Rmu_sc0006170.1_g000005

Subtilisin-like serine endopeptidase family protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006170.1
Physical Location & Seq
Forward (+)
29169 .. 29444
276 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006170.1_g000005.1.cds

Sequence Viewer

Length: 276 bp
atggattacaattacccttcactagctactgttgtttcatcaaagcaagcatttactattaaatttcacagaacagttaagaacgttggccttgcaaactccacctacaaggccagaattttcacaaactccactcgagtagacatcaaggttctgcctgaagtactttctttcaagtctttgaatgaggagaagcctcttgatgtgaccgttgttggaggaggattgtcagatggcgcacaactggcatgtgtcagcactgctggtttggtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

91

Amino Acids

9.78

Weight (kDa)

9.21

Isoelectric Point (pI)

19.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025605)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0006170.1_g000005
rosa_roxburghii Rroxscaffold_7G00210270
rosa_samantha Rh6BG066000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 141
AclI AACGTT 1 cut(s) 84
AcsI RAATTY 2 cut(s) 62, 117
AcuI CTGAAG 1 cut(s) 180
AfaI GTAC 1 cut(s) 165
AgsI TTSAA 2 cut(s) 175, 184
AluBI AGCT 1 cut(s) 26
AluI AGCT 1 cut(s) 26
Ama87I CYCGRG 1 cut(s) 135
AoxI GGCC 2 cut(s) 88, 111
ApoI RAATTY 2 cut(s) 62, 117
AspLEI GCGC 1 cut(s) 239
AvaI CYCGRG 1 cut(s) 135
BccI CCATC 1 cut(s) 227
BfaI CTAG 1 cut(s) 23
BmcAI AGTACT 1 cut(s) 165
BmeT110I CYCGRG 1 cut(s) 135
Bse1I ACTGG 1 cut(s) 249
BseNI ACTGG 1 cut(s) 249
BseRI GAGGAG 2 cut(s) 203, 234
BshFI GGCC 2 cut(s) 90, 113
BsiHKCI CYCGRG 1 cut(s) 135
BsnI GGCC 2 cut(s) 90, 113
BsoBI CYCGRG 1 cut(s) 135
BspANI GGCC 2 cut(s) 90, 113
BsrI ACTGG 1 cut(s) 249
Bst4CI ACNGT 3 cut(s) 31, 76, 211
BstC8I GCNNGC 1 cut(s) 48
BstHHI GCGC 1 cut(s) 239
BstMWI GCNNNNNNNGC 1 cut(s) 245
BstNSI RCATGY 1 cut(s) 252
BsuRI GGCC 2 cut(s) 90, 113
BtsI GCAGTG 1 cut(s) 258
BtsIMutI CAGTG 1 cut(s) 258
Cac8I GCNNGC 1 cut(s) 48
CfoI GCGC 1 cut(s) 239
Csp6I GTAC 1 cut(s) 164
CviAII CATG 1 cut(s) 249
CviJI RGCY 4 cut(s) 26, 90, 113, 196
CviKI_1 RGCY 4 cut(s) 26, 90, 113, 196
CviQI GTAC 1 cut(s) 164
Eco57I CTGAAG 1 cut(s) 180
Eco88I CYCGRG 1 cut(s) 135
FaeI CATG 1 cut(s) 252
FaiI YATR 1 cut(s) 250
FatI CATG 1 cut(s) 248
FblI GTMKAC 1 cut(s) 141
FspBI CTAG 1 cut(s) 23
GlaI GCGC 1 cut(s) 238
HaeIII GGCC 2 cut(s) 90, 113
HhaI GCGC 1 cut(s) 239
Hin1II CATG 1 cut(s) 252
Hin6I GCGC 1 cut(s) 237
HinP1I GCGC 1 cut(s) 237
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 2 cut(s) 232, 275
Hpy188III TCNNGA 1 cut(s) 200
Hpy8I GTNNAC 1 cut(s) 142
HpyAV CCTTC 1 cut(s) 27
HpyCH4III ACNGT 3 cut(s) 31, 76, 211
HpyCH4IV ACGT 1 cut(s) 84
HpyCH4V TGCA 1 cut(s) 95
HpyF10VI GCNNNNNNNGC 1 cut(s) 245
HpySE526I ACGT 1 cut(s) 84
Hsp92II CATG 1 cut(s) 252
HspAI GCGC 1 cut(s) 237
LpnPI CCDG 4 cut(s) 127, 171, 230, 249
MaeI CTAG 1 cut(s) 23
MaeII ACGT 1 cut(s) 84
MaeIII GTNAC 1 cut(s) 205
MluCI AATT 3 cut(s) 10, 62, 117
MmeI TCCRAC 1 cut(s) 196
MnlI CCTC 4 cut(s) 181, 207, 212, 215
MseI TTAA 2 cut(s) 60, 78
MwoI GCNNNNNNNGC 1 cut(s) 245
NlaIII CATG 1 cut(s) 252
NmuCI GTSAC 1 cut(s) 205
NspI RCATGY 1 cut(s) 252
PaeR7I CTCGAG 1 cut(s) 135
Psp1406I AACGTT 1 cut(s) 84
PspXI VCTCGAGB 1 cut(s) 135
RsaI GTAC 1 cut(s) 165
RsaNI GTAC 1 cut(s) 164
SaqAI TTAA 2 cut(s) 60, 78
ScaI AGTACT 1 cut(s) 165
SetI ASST 4 cut(s) 28, 87, 107, 153
Sfr274I CTCGAG 1 cut(s) 135
SlaI CTCGAG 1 cut(s) 135
SmlI CTYRAG 1 cut(s) 135
SmoI CTYRAG 1 cut(s) 135
Sse9I AATT 3 cut(s) 10, 62, 117
SspMI CTAG 1 cut(s) 23
TaaI ACNGT 3 cut(s) 31, 76, 211
TaiI ACGT 1 cut(s) 87
TaqI TCGA 1 cut(s) 136
TasI AATT 3 cut(s) 10, 62, 117
TatI WGTACW 1 cut(s) 163
Tru1I TTAA 2 cut(s) 60, 78
Tru9I TTAA 2 cut(s) 60, 78
TscAI CASTG 1 cut(s) 265
TseFI GTSAC 1 cut(s) 205
Tsp45I GTSAC 1 cut(s) 205
TspDTI ATGAA 1 cut(s) 27
TspRI CASTG 1 cut(s) 265
XapI RAATTY 2 cut(s) 62, 117
XceI RCATGY 1 cut(s) 252
XhoI CTCGAG 1 cut(s) 135
XmiI GTMKAC 1 cut(s) 141
XspI CTAG 1 cut(s) 23
ZrmI AGTACT 1 cut(s) 165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.