut(s) 525
Ecl136II GAGCTC 2 cut(s) 1227, 1311
Eco130I CCWWGG 2 cut(s) 1040, 1580
Eco24I GRGCYC 2 cut(s) 1229, 1313
Eco47I GGWCC 6 cut(s) 185, 227, 413, 626, 1120, 1772
Eco53kI GAGCTC 2 cut(s) 1227, 1311
Eco81I CCTNAGG 1 cut(s) 1332
Eco88I CYCGRG 1 cut(s) 273
EcoICRI GAGCTC 2 cut(s) 1227, 1311
EcoRII CCWGG 1 cut(s) 1177
EcoT14I CCWWGG 2 cut(s) 1040, 1580
EcoT22I ATGCAT 1 cut(s) 1633
EcoT38I GRGCYC 2 cut(s) 1229, 1313
ErhI CCWWGG 2 cut(s) 1040, 1580
FaeI CATG 9 cut(s) 530, 939, 1044, 1129, 1297, 1555, 1690, 1781, 1878
FalI AAGNNNNNCTT 4 cut(s) 974, 1006, 1345, 1377
FaqI GGGAC 4 cut(s) 64, 399, 1697, 1770
FatI CATG 9 cut(s) 526, 935, 1040, 1125, 1293, 1551, 1686, 1777, 1874
FauI CCCGC 3 cut(s) 500, 778, 1610
FbaI TGATCA 1 cut(s) 1213
Fnu4HI GCNGC 8 cut(s) 8, 194, 248, 759, 762, 843, 1002, 1836
FokI GGATG 8 cut(s) 124, 710, 730, 851, 1071, 1389, 1457, 1823
FriOI GRGCYC 2 cut(s) 1229, 1313
Fsp4HI GCNGC 8 cut(s) 8, 194, 248, 759, 762, 843, 1002, 1836
FspBI CTAG 1 cut(s) 1581
GlaI GCGC 2 cut(s) 471, 1422
GluI GCNGC 8 cut(s) 8, 194, 248, 759, 762, 843, 1002, 1836
GsaI CCCAGC 2 cut(s) 146, 621
HaeII RGCGCY 1 cut(s) 473
HaeIII GGCC 3 cut(s) 880, 1550, 1698
HapII CCGG 4 cut(s) 802, 946, 1406, 1475
HgaI GACGC 1 cut(s) 78
HhaI GCGC 2 cut(s) 472, 1423
Hin1I GRCGYC 1 cut(s) 89
Hin1II CATG 9 cut(s) 530, 939, 1044, 1129, 1297, 1555, 1690, 1781, 1878
Hin6I GCGC 2 cut(s) 470, 1421
HinP1I GCGC 2 cut(s) 470, 1421
HindIII AAGCTT 1 cut(s) 983
HinfI GANTC 9 cut(s) 61, 296, 436, 746, 819, 1031, 1340, 1367, 1823
HpaII CCGG 4 cut(s) 802, 946, 1406, 1475
HphI GGTGA 4 cut(s) 1274, 1349, 1555, 1841
Hpy166II GTNNAC 2 cut(s) 588, 606
Hpy188I TCNGA 8 cut(s) 34, 66, 222, 241, 301, 424, 717, 1308
Hpy188III TCNNGA 7 cut(s) 109, 368, 527, 946, 1535, 1778, 1875
Hpy8I GTNNAC 2 cut(s) 588, 606
Hpy99I CGWCG 2 cut(s) 22, 34
HpyAV CCTTC 7 cut(s) 40, 429, 542, 1534, 1540, 1688, 1801
HpyCH4III ACNGT 2 cut(s) 157, 481
HpyCH4IV ACGT 1 cut(s) 1174
HpyF10VI GCNNNNNNNGC 3 cut(s) 13, 1097, 1147
HpyF3I CTNAG 8 cut(s) 369, 447, 473, 1135, 1332, 1520, 1536, 1608
HpySE526I ACGT 1 cut(s) 1174
Hsp92I GRCGYC 1 cut(s) 89
Hsp92II CATG 9 cut(s) 530, 939, 1044, 1129, 1297, 1555, 1690, 1781, 1878
HspAI GCGC 2 cut(s) 470, 1421
Kpn2I TCCGGA 1 cut(s) 945
KpnI GGTACC 1 cut(s) 808
Ksp22I TGATCA 1 cut(s) 1213
Kzo9I GATC 8 cut(s) 364, 496, 853, 907, 1213, 1355, 1597, 1786
LguI GCTCTTC 1 cut(s) 1157
LmnI GCTCC 6 cut(s) 34, 120, 160, 301, 888, 1316
Lsp1109I GCAGC 6 cut(s) 205, 259, 773, 854, 988, 1822
LweI GCATC 5 cut(s) 102, 829, 1087, 1444, 1618
MaeI CTAG 1 cut(s) 1581
MaeII ACGT 1 cut(s) 1174
MaeIII GTNAC 6 cut(s) 205, 259, 313, 355, 397, 1666
MalI GATC 8 cut(s) 366, 498, 855, 909, 1215, 1357, 1599, 1788
MbiI CCGCTC 1 cut(s) 1605
MboI GATC 8 cut(s) 364, 496, 853, 907, 1213, 1355, 1597, 1786
MboII GAAGA 9 cut(s) 97, 886, 977, 1144, 1365, 1387, 1390, 1430, 1507
MflI RGATCY 4 cut(s) 853, 1355, 1597, 1786
MhlI GDGCHC 3 cut(s) 1171, 1229, 1313
MluCI AATT 5 cut(s) 173, 408, 1110, 1527, 1843
MlyI GAGTC 2 cut(s) 445, 740
MmeI TCCRAC 6 cut(s) 12, 1227, 1593, 1712, 1728, 1750
Mph1103I ATGCAT 1 cut(s) 1633
MroI TCCGGA 1 cut(s) 945
MseI TTAA 2 cut(s) 546, 1109
MslI CAYNNNNRTG 1 cut(s) 1298
MspA1I CMGCKG 2 cut(s) 764, 1001
MspI CCGG 4 cut(s) 802, 946, 1406, 1475
MspR9I CCNGG 4 cut(s) 802, 1179, 1407, 1475
Mva1269I GAATGC 2 cut(s) 1051, 1256
MvaI CCWGG 1 cut(s) 1179
MvnI CGCG 1 cut(s) 1421
MwoI GCNNNNNNNGC 3 cut(s) 13, 1097, 1147
NciI CCSGG 3 cut(s) 802, 1407, 1475
NcoI CCATGG 1 cut(s) 1040
NdeII GATC 8 cut(s) 364, 496, 853, 907, 1213, 1355, 1597, 1786
NlaIII CATG 9 cut(s) 530, 939, 1044, 1129, 1297, 1555, 1690, 1781, 1878
NlaIV GGNNCC 5 cut(s) 415, 806, 1168, 1599, 1788
NmeAIII GCCGAG 1 cut(s) 564
NmuCI GTSAC 4 cut(s) 205, 259, 313, 355
NsiI ATGCAT 1 cut(s) 1633
PagI TCATGA 3 cut(s) 526, 1777, 1874
PciSI GCTCTTC 1 cut(s) 1157
PcsI WCGNNNNNNNCGW 1 cut(s) 26
PctI GAATGC 2 cut(s) 1051, 1256
PfeI GAWTC 7 cut(s) 61, 296, 819, 1031, 1340, 1367, 1823
PflMI CCANNNNNTGG 1 cut(s) 1178
PfoI TCCNGGA 1 cut(s) 1473
PkrI GCNGC 8 cut(s) 9, 195, 249, 760, 763, 844, 1003, 1837
PleI GAGTC 2 cut(s) 444, 740
PpsI GAGTC 2 cut(s) 444, 740
PshBI ATTAAT 1 cut(s) 1109
PsiI TTATAA 1 cut(s) 1568
Psp124BI GAGCTC 2 cut(s) 1229, 1313
Psp6I CCWGG 1 cut(s) 1177
PspFI CCCAGC 2 cut(s) 142, 617
PspGI CCWGG 1 cut(s) 1177
PspN4I GGNNCC 5 cut(s) 415, 806, 1168, 1599, 1788
PspPI GGNCC 6 cut(s) 185, 227, 413, 626, 1120, 1772
PsuI RGATCY 4 cut(s) 853, 1355, 1597, 1786
PvuII CAGCTG 2 cut(s) 764, 1001
RsaI GTAC 6 cut(s) 154, 393, 515, 806, 1647, 1702
RsaNI GTAC 6 cut(s) 153, 392, 514, 805, 1646, 1701
RseI CAYNNNNRTG 1 cut(s) 1298
SacI GAGCTC 2 cut(s) 1229, 1313
SapI GCTCTTC 1 cut(s) 1157
SaqAI TTAA 2 cut(s) 546, 1109
SatI GCNGC 8 cut(s) 8, 194, 248, 759, 762, 843, 1002, 1836
Sau3AI GATC 8 cut(s) 364, 496, 853, 907, 1213, 1355, 1597, 1786
Sau96I GGNCC 6 cut(s) 185, 227, 413, 626, 1120, 1772
ScaI AGTACT 1 cut(s) 154
SchI GAGTC 2 cut(s) 445, 740
ScrFI CCNGG 4 cut(s) 802, 1179, 1407, 1475
SduI GDGCHC 3 cut(s) 1171, 1229, 1313
SfaNI GCATC 5 cut(s) 102, 829, 1087, 1444, 1618
SinI GGWCC 6 cut(s) 185, 227, 413, 626, 1120, 1772
SmiMI CAYNNNNRTG 1 cut(s) 1298
SmlI CTYRAG 2 cut(s) 560, 635
SmoI CTYRAG 2 cut(s) 560, 635
Sse9I AATT 5 cut(s) 173, 408, 1110, 1527, 1843
SspI AATATT 1 cut(s) 1501
SspMI CTAG 1 cut(s) 1581
SstI GAGCTC 2 cut(s) 1229, 1313
StyD4I CCNGG 4 cut(s) 800, 1177, 1405, 1473
StyI CCWWGG 2 cut(s) 1040, 1580
TaaI ACNGT 2 cut(s) 157, 481
TaiI ACGT 1 cut(s) 1177
TaqI TCGA 4 cut(s) 439, 1193, 1370, 1659
TasI AATT 5 cut(s) 173, 408, 1110, 1527, 1843
TatI WGTACW 2 cut(s) 152, 1645
TauI GCSGC 2 cut(s) 10, 761
TfiI GAWTC 7 cut(s) 61, 296, 819, 1031, 1340, 1367, 1823
Tru1I TTAA 2 cut(s) 546, 1109
Tru9I TTAA 2 cut(s) 546, 1109
TscAI CASTG 4 cut(s) 340, 367, 855, 1470
TseFI GTSAC 4 cut(s) 205, 259, 313, 355
TseI GCWGC 6 cut(s) 193, 247, 761, 842, 1001, 1835
Tsp45I GTSAC 4 cut(s) 205, 259, 313, 355
TspDTI ATGAA 9 cut(s) 119, 515, 734, 887, 978, 1332, 1459, 1794, 1872
TspGWI ACGGA 2 cut(s) 447, 489
TspRI CASTG 4 cut(s) 340, 367, 855, 1470
Van91I CCANNNNNTGG 1 cut(s) 1178
VpaK11BI GGWCC 6 cut(s) 185, 227, 413, 626, 1120, 1772
VspI ATTAAT 1 cut(s) 1109
XapI RAATTY 2 cut(s) 1527, 1843
XmaJI CCTAGG 1 cut(s) 1580
XspI CTAG 1 cut(s) 1581
ZrmI AGTACT 1 cut(s) 154
Zsp2I ATGCAT 1 cut(s) 1633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.