Rmu_sc0006159.1_g000009
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006159.1
Physical Location & Seq
Reverse (-)
31925 .. 32257
333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006159.1_g000009.1.cds

Sequence Viewer

Length: 333 bp
atggtgctgcagttcaagcttcaagctgcggtcttgagtgggaatgaaaatgagaagcttcaaggtttcgctctcttggatgtcatccctctatcacttggagtggagactaatgattttggtgacccacatgttatgtcggttgtgcttccaagaaacaccagaatccccgccaaaaagaacggaatcattttggaaacttccattgacaaacaggtttcatttccattctcaatttatgagggcgggagttcaacaaccttagataataactttttgggtaaattttgtatggatggcattcctccagtagtccagtacctgcaggtgtag
Functional Annotation

Protein Analysis

110

Amino Acids

12.03

Weight (kDa)

4.9

Isoelectric Point (pI)

29.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0025477)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 316
Acc36I ACCTGC 1 cut(s) 316
AciI CCGC 3 cut(s) 29, 171, 246
AcsI RAATTY 1 cut(s) 284
AfaI GTAC 1 cut(s) 320
AflIII ACRYGT 1 cut(s) 130
AgsI TTSAA 4 cut(s) 16, 23, 62, 255
AluBI AGCT 3 cut(s) 19, 26, 58
AluI AGCT 3 cut(s) 19, 26, 58
Alw26I GTCTC 1 cut(s) 101
AlwNI CAGNNNCTG 1 cut(s) 322
ApeKI GCWGC 2 cut(s) 7, 26
ApoI RAATTY 1 cut(s) 284
AsuHPI GGTGA 1 cut(s) 134
BbvI GCAGC 1 cut(s) 13
BccI CCATC 1 cut(s) 290
BcoDI GTCTC 1 cut(s) 101
BfmI CTRYAG 2 cut(s) 8, 323
BfuAI ACCTGC 1 cut(s) 316
BisI GCNGC 2 cut(s) 8, 27
BlsI GCNGC 2 cut(s) 9, 28
BpmI CTGGAG 1 cut(s) 291
BpuEI CTTGAG 1 cut(s) 55
Bse1I ACTGG 2 cut(s) 308, 316
BseGI GGATG 3 cut(s) 84, 85, 301
BseNI ACTGG 2 cut(s) 308, 316
BseXI GCAGC 1 cut(s) 13
BsmAI GTCTC 1 cut(s) 101
BsmI GAATGC 1 cut(s) 300
BspACI CCGC 3 cut(s) 29, 171, 246
BspMAI CTGCAG 2 cut(s) 12, 327
BspMI ACCTGC 1 cut(s) 316
BsrI ACTGG 2 cut(s) 308, 316
BstDEI CTNAG 1 cut(s) 262
BstEII GGTNACC 1 cut(s) 122
BstF5I GGATG 3 cut(s) 84, 85, 301
BstMAI GTCTC 1 cut(s) 101
BstMWI GCNNNNNNNGC 1 cut(s) 16
BstNSI RCATGY 1 cut(s) 134
BstPI GGTNACC 1 cut(s) 122
BstSFI CTRYAG 2 cut(s) 8, 323
BstV1I GCAGC 1 cut(s) 13
BtsCI GGATG 3 cut(s) 84, 85, 301
BveI ACCTGC 1 cut(s) 316
CaiI CAGNNNCTG 1 cut(s) 322
Csp6I GTAC 1 cut(s) 319
CviAII CATG 1 cut(s) 131
CviJI RGCY 3 cut(s) 19, 26, 58
CviKI_1 RGCY 3 cut(s) 19, 26, 58
CviQI GTAC 1 cut(s) 319
DdeI CTNAG 1 cut(s) 262
Eco91I GGTNACC 1 cut(s) 122
EcoO65I GGTNACC 1 cut(s) 122
FaeI CATG 1 cut(s) 134
FaiI YATR 4 cut(s) 132, 137, 240, 293
FatI CATG 1 cut(s) 130
FauI CCCGC 2 cut(s) 178, 239
Fnu4HI GCNGC 2 cut(s) 8, 27
FokI GGATG 3 cut(s) 71, 92, 308
Fsp4HI GCNGC 2 cut(s) 8, 27
GluI GCNGC 2 cut(s) 8, 27
GsuI CTGGAG 1 cut(s) 291
Hin1II CATG 1 cut(s) 134
HindIII AAGCTT 2 cut(s) 17, 56
HinfI GANTC 2 cut(s) 165, 186
HphI GGTGA 1 cut(s) 134
Hpy188III TCNNGA 1 cut(s) 34
HpyCH4V TGCA 2 cut(s) 10, 325
HpyF10VI GCNNNNNNNGC 1 cut(s) 16
HpyF3I CTNAG 1 cut(s) 262
Hsp92II CATG 1 cut(s) 134
LpnPI CCDG 5 cut(s) 175, 200, 311, 321, 329
Lsp1109I GCAGC 1 cut(s) 13
MaeIII GTNAC 1 cut(s) 122
MluCI AATT 2 cut(s) 234, 284
MnlI CCTC 3 cut(s) 99, 235, 315
Mva1269I GAATGC 1 cut(s) 300
MwoI GCNNNNNNNGC 1 cut(s) 16
NlaIII CATG 1 cut(s) 134
NmuCI GTSAC 1 cut(s) 122
NspI RCATGY 1 cut(s) 134
PaqCI CACCTGC 1 cut(s) 316
PciI ACATGT 1 cut(s) 130
PctI GAATGC 1 cut(s) 300
PfeI GAWTC 2 cut(s) 165, 186
PkrI GCNGC 2 cut(s) 9, 28
PscI ACATGT 1 cut(s) 130
PspEI GGTNACC 1 cut(s) 122
PstI CTGCAG 2 cut(s) 12, 327
PstNI CAGNNNCTG 1 cut(s) 322
RsaI GTAC 1 cut(s) 320
RsaNI GTAC 1 cut(s) 319
SatI GCNGC 2 cut(s) 8, 27
SbfI CCTGCAGG 1 cut(s) 327
SdaI CCTGCAGG 1 cut(s) 327
SetI ASST 8 cut(s) 21, 28, 60, 67, 219, 263, 324, 330
SfcI CTRYAG 2 cut(s) 8, 323
SmlI CTYRAG 1 cut(s) 34
SmoI CTYRAG 1 cut(s) 34
Sse8387I CCTGCAGG 1 cut(s) 327
Sse9I AATT 2 cut(s) 234, 284
SsiI CCGC 3 cut(s) 29, 171, 246
TasI AATT 2 cut(s) 234, 284
TfiI GAWTC 2 cut(s) 165, 186
TseFI GTSAC 1 cut(s) 122
TseI GCWGC 2 cut(s) 7, 26
Tsp45I GTSAC 1 cut(s) 122
TspDTI ATGAA 2 cut(s) 60, 210
TspGWI ACGGA 1 cut(s) 198
XapI RAATTY 1 cut(s) 284
XceI RCATGY 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.