Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004874.1

Orthogroup ID

OG0016635

Physical Location & Seq

Genomic Coordinates Forward (+)

24451 .. 30439

Gene Structure 5989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004874.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

atgaaaccactatttctgttgatcgtagcgttttctgtgttgattcgatcaaacggcgccgttttgtcgtcttcttcttcatcgccgtcgcggcagcagcgtaccacggaggcttacgtcacgctgctgtacggcgatgagttcctgctgggcgtccgagtgctcggcaaatcgatacgcgacaccggatccaccaaggacatggtcgtcctcgtctccgacggcgtctccgcctacgccatgaagctcctcaaggctgatggatggatagtggagaagattagtctattggcgaatcctaatcaagtgaggccgacgagattctggggtgtctacacaaagctgaagattttcaacatgactaactacaagaaagttgtgtatcttgatgcggatactattgtggtgaaaagtgttgaggatcttttcaaatgcagcaagttctgtgctaacttgaagcattctgagaggctgaactctggagtgatggtggtggaaccgtctgaacgtgtatttcaggacatgatggggaaagtgaccactttggaatcttacactggaggagatcaggggtttctgaattcctattactcagattttcccaatgcgcatgttttcgagccaaacttagcaccagaggttcgcaagtctaggccagttccagaaatggagcgtctttcaacattatataatgcagatgttggtctctatatgctagcaaacaagtggatggttaatgaaagtgaactccgtgtcattcactataccctcggtcccctcaaaccttgggattggtggacatcttggcttttgaaacccgttgatgtctggcagaatgttagggaagggcttaaggactcccttccgggaactggaggaggcagaaatccaaatgatgctcttgttgtcaaaattcttttctcagttccagttttggctctactcttttgttactatcgatcttttcttcagacacgggaatactttggatccttatgtcgaagttcattttatgaccaaatcaaacacgtatattacaaaattagatccactgggactcttaactacacgagtgtttctacgtcatccaccattaatgccagtaatcagagcaaggttccttgttacttgggcggaatgtctattgttgcctgtttcatggcctttgtggtggcccttgtggttgctcttgcagttgtacctcgacaagttatgccatggactggtttactattgatgtacgagtggacatttacaatcttcttcttattgtttggaggatatctccatctagtttatcaatgggggaggacaacagcagtgcaatcaacactttcctctggtcctgaatcagttgatgatgattctggaaaaggtcatcaacggcaagtatcattgtgtgatagtgcttcattgtattatgggctaggaatggcttttctggctgttgctgccccatctttgccatgtctttttggtatcactgctctatttttaaggttaggtttaatggttgttggaggcctaatcttggcatctttcatgacatatgcgtcggagcaccttgcaactagatcattcttgagaggccttgaagaccgagatgctatgagaactagttttgcctcgtcgccggccctcctaggcgatgatgtggtggatatctccaagatgccgagagcggaaaccaggaacaaggtactacgcggaggttcttggtattttcagcatgcaccagtgatcatccatgactatgatggcttgacatctcctgctgcaatcccaatggatgaactgttcttttggatgaagctgcgtaatataccaccagccttggaggtagccaaaccgtccttcctgacaaaaaccctaaagttagcaccaagagttattgagaaaatctccttcttctttgaaaatctgattggacgttgtaaagagtgtggtttcatctttcatgagaacggggcatgccagctcgcaggtaaaagtgagcaatcaaaccctaaccccaagttatctgaaaacaaaatggaactgcctaggtcttttgcaggtttcgtacattgcaacttttcttgtggtgcttttaggtttcatggtattcaaacgcctatcctgccttctgtggcaagtaatttgtttggccctagtttgtcatccaaactgcgcaagccactgatccttcgtcatgcaactctttctgaacagtctcctttgaagcgaggaagacctaccgctccttttgtctctccaaagaaacctcgggtaatgcttaatgagcttgtagttggcggtagtggttcccctgcaccaactaaaaaggtcaggatgcctgcggactcgttcaagctctctgctaatttgttggggctagttgaagcaccgggtggcatgcttgtacctgcagaagtgatgatgccccgaggagttgcccctgaacactccatcaaaaagaaacaaggaaggcctctagggtccaaaaacaagaatcctcctaaaccaaacatacatgtctctgctgaagatgtgctttcctttcttcattcggggaagcctgctagccctggcatgaagggcaaagaaaagatgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005488 GO:0005536 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0005977 GO:0005978 GO:0006073 GO:0006091 GO:0006112 GO:0006629 GO:0006643 GO:0006665 GO:0006672 GO:0006807 GO:0008150 GO:0008152 GO:0008194 GO:0008466 GO:0008610 GO:0009058 GO:0009059 GO:0009250 GO:0009987 GO:0012505 GO:0015020 GO:0015980 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0030148 GO:0030246 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034641 GO:0034645 GO:0035251 GO:0036094 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044262 GO:0044264 GO:0044271 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046467 GO:0046513 GO:0046527 GO:0048029 GO:0055114 GO:0071704 GO:0097708 GO:0098791 GO:1901564 GO:1901566 GO:1901576 GO:1990482

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_8

Protein Analysis

864

Amino Acids

95.66

Weight (kDa)

9.46

Isoelectric Point (pI)

42.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016635)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18480
fragaria_vesca	FvH4_6g01530
malus_domestica	MD04G1232600.v1.1 MD12G1250100.v1.1
prunus_persica	Prupe.6G352300_v2.0.a1
pyrus_communis	pycom04g20590 pycom12g23030
rosa_chinensis	RchiOBHm_Chr3g0449231
rosa_laevigata	RLG00000025844
rosa_multiflora	Rmu_sc0004874.1_g000006
rosa_roxburghii	Rroxscaffold_6G00427270
rosa_rugosa	Rorug02G0619000
rosa_samantha	Rh3CG016300
rosa_wichuraiana	Rw3G001310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	206, 1552
Acc16I	TGCGCA	2 cut(s)	609, 2171
Acc36I	ACCTGC	3 cut(s)	1973, 2045, 2413
AccB1I	GGYRCC	1 cut(s)	56
AccB7I	CCANNNNNTGG	1 cut(s)	1223
AccBSI	CCGCTC	2 cut(s)	1682, 2240
AccI	GTMKAC	1 cut(s)	333
AccII	CGCG	3 cut(s)	91, 180, 1707
AciI	CCGC	9 cut(s)	91, 231, 392, 1134, 1682, 1707, 2238, 2295, 2339
AclWI	GGATC	7 cut(s)	183, 196, 429, 984, 997, 1041, 2176
AcsI	RAATTY	2 cut(s)	580, 912
AcuI	CTGAAG	3 cut(s)	365, 953, 2544
AcyI	GRCGYC	3 cut(s)	57, 153, 225
AdeI	CACNNNGTG	1 cut(s)	2390
AfaI	GTAC	7 cut(s)	103, 131, 1200, 1241, 1701, 2064, 2403
AfiI	CCNNNNNNNGG	3 cut(s)	872, 1223, 1531
AflII	CTTAAG	1 cut(s)	851
AflIII	ACRYGT	3 cut(s)	508, 1027, 2512
AhlI	ACTAGT	1 cut(s)	1616
AjnI	CCWGG	2 cut(s)	1688, 2566
AjuI	GAANNNNNNNTTGG	4 cut(s)	1838, 1870, 1908, 1940
AloI	GAACNNNNNNTCC	2 cut(s)	1781, 1813
AluBI	AGCT	6 cut(s)	247, 343, 1813, 1978, 2284, 2353
AluI	AGCT	6 cut(s)	247, 343, 1813, 1978, 2284, 2353
Alw21I	GWGCWC	2 cut(s)	165, 1563
Alw26I	GTCTC	6 cut(s)	220, 232, 710, 2217, 2254, 2521
AlwI	GGATC	7 cut(s)	183, 196, 429, 984, 997, 1041, 2176
Ama87I	CYCGRG	2 cut(s)	2265, 2424
AoxI	GGCC	9 cut(s)	311, 653, 1161, 1173, 1522, 1588, 1635, 2146, 2468
ApeKI	GCWGC	7 cut(s)	94, 97, 124, 435, 1451, 1775, 1813
ApoI	RAATTY	2 cut(s)	580, 912
AseI	ATTAAT	1 cut(s)	1095
Asp700I	GAANNNNTTC	1 cut(s)	350
AspA2I	CCTAGG	2 cut(s)	1642, 2042
AspLEI	GCGC	3 cut(s)	59, 610, 2172
AspS9I	GGNCC	6 cut(s)	773, 1174, 1343, 1636, 2147, 2478
AsuC2I	CCSGG	2 cut(s)	867, 2388
AsuHPI	GGTGA	1 cut(s)	418
AsuNHI	GCTAGC	2 cut(s)	715, 2561
AvaI	CYCGRG	2 cut(s)	2265, 2424
AvaII	GGWCC	3 cut(s)	773, 1343, 2478
AvrII	CCTAGG	2 cut(s)	1642, 2042
BaeI	ACNNNNGTAYC	2 cut(s)	387, 420
BamHI	GGATCC	2 cut(s)	188, 989
BanI	GGYRCC	1 cut(s)	56
BauI	CACGAG	1 cut(s)	1069
BbsI	GAAGAC	3 cut(s)	63, 1602, 2236
Bbv12I	GWGCWC	2 cut(s)	165, 1563
BbvI	GCAGC	7 cut(s)	106, 109, 111, 447, 1438, 1762, 1800
BccI	CCATC	9 cut(s)	254, 258, 481, 520, 724, 1296, 1465, 1751, 2456
BceAI	ACGGC	6 cut(s)	44, 70, 70, 148, 238, 1400
BciT130I	CCWGG	2 cut(s)	1690, 2568
BciVI	GTATCC	1 cut(s)	388
BclI	TGATCA	1 cut(s)	1740
BcnI	CCSGG	2 cut(s)	867, 2388
BcoDI	GTCTC	6 cut(s)	220, 232, 710, 2217, 2254, 2521
BcuI	ACTAGT	1 cut(s)	1616
BfmI	CTRYAG	1 cut(s)	2406
BfoI	RGCGCY	1 cut(s)	60
BfrI	CTTAAG	1 cut(s)	851
BfuAI	ACCTGC	3 cut(s)	1973, 2045, 2413
BfuI	GTATCC	1 cut(s)	388
BglI	GCCNNNNNGGC	1 cut(s)	91
BisI	GCNGC	8 cut(s)	92, 95, 98, 125, 436, 1452, 1776, 1814
BlnI	CCTAGG	2 cut(s)	1642, 2042
BlsI	GCNGC	8 cut(s)	93, 96, 99, 126, 437, 1453, 1777, 1815
Bme1390I	CCNGG	4 cut(s)	867, 1690, 2388, 2568
Bme18I	GGWCC	3 cut(s)	773, 1343, 2478
BmeT110I	CYCGRG	2 cut(s)	2265, 2424
BmgT120I	GGNCC	6 cut(s)	773, 1174, 1343, 1636, 2147, 2478
BmiI	GGNNCC	8 cut(s)	58, 190, 498, 775, 991, 1119, 2305, 2479
BmrFI	CCNGG	4 cut(s)	867, 1690, 2388, 2568
BmrI	ACTGGG	1 cut(s)	1062
BmsI	GCATC	7 cut(s)	379, 886, 1544, 1594, 1662, 2322, 2409
BmtI	GCTAGC	2 cut(s)	719, 2565
BmuI	ACTGGG	1 cut(s)	1062
BpiI	GAAGAC	3 cut(s)	63, 1602, 2236
BplI	GAGNNNNNCTC	4 cut(s)	1269, 1301, 1886, 1918
BpmI	CTGGAG	3 cut(s)	501, 579, 894
BpuEI	CTTGAG	2 cut(s)	236, 1603
BpuMI	CCSGG	2 cut(s)	867, 2388
Bsa29I	ATCGAT	2 cut(s)	173, 958
BsaAI	YACGTR	1 cut(s)	1030
BsaHI	GRCGYC	3 cut(s)	57, 153, 225
BsaI	GGTCTC	1 cut(s)	710
BsaWI	WCCGGW	1 cut(s)	185
BsaXI	ACNNNNNCTCC	4 cut(s)	212, 242, 474, 504
Bsc4I	CCNNNNNNNGG	3 cut(s)	872, 1223, 1531
Bse118I	RCCGGY	1 cut(s)	1633
Bse1I	ACTGG	8 cut(s)	562, 656, 877, 929, 1057, 1101, 1228, 1736
Bse3DI	GCAATG	1 cut(s)	2065
BseBI	CCWGG	2 cut(s)	1690, 2568
BseCI	ATCGAT	2 cut(s)	173, 958
BseGI	GGATG	8 cut(s)	269, 735, 1085, 1743, 1795, 1812, 2159, 2337
BseLI	CCNNNNNNNGG	3 cut(s)	872, 1223, 1531
BseMI	GCAATG	1 cut(s)	2065
BseMII	CTCAG	3 cut(s)	456, 606, 936
BseNI	ACTGG	8 cut(s)	562, 656, 877, 929, 1057, 1101, 1228, 1736
BseRI	GAGGAG	4 cut(s)	239, 576, 891, 2442
BseXI	GCAGC	7 cut(s)	106, 109, 111, 447, 1438, 1762, 1800
BseYI	CCCAGC	1 cut(s)	148
BsgI	GTGCAG	1 cut(s)	2295
Bsh1236I	CGCG	3 cut(s)	91, 180, 1707
BshFI	GGCC	9 cut(s)	313, 655, 1163, 1175, 1524, 1590, 1637, 2148, 2470
BshNI	GGYRCC	1 cut(s)	56
BshVI	ATCGAT	2 cut(s)	173, 958
BsiHKAI	GWGCWC	2 cut(s)	165, 1563
BsiHKCI	CYCGRG	2 cut(s)	2265, 2424
BsiSI	CCGG	4 cut(s)	186, 866, 1634, 2387
BslFI	GGGAC	2 cut(s)	759, 1069
BslI	CCNNNNNNNGG	3 cut(s)	872, 1223, 1531
BsmAI	GTCTC	6 cut(s)	220, 232, 710, 2217, 2254, 2521
BsmBI	CGTCTC	2 cut(s)	220, 232
BsmFI	GGGAC	2 cut(s)	759, 1069
BsmI	GAATGC	1 cut(s)	460
BsnI	GGCC	9 cut(s)	313, 655, 1163, 1175, 1524, 1590, 1637, 2148, 2470
Bso31I	GGTCTC	1 cut(s)	710
BsoBI	CYCGRG	2 cut(s)	2265, 2424
Bsp1286I	GDGCHC	2 cut(s)	165, 1563
Bsp19I	CCATGG	1 cut(s)	1217
BspACI	CCGC	9 cut(s)	91, 231, 392, 1134, 1682, 1707, 2238, 2295, 2339
BspANI	GGCC	9 cut(s)	313, 655, 1163, 1175, 1524, 1590, 1637, 2148, 2470
BspCNI	CTCAG	3 cut(s)	457, 605, 935
BspDI	ATCGAT	2 cut(s)	173, 958
BspFNI	CGCG	3 cut(s)	91, 180, 1707
BspHI	TCATGA	2 cut(s)	1542, 1957
BspLI	GGNNCC	8 cut(s)	58, 190, 498, 775, 991, 1119, 2305, 2479
BspMAI	CTGCAG	1 cut(s)	2410
BspMI	ACCTGC	3 cut(s)	1973, 2045, 2413
BspOI	GCTAGC	2 cut(s)	719, 2565
BspPI	GGATC	7 cut(s)	183, 196, 429, 984, 997, 1041, 2176
BspT107I	GGYRCC	1 cut(s)	56
BspTI	CTTAAG	1 cut(s)	851
BspTNI	GGTCTC	1 cut(s)	710
BsrBI	CCGCTC	2 cut(s)	1682, 2240
BsrDI	GCAATG	1 cut(s)	2065
BsrFI	RCCGGY	1 cut(s)	1633
BsrI	ACTGG	8 cut(s)	562, 656, 877, 929, 1057, 1101, 1228, 1736
BssAI	RCCGGY	1 cut(s)	1633
BssNI	GRCGYC	3 cut(s)	57, 153, 225
BssSI	CACGAG	1 cut(s)	1069
BssT1I	CCWWGG	6 cut(s)	195, 785, 1217, 1642, 1833, 2042
Bst2BI	CACGAG	1 cut(s)	1069
Bst2UI	CCWGG	2 cut(s)	1690, 2568
Bst4CI	ACNGT	4 cut(s)	501, 1797, 1851, 2211
BstACI	GRCGYC	3 cut(s)	57, 153, 225
BstAFI	CTTAAG	1 cut(s)	851
BstBAI	YACGTR	1 cut(s)	1030
BstDEI	CTNAG	4 cut(s)	465, 592, 628, 922
BstDSI	CCRYGG	2 cut(s)	105, 1217
BstF5I	GGATG	8 cut(s)	269, 735, 1085, 1743, 1795, 1812, 2159, 2337
BstFNI	CGCG	3 cut(s)	91, 180, 1707
BstH2I	RGCGCY	1 cut(s)	60
BstHHI	GCGC	3 cut(s)	59, 610, 2172
BstMAI	GTCTC	6 cut(s)	220, 232, 710, 2217, 2254, 2521
BstMWI	GCNNNNNNNGC	7 cut(s)	91, 97, 1442, 1451, 2119, 2281, 2577
BstNI	CCWGG	2 cut(s)	1690, 2568
BstNSI	RCATGY	5 cut(s)	614, 1733, 1974, 2398, 2516
BstSCI	CCNGG	4 cut(s)	865, 1688, 2386, 2566
BstSFI	CTRYAG	1 cut(s)	2406
BstUI	CGCG	3 cut(s)	91, 180, 1707
BstV1I	GCAGC	7 cut(s)	106, 109, 111, 447, 1438, 1762, 1800
BstV2I	GAAGAC	3 cut(s)	63, 1602, 2236
BstX2I	RGATCY	4 cut(s)	188, 421, 989, 1046
BstXI	CCANNNNNNTGG	1 cut(s)	202
BstYI	RGATCY	4 cut(s)	188, 421, 989, 1046
Bsu15I	ATCGAT	2 cut(s)	173, 958
BsuI	GTATCC	1 cut(s)	388
BsuRI	GGCC	9 cut(s)	313, 655, 1163, 1175, 1524, 1590, 1637, 2148, 2470
BsuTUI	ATCGAT	2 cut(s)	173, 958
BtgI	CCRYGG	2 cut(s)	105, 1217
BtgZI	GCGATG	3 cut(s)	66, 150, 1662
BtsCI	GGATG	8 cut(s)	269, 735, 1085, 1743, 1795, 1812, 2159, 2337
BtsI	GCAGTG	2 cut(s)	1326, 1482
BtsIMutI	CAGTG	6 cut(s)	555, 1050, 1326, 1482, 1743, 2177
BveI	ACCTGC	3 cut(s)	1973, 2045, 2413
CciI	TCATGA	2 cut(s)	1542, 1957
CfoI	GCGC	3 cut(s)	59, 610, 2172
Cfr10I	RCCGGY	1 cut(s)	1633
Cfr13I	GGNCC	6 cut(s)	773, 1174, 1343, 1636, 2147, 2478
ClaI	ATCGAT	2 cut(s)	173, 958
CseI	GACGC	4 cut(s)	142, 214, 662, 1542
Csp6I	GTAC	7 cut(s)	102, 130, 1199, 1240, 1700, 2063, 2402
CspCI	CAANNNNNGTGG	2 cut(s)	1815, 1850
CviQI	GTAC	7 cut(s)	102, 130, 1199, 1240, 1700, 2063, 2402
DdeI	CTNAG	4 cut(s)	465, 592, 628, 922
DinI	GGCGCC	1 cut(s)	58
DraIII	CACNNNGTG	1 cut(s)	2390
DrdI	GACNNNNNNGTC	2 cut(s)	206, 1552
DseDI	GACNNNNNNGTC	2 cut(s)	206, 1552
EciI	GGCGGA	2 cut(s)	220, 1149
Eco130I	CCWWGG	6 cut(s)	195, 785, 1217, 1642, 1833, 2042
Eco147I	AGGCCT	3 cut(s)	1524, 1590, 2470
Eco31I	GGTCTC	1 cut(s)	710
Eco32I	GATATC	2 cut(s)	1283, 1663
Eco47I	GGWCC	3 cut(s)	773, 1343, 2478
Eco57I	CTGAAG	3 cut(s)	365, 953, 2544
Eco88I	CYCGRG	2 cut(s)	2265, 2424
EcoRI	GAATTC	1 cut(s)	580
EcoRII	CCWGG	2 cut(s)	1688, 2566
EcoRV	GATATC	2 cut(s)	1283, 1663
EcoT14I	CCWWGG	6 cut(s)	195, 785, 1217, 1642, 1833, 2042
EgeI	GGCGCC	1 cut(s)	58
EheI	GGCGCC	1 cut(s)	58
ErhI	CCWWGG	6 cut(s)	195, 785, 1217, 1642, 1833, 2042
Esp3I	CGTCTC	2 cut(s)	220, 232
FalI	AAGNNNNNCTT	2 cut(s)	2517, 2549
FaqI	GGGAC	2 cut(s)	759, 1069
FauNDI	CATATG	1 cut(s)	1549
FbaI	TGATCA	1 cut(s)	1740
FblI	GTMKAC	1 cut(s)	333
Fnu4HI	GCNGC	8 cut(s)	92, 95, 98, 125, 436, 1452, 1776, 1814
FokI	GGATG	8 cut(s)	276, 742, 1072, 1730, 1802, 1819, 2146, 2344
Fsp4HI	GCNGC	8 cut(s)	92, 95, 98, 125, 436, 1452, 1776, 1814
FspAI	RTGCGCAY	1 cut(s)	609
FspI	TGCGCA	2 cut(s)	609, 2171
GlaI	GCGC	3 cut(s)	58, 609, 2171
GluI	GCNGC	8 cut(s)	92, 95, 98, 125, 436, 1452, 1776, 1814
GsaI	CCCAGC	1 cut(s)	152
GsuI	CTGGAG	3 cut(s)	501, 579, 894
HaeII	RGCGCY	1 cut(s)	60
HaeIII	GGCC	9 cut(s)	313, 655, 1163, 1175, 1524, 1590, 1637, 2148, 2470
HapII	CCGG	4 cut(s)	186, 866, 1634, 2387
HgaI	GACGC	4 cut(s)	142, 214, 662, 1542
HhaI	GCGC	3 cut(s)	59, 610, 2172
Hin1I	GRCGYC	3 cut(s)	57, 153, 225
Hin6I	GCGC	3 cut(s)	57, 608, 2170
HinP1I	GCGC	3 cut(s)	57, 608, 2170
HpaII	CCGG	4 cut(s)	186, 866, 1634, 2387
HphI	GGTGA	1 cut(s)	418
Hpy166II	GTNNAC	5 cut(s)	334, 746, 798, 1229, 1248
Hpy8I	GTNNAC	5 cut(s)	334, 746, 798, 1229, 1248
Hpy99I	CGWCG	5 cut(s)	91, 224, 319, 1558, 1633
HpyAV	CCTTC	8 cut(s)	839, 872, 1864, 1915, 2133, 2195, 2460, 2569
HpyCH4III	ACNGT	4 cut(s)	501, 1797, 1851, 2211
HpyCH4IV	ACGT	5 cut(s)	117, 508, 1029, 1082, 1930
HpyF10VI	GCNNNNNNNGC	7 cut(s)	91, 97, 1442, 1451, 2119, 2281, 2577
HpyF3I	CTNAG	4 cut(s)	465, 592, 628, 922
HpySE526I	ACGT	5 cut(s)	117, 508, 1029, 1082, 1930
Hsp92I	GRCGYC	3 cut(s)	57, 153, 225
HspAI	GCGC	3 cut(s)	57, 608, 2170
KasI	GGCGCC	1 cut(s)	56
KroI	GCCGGC	1 cut(s)	1633
KroNI	GCCGGC	1 cut(s)	1635
Ksp22I	TGATCA	1 cut(s)	1740
LmnI	GCTCC	4 cut(s)	252, 670, 1558, 2245
Lsp1109I	GCAGC	7 cut(s)	106, 109, 111, 447, 1438, 1762, 1800
LweI	GCATC	7 cut(s)	379, 886, 1544, 1594, 1662, 2322, 2409
MaeII	ACGT	5 cut(s)	117, 508, 1029, 1082, 1930
MaeIII	GTNAC	4 cut(s)	118, 535, 950, 1124
MbiI	CCGCTC	2 cut(s)	1682, 2240
MflI	RGATCY	4 cut(s)	188, 421, 989, 1046
MhlI	GDGCHC	2 cut(s)	165, 1563
MluCI	AATT	5 cut(s)	580, 912, 1041, 2137, 2362
Mly113I	GGCGCC	1 cut(s)	57
MlyI	GAGTC	3 cut(s)	851, 1051, 2336
MmeI	TCCRAC	3 cut(s)	243, 1498, 1536
MroNI	GCCGGC	1 cut(s)	1633
MroXI	GAANNNNTTC	1 cut(s)	350
MseI	TTAA	7 cut(s)	735, 852, 1062, 1095, 1496, 1508, 2277
MslI	CAYNNNNRTG	1 cut(s)	1752
MspCI	CTTAAG	1 cut(s)	851
MspI	CCGG	4 cut(s)	186, 866, 1634, 2387
MspR9I	CCNGG	4 cut(s)	867, 1690, 2388, 2568
Mva1269I	GAATGC	1 cut(s)	460
MvaI	CCWGG	2 cut(s)	1690, 2568
MvnI	CGCG	3 cut(s)	91, 180, 1707
MwoI	GCNNNNNNNGC	7 cut(s)	91, 97, 1442, 1451, 2119, 2281, 2577
NaeI	GCCGGC	1 cut(s)	1635
NarI	GGCGCC	1 cut(s)	57
NciI	CCSGG	2 cut(s)	867, 2388
NcoI	CCATGG	1 cut(s)	1217
NdeI	CATATG	1 cut(s)	1549
NgoMIV	GCCGGC	1 cut(s)	1633
NheI	GCTAGC	2 cut(s)	715, 2561
NlaIV	GGNNCC	8 cut(s)	58, 190, 498, 775, 991, 1119, 2305, 2479
NmeAIII	GCCGAG	2 cut(s)	144, 1701
NmuCI	GTSAC	2 cut(s)	118, 535
NsbI	TGCGCA	2 cut(s)	609, 2171
NspI	RCATGY	5 cut(s)	614, 1733, 1974, 2398, 2516
PaeI	GCATGC	3 cut(s)	1733, 1974, 2398
PagI	TCATGA	2 cut(s)	1542, 1957
PceI	AGGCCT	3 cut(s)	1524, 1590, 2470
PciI	ACATGT	1 cut(s)	2512
PctI	GAATGC	1 cut(s)	460
PdiI	GCCGGC	1 cut(s)	1635
PdmI	GAANNNNTTC	1 cut(s)	350
PfeI	GAWTC	7 cut(s)	43, 295, 321, 548, 1349, 1364, 2491
PflFI	GACNNNGTC	2 cut(s)	203, 224
PflMI	CCANNNNNTGG	1 cut(s)	1223
PfoI	TCCNGGA	1 cut(s)	865
PkrI	GCNGC	8 cut(s)	93, 96, 99, 126, 437, 1453, 1777, 1815
PleI	GAGTC	3 cut(s)	851, 1051, 2336
PluTI	GGCGCC	1 cut(s)	60
PpsI	GAGTC	3 cut(s)	851, 1051, 2336
Ppu21I	YACGTR	1 cut(s)	1030
PscI	ACATGT	1 cut(s)	2512
PshBI	ATTAAT	1 cut(s)	1095
Psp6I	CCWGG	2 cut(s)	1688, 2566
PspFI	CCCAGC	1 cut(s)	148
PspGI	CCWGG	2 cut(s)	1688, 2566
PspN4I	GGNNCC	8 cut(s)	58, 190, 498, 775, 991, 1119, 2305, 2479
PspPI	GGNCC	6 cut(s)	773, 1174, 1343, 1636, 2147, 2478
PstI	CTGCAG	1 cut(s)	2410
PsuI	RGATCY	4 cut(s)	188, 421, 989, 1046
PsyI	GACNNNGTC	2 cut(s)	203, 224
RsaI	GTAC	7 cut(s)	103, 131, 1200, 1241, 1701, 2064, 2403
RsaNI	GTAC	7 cut(s)	102, 130, 1199, 1240, 1700, 2063, 2402
RseI	CAYNNNNRTG	1 cut(s)	1752
SaqAI	TTAA	7 cut(s)	735, 852, 1062, 1095, 1496, 1508, 2277
SatI	GCNGC	8 cut(s)	92, 95, 98, 125, 436, 1452, 1776, 1814
Sau96I	GGNCC	6 cut(s)	773, 1174, 1343, 1636, 2147, 2478
SchI	GAGTC	3 cut(s)	851, 1051, 2336
ScrFI	CCNGG	4 cut(s)	867, 1690, 2388, 2568
SduI	GDGCHC	2 cut(s)	165, 1563
SfaNI	GCATC	7 cut(s)	379, 886, 1544, 1594, 1662, 2322, 2409
SfcI	CTRYAG	1 cut(s)	2406
SfoI	GGCGCC	1 cut(s)	58
SinI	GGWCC	3 cut(s)	773, 1343, 2478
SmiMI	CAYNNNNRTG	1 cut(s)	1752
SmlI	CTYRAG	3 cut(s)	251, 851, 1582
SmoI	CTYRAG	3 cut(s)	251, 851, 1582
SpeI	ACTAGT	1 cut(s)	1616
SphI	GCATGC	3 cut(s)	1733, 1974, 2398
Sse9I	AATT	5 cut(s)	580, 912, 1041, 2137, 2362
SseBI	AGGCCT	3 cut(s)	1524, 1590, 2470
SsiI	CCGC	9 cut(s)	91, 231, 392, 1134, 1682, 1707, 2238, 2295, 2339
SspDI	GGCGCC	1 cut(s)	56
StuI	AGGCCT	3 cut(s)	1524, 1590, 2470
StyD4I	CCNGG	4 cut(s)	865, 1688, 2386, 2566
StyI	CCWWGG	6 cut(s)	195, 785, 1217, 1642, 1833, 2042
TaaI	ACNGT	4 cut(s)	501, 1797, 1851, 2211
TaiI	ACGT	5 cut(s)	120, 511, 1032, 1085, 1933
TaqI	TCGA	6 cut(s)	46, 173, 618, 958, 1000, 1204
TaqII	GACCGA	2 cut(s)	761, 1614
TasI	AATT	5 cut(s)	580, 912, 1041, 2137, 2362
TauI	GCSGC	1 cut(s)	94
TfiI	GAWTC	7 cut(s)	43, 295, 321, 548, 1349, 1364, 2491
Tru1I	TTAA	7 cut(s)	735, 852, 1062, 1095, 1496, 1508, 2277
Tru9I	TTAA	7 cut(s)	735, 852, 1062, 1095, 1496, 1508, 2277
TscAI	CASTG	6 cut(s)	562, 1057, 1326, 1489, 1743, 2184
TseFI	GTSAC	2 cut(s)	118, 535
TseI	GCWGC	7 cut(s)	94, 97, 124, 435, 1451, 1775, 1813
Tsp45I	GTSAC	2 cut(s)	118, 535
TspGWI	ACGGA	2 cut(s)	122, 740
TspRI	CASTG	6 cut(s)	562, 1057, 1326, 1489, 1743, 2184
Tth111I	GACNNNGTC	2 cut(s)	203, 224
Van91I	CCANNNNNTGG	1 cut(s)	1223
Vha464I	CTTAAG	1 cut(s)	851
VpaK11BI	GGWCC	3 cut(s)	773, 1343, 2478
VspI	ATTAAT	1 cut(s)	1095
XapI	RAATTY	2 cut(s)	580, 912
XceI	RCATGY	5 cut(s)	614, 1733, 1974, 2398, 2516
XcmI	CCANNNNNNNNNTGG	2 cut(s)	199, 1754
XmaJI	CCTAGG	2 cut(s)	1642, 2042
XmiI	GTMKAC	1 cut(s)	333
XmnI	GAANNNNTTC	1 cut(s)	350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.