Rmu_sc0006153.1_g000021

dihydrolipoyllysine-residue acetyltransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006153.1
OG0011512
Physical Location & Seq
Reverse (-)
77834 .. 78176
343 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006153.1_g000021.1.cds

Sequence Viewer

Length: 252 bp
atggagtctccggcatcatcttccgaagctccggcggtgagttcttgccggaggaagaagaatttcggaagcggcagctttgtatcggacttaaggtctcacattcatgagtttattcatgcttccgtggatgaacacagaatttgcttggtggatacctttaagaagatgaagtcaaaattttacagagaaaagagcgttgctggcccaaatgaaggagaagcttcgctgcctctacaaaacaaggactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000502 GO:0003674 GO:0003824 GO:0004742 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005839 GO:0005840 GO:0006082 GO:0006084 GO:0006085 GO:0006086 GO:0006090 GO:0006139 GO:0006163 GO:0006164 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009941 GO:0009987 GO:0016020 GO:0016407 GO:0016417 GO:0016418 GO:0016740 GO:0016746 GO:0016747 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019752 GO:0019773 GO:0022626 GO:0030523 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032787 GO:0032991 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0035383 GO:0035384 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0046390 GO:0046483 GO:0050896 GO:0051186 GO:0051188 GO:0051704 GO:0051707 GO:0055086 GO:0071616 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:0098542 GO:0140096 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1905368 GO:1905369 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200
Pfam Domains
Protein Families
2-oxoacid_dh Biotin_lipoyl E3_binding

Protein Analysis

83

Amino Acids

9.23

Weight (kDa)

8.66

Isoelectric Point (pI)

68.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 35, 72
AcsI RAATTY 3 cut(s) 61, 141, 179
AfiI CCNNNNNNNGG 1 cut(s) 215
AflII CTTAAG 1 cut(s) 91
AhdI GACNNNNNGTC 1 cut(s) 94
AluBI AGCT 3 cut(s) 29, 78, 224
AluI AGCT 3 cut(s) 29, 78, 224
Alw26I GTCTC 2 cut(s) 12, 102
AoxI GGCC 1 cut(s) 205
ApeKI GCWGC 2 cut(s) 75, 229
ApoI RAATTY 3 cut(s) 61, 141, 179
Asp700I GAANNNNTTC 1 cut(s) 62
AspS9I GGNCC 1 cut(s) 206
AsuHPI GGTGA 1 cut(s) 49
BbvI GCAGC 2 cut(s) 87, 216
BciVI GTATCC 1 cut(s) 148
BcoDI GTCTC 2 cut(s) 12, 102
BfrI CTTAAG 1 cut(s) 91
BfuI GTATCC 1 cut(s) 148
BisI GCNGC 3 cut(s) 73, 76, 230
BlsI GCNGC 3 cut(s) 74, 77, 231
BmeRI GACNNNNNGTC 1 cut(s) 94
BmgT120I GGNCC 1 cut(s) 206
BmsI GCATC 1 cut(s) 23
BsaI GGTCTC 1 cut(s) 102
BsaJI CCNNGG 1 cut(s) 126
Bsc4I CCNNNNNNNGG 1 cut(s) 215
BseDI CCNNGG 1 cut(s) 126
BseGI GGATG 1 cut(s) 136
BseLI CCNNNNNNNGG 1 cut(s) 215
BseXI GCAGC 2 cut(s) 87, 216
BshFI GGCC 1 cut(s) 207
BsiSI CCGG 3 cut(s) 11, 32, 49
BslI CCNNNNNNNGG 1 cut(s) 215
BsmAI GTCTC 2 cut(s) 12, 102
BsnI GGCC 1 cut(s) 207
Bso31I GGTCTC 1 cut(s) 102
BspACI CCGC 2 cut(s) 35, 72
BspANI GGCC 1 cut(s) 207
BspHI TCATGA 1 cut(s) 106
BspTI CTTAAG 1 cut(s) 91
BspTNI GGTCTC 1 cut(s) 102
BssECI CCNNGG 1 cut(s) 126
BstAFI CTTAAG 1 cut(s) 91
BstC8I GCNNGC 1 cut(s) 205
BstDSI CCRYGG 1 cut(s) 126
BstF5I GGATG 1 cut(s) 136
BstMAI GTCTC 2 cut(s) 12, 102
BstMWI GCNNNNNNNGC 1 cut(s) 204
BstV1I GCAGC 2 cut(s) 87, 216
BsuI GTATCC 1 cut(s) 148
BsuRI GGCC 1 cut(s) 207
BtgI CCRYGG 1 cut(s) 126
BtsCI GGATG 1 cut(s) 136
Cac8I GCNNGC 1 cut(s) 205
CciI TCATGA 1 cut(s) 106
Cfr13I GGNCC 1 cut(s) 206
CviAII CATG 2 cut(s) 107, 119
CviJI RGCY 4 cut(s) 29, 78, 207, 224
CviKI_1 RGCY 4 cut(s) 29, 78, 207, 224
DriI GACNNNNNGTC 1 cut(s) 94
Eam1105I GACNNNNNGTC 1 cut(s) 94
Eco31I GGTCTC 1 cut(s) 102
FaeI CATG 2 cut(s) 110, 122
FaiI YATR 2 cut(s) 108, 120
FatI CATG 2 cut(s) 106, 118
Fnu4HI GCNGC 3 cut(s) 73, 76, 230
FokI GGATG 1 cut(s) 143
Fsp4HI GCNGC 3 cut(s) 73, 76, 230
GluI GCNGC 3 cut(s) 73, 76, 230
HaeIII GGCC 1 cut(s) 207
HapII CCGG 3 cut(s) 11, 32, 49
Hin1II CATG 2 cut(s) 110, 122
HindIII AAGCTT 1 cut(s) 222
HinfI GANTC 1 cut(s) 5
HpaII CCGG 3 cut(s) 11, 32, 49
HphI GGTGA 1 cut(s) 49
Hpy188I TCNGA 3 cut(s) 25, 68, 88
Hpy188III TCNNGA 1 cut(s) 107
HpyAV CCTTC 1 cut(s) 209
HpyF10VI GCNNNNNNNGC 1 cut(s) 204
Hsp92II CATG 2 cut(s) 110, 122
LmnI GCTCC 1 cut(s) 34
LpnPI CCDG 4 cut(s) 24, 45, 62, 189
Lsp1109I GCAGC 2 cut(s) 87, 216
LweI GCATC 1 cut(s) 23
MboII GAAGA 4 cut(s) 12, 67, 70, 178
MluCI AATT 3 cut(s) 61, 141, 179
MlyI GAGTC 1 cut(s) 14
MnlI CCTC 2 cut(s) 45, 243
MroXI GAANNNNTTC 1 cut(s) 62
MseI TTAA 2 cut(s) 92, 162
MslI CAYNNNNRTG 1 cut(s) 105
MspCI CTTAAG 1 cut(s) 91
MspI CCGG 3 cut(s) 11, 32, 49
MwoI GCNNNNNNNGC 1 cut(s) 204
NlaIII CATG 2 cut(s) 110, 122
PagI TCATGA 1 cut(s) 106
PdmI GAANNNNTTC 1 cut(s) 62
PkrI GCNGC 3 cut(s) 74, 77, 231
PleI GAGTC 1 cut(s) 13
PpsI GAGTC 1 cut(s) 13
PspPI GGNCC 1 cut(s) 206
RseI CAYNNNNRTG 1 cut(s) 105
SaqAI TTAA 2 cut(s) 92, 162
SatI GCNGC 3 cut(s) 73, 76, 230
Sau96I GGNCC 1 cut(s) 206
SchI GAGTC 1 cut(s) 14
SetI ASST 5 cut(s) 31, 80, 98, 161, 226
SfaNI GCATC 1 cut(s) 23
SgeI CNNG 9 cut(s) 23, 44, 57, 61, 119, 131, 139, 160, 216
SmiMI CAYNNNNRTG 1 cut(s) 105
SmlI CTYRAG 1 cut(s) 91
SmoI CTYRAG 1 cut(s) 91
Sse9I AATT 3 cut(s) 61, 141, 179
SsiI CCGC 2 cut(s) 35, 72
TasI AATT 3 cut(s) 61, 141, 179
TauI GCSGC 1 cut(s) 75
Tru1I TTAA 2 cut(s) 92, 162
Tru9I TTAA 2 cut(s) 92, 162
TseI GCWGC 2 cut(s) 75, 229
TspDTI ATGAA 5 cut(s) 95, 107, 147, 185, 228
TspGWI ACGGA 1 cut(s) 115
Vha464I CTTAAG 1 cut(s) 91
XapI RAATTY 3 cut(s) 61, 141, 179
XmnI GAANNNNTTC 1 cut(s) 62
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.