Rmu_sc0006266.1_g000025

Replication factor C subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006266.1
OG0015060
Physical Location & Seq
Forward (+)
77449 .. 81538
4090 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1245 bp
atggggggatcgcgaaacggtgcgttttggggagatcgaataggcggaggttttgtggcggtcacgaaatggatgattgcgagggggcccttccgcataaaccattttccctccaaatcgaagcgggagcggcaaagagggcccgttcgcgagggtttcgtcacttccagaatcacagtccctctgttcctttccagccttgcgatctcgaattttgctgatacccagcagcaaacgacatcagcaatgtcgtcgtcttcttcgtcttccgcgtcggcctacgacatgccatgggtggagaagtacaggccgaacaaggtcggcgacatcgtcggcaacgaagacgccgtgtcgaggctccaggtcatcgcccgcgacggcaacatgcccaatctcatcttagccggtcctcctggaactggtaagaccactagtatacttgctcttgcacatgagcttttgggaccaaattatagggagggtgttttagagctgaatgcatctgatgacaggggaatagatgtggtgaggaacaagattaaaatgtttgctcaaaagaaagtaacacttcctcctgggcgccataaaattgtcatcttggatgaagctgacagcatgacatctggagcgcaacaagctttgaggcggacaatggaaatatattcaaattccacgcggttcgctcttgcatgcaatacttcctccaaaatcattgagcctattcagagtagatgtgccctagtccgattttctagattatctgatcaggagatacttggtcgtctaatggttgtggtccaagctgaaaaggttccctatgttccagaaggtctggaagccatcatttttactgctgatggtgatatgaggcaggcattgaataacttgcaagctacaaacagtggattccggtttgtcaaccaagaaaatgttttcaaggtctgtgaccagcctcatccattgcatgtaaagaatatgattcgtaacatacttgaagggaaatttgacgacgcttgttcgggtctcaagcagctctatgatttgggctattcacccactgacataatcacaacttttttccgtatcattaaaaattatgatatggctgagtatttgaaactggaattcatgaaggaaactgggtttgctcacatgagaatctgcgatggagttggctcatatcttcagctgtgtggtcttctggctaagctttccctagttcgtgacacagccaaagcgacataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000723 GO:0000731 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005657 GO:0005663 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006283 GO:0006289 GO:0006296 GO:0006297 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010604 GO:0016043 GO:0017076 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019725 GO:0019985 GO:0022402 GO:0030554 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031390 GO:0031974 GO:0031981 GO:0032200 GO:0032201 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0033260 GO:0033554 GO:0033683 GO:0034641 GO:0034645 GO:0034654 GO:0035639 GO:0036094 GO:0042276 GO:0042592 GO:0042769 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0044786 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051276 GO:0051338 GO:0051347 GO:0051606 GO:0051716 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070987 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0090304 GO:0090305 GO:0090329 GO:0097159 GO:0097367 GO:1900262 GO:1900264 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:2000112 GO:2000278 GO:2000573
KEGG Pathways
Metabolic & Signaling
ko03030 ko03420 ko03430 map03030 map03420 map03430
Pfam Domains
Protein Families
AAA Rep_fac_C

Protein Analysis

414

Amino Acids

45.83

Weight (kDa)

9.27

Isoelectric Point (pI)

40.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_14 PF13173 131 - 232 4.1e-06 AAA domain
AAA PF00004 132 - 249 2e-13 ATPase family associated with various cellular activities (AAA)
DNA_pol3_delta2 PF13177 172 - 253 3.3e-08 DNA polymerase III, delta subunit
Rep_fac_C PF08542 318 - 403 1.4e-24 Replication factor C C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015060)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G63160
fragaria_vesca FvH4_5g01730 FvH4_5g01730
malus_domestica MD04G1065200.v1.1
prunus_persica Prupe.8G039600_v2.0.a1
pyrus_communis pycom04g05880
rosa_chinensis RchiOBHm_Chr7g0198991
rosa_laevigata RLG00000003826
rosa_multiflora Rmu_sc0006266.1_g000025 Rmu_sc0007328.1_g000009
rosa_roxburghii Rroxscaffold_3G00257230
rosa_rugosa Rorug07G0052000
rosa_samantha Rh7AG175000 Rh7BG178200 Rh7DG177600
rosa_wichuraiana Rw7G015350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 579
AccBSI CCGCTC 1 cut(s) 130
AccI GTMKAC 1 cut(s) 436
AccII CGCG 5 cut(s) 13, 150, 272, 375, 676
AciI CCGC 9 cut(s) 45, 59, 94, 124, 130, 270, 373, 646, 676
AclWI GGATC 1 cut(s) 16
AcsI RAATTY 4 cut(s) 211, 667, 1001, 1124
AcuI CTGAAG 1 cut(s) 1169
AcyI GRCGYC 2 cut(s) 345, 580
AfaI GTAC 1 cut(s) 305
AfiI CCNNNNNNNGG 2 cut(s) 354, 419
AgsI TTSAA 5 cut(s) 666, 880, 937, 995, 1117
AhdI GACNNNNNGTC 1 cut(s) 349
AhlI ACTAGT 1 cut(s) 431
AjnI CCWGG 3 cut(s) 360, 412, 574
AluBI AGCT 9 cut(s) 457, 493, 608, 638, 803, 893, 1033, 1189, 1210
AluI AGCT 9 cut(s) 457, 493, 608, 638, 803, 893, 1033, 1189, 1210
Alw26I GTCTC 1 cut(s) 1028
AlwI GGATC 1 cut(s) 16
AoxI GGCC 4 cut(s) 86, 140, 276, 308
ApaI GGGCCC 2 cut(s) 90, 144
ApeKI GCWGC 2 cut(s) 229, 1030
ApoI RAATTY 4 cut(s) 211, 667, 1001, 1124
Asp700I GAANNNNTTC 1 cut(s) 810
AspLEI GCGC 2 cut(s) 582, 631
AspS9I GGNCC 7 cut(s) 86, 87, 140, 141, 407, 464, 796
AsuHPI GGTGA 3 cut(s) 538, 872, 1044
AvaII GGWCC 3 cut(s) 407, 464, 796
BaeGI GKGCMC 3 cut(s) 90, 144, 739
BanI GGYRCC 1 cut(s) 579
BanII GRGCYC 2 cut(s) 90, 144
BbsI GAAGAC 4 cut(s) 249, 258, 348, 1190
BbvI GCAGC 2 cut(s) 241, 1042
BccI CCATC 3 cut(s) 848, 851, 1160
BceAI ACGGC 2 cut(s) 332, 394
BcgI CGANNNNNNTGC 2 cut(s) 234, 268
BciT130I CCWGG 3 cut(s) 362, 414, 576
BclI TGATCA 1 cut(s) 763
BcoDI GTCTC 1 cut(s) 1028
BcuI ACTAGT 1 cut(s) 431
BfaI CTAG 4 cut(s) 432, 740, 753, 1217
BfoI RGCGCY 1 cut(s) 583
BisI GCNGC 3 cut(s) 131, 230, 1031
BlpI GCTNAGC 1 cut(s) 1206
BlsI GCNGC 3 cut(s) 132, 231, 1032
Bme1390I CCNGG 3 cut(s) 362, 414, 576
Bme18I GGWCC 3 cut(s) 407, 464, 796
BmeRI GACNNNNNGTC 1 cut(s) 349
BmgT120I GGNCC 7 cut(s) 86, 87, 140, 141, 407, 464, 796
BmiI GGNNCC 7 cut(s) 87, 88, 142, 359, 465, 581, 813
BmrFI CCNGG 3 cut(s) 362, 414, 576
BmrI ACTGGG 1 cut(s) 1149
BmsI GCATC 1 cut(s) 509
BmuI ACTGGG 1 cut(s) 1149
BpiI GAAGAC 4 cut(s) 249, 258, 348, 1190
BpmI CTGGAG 2 cut(s) 344, 645
Bpu1102I GCTNAGC 1 cut(s) 1206
BpuEI CTTGAG 1 cut(s) 1010
BsaHI GRCGYC 2 cut(s) 345, 580
BsaI GGTCTC 1 cut(s) 1028
BsaJI CCNNGG 2 cut(s) 290, 575
BsaWI WCCGGW 1 cut(s) 909
BsaXI ACNNNNNCTCC 4 cut(s) 39, 69, 556, 586
Bsc4I CCNNNNNNNGG 2 cut(s) 354, 419
Bse118I RCCGGY 1 cut(s) 404
Bse1I ACTGG 3 cut(s) 424, 1125, 1144
Bse3DI GCAATG 2 cut(s) 252, 959
BseBI CCWGG 3 cut(s) 362, 414, 576
BseDI CCNNGG 2 cut(s) 290, 575
BseGI GGATG 3 cut(s) 78, 607, 955
BseLI CCNNNNNNNGG 2 cut(s) 354, 419
BseMI GCAATG 2 cut(s) 252, 959
BseMII CTCAG 1 cut(s) 1098
BseNI ACTGG 3 cut(s) 424, 1125, 1144
BseSI GKGCMC 3 cut(s) 90, 144, 739
BseXI GCAGC 2 cut(s) 241, 1042
BseYI CCCAGC 1 cut(s) 225
Bsh1236I CGCG 5 cut(s) 13, 150, 272, 375, 676
BshFI GGCC 4 cut(s) 88, 142, 278, 310
BshNI GGYRCC 1 cut(s) 579
BsiSI CCGG 2 cut(s) 405, 910
BslFI GGGAC 2 cut(s) 164, 477
BslI CCNNNNNNNGG 2 cut(s) 354, 419
BsmAI GTCTC 1 cut(s) 1028
BsmFI GGGAC 2 cut(s) 164, 477
BsmI GAATGC 1 cut(s) 502
BsnI GGCC 4 cut(s) 88, 142, 278, 310
Bso31I GGTCTC 1 cut(s) 1028
Bsp120I GGGCCC 2 cut(s) 86, 140
Bsp1286I GDGCHC 3 cut(s) 90, 144, 739
Bsp143I GATC 4 cut(s) 8, 34, 204, 763
Bsp1720I GCTNAGC 1 cut(s) 1206
Bsp19I CCATGG 1 cut(s) 290
Bsp68I TCGCGA 2 cut(s) 13, 150
BspACI CCGC 9 cut(s) 45, 59, 94, 124, 130, 270, 373, 646, 676
BspANI GGCC 4 cut(s) 88, 142, 278, 310
BspCNI CTCAG 1 cut(s) 1099
BspFNI CGCG 5 cut(s) 13, 150, 272, 375, 676
BspHI TCATGA 1 cut(s) 1128
BspLI GGNNCC 7 cut(s) 87, 88, 142, 359, 465, 581, 813
BspPI GGATC 1 cut(s) 16
BspT107I GGYRCC 1 cut(s) 579
BspTNI GGTCTC 1 cut(s) 1028
BsrBI CCGCTC 1 cut(s) 130
BsrDI GCAATG 2 cut(s) 252, 959
BsrFI RCCGGY 1 cut(s) 404
BsrI ACTGG 3 cut(s) 424, 1125, 1144
BssAI RCCGGY 1 cut(s) 404
BssECI CCNNGG 2 cut(s) 290, 575
BssMI GATC 4 cut(s) 8, 34, 204, 763
BssNAI GTATAC 1 cut(s) 437
BssNI GRCGYC 2 cut(s) 345, 580
BssT1I CCWWGG 1 cut(s) 290
Bst1107I GTATAC 1 cut(s) 437
Bst2UI CCWGG 3 cut(s) 362, 414, 576
Bst4CI ACNGT 3 cut(s) 20, 178, 902
BstACI GRCGYC 2 cut(s) 345, 580
BstC8I GCNNGC 4 cut(s) 373, 691, 873, 891
BstDEI CTNAG 3 cut(s) 400, 1107, 1206
BstDSI CCRYGG 1 cut(s) 290
BstF5I GGATG 3 cut(s) 78, 607, 955
BstFNI CGCG 5 cut(s) 13, 150, 272, 375, 676
BstH2I RGCGCY 1 cut(s) 583
BstHHI GCGC 2 cut(s) 582, 631
BstKTI GATC 4 cut(s) 11, 37, 207, 766
BstMAI GTCTC 1 cut(s) 1028
BstMBI GATC 4 cut(s) 8, 34, 204, 763
BstMWI GCNNNNNNNGC 3 cut(s) 130, 139, 635
BstNI CCWGG 3 cut(s) 362, 414, 576
BstNSI RCATGY 4 cut(s) 289, 388, 693, 968
BstSCI CCNGG 3 cut(s) 360, 412, 574
BstSLI GKGCMC 3 cut(s) 90, 144, 739
BstUI CGCG 5 cut(s) 13, 150, 272, 375, 676
BstV1I GCAGC 2 cut(s) 241, 1042
BstV2I GAAGAC 4 cut(s) 249, 258, 348, 1190
BstZ17I GTATAC 1 cut(s) 437
BsuRI GGCC 4 cut(s) 88, 142, 278, 310
BtgI CCRYGG 1 cut(s) 290
BtgZI GCGATG 2 cut(s) 352, 1179
BtsCI GGATG 3 cut(s) 78, 607, 955
BtsIMutI CAGTG 2 cut(s) 907, 1056
BtuMI TCGCGA 2 cut(s) 13, 150
Cac8I GCNNGC 4 cut(s) 373, 691, 873, 891
CciI TCATGA 1 cut(s) 1128
CfoI GCGC 2 cut(s) 582, 631
Cfr10I RCCGGY 1 cut(s) 404
Cfr13I GGNCC 7 cut(s) 86, 87, 140, 141, 407, 464, 796
CseI GACGC 3 cut(s) 261, 353, 1019
Csp6I GTAC 1 cut(s) 304
CviAII CATG 9 cut(s) 286, 291, 385, 452, 616, 690, 965, 1129, 1153
CviQI GTAC 1 cut(s) 304
DdeI CTNAG 3 cut(s) 400, 1107, 1206
DinI GGCGCC 1 cut(s) 581
DpnI GATC 4 cut(s) 10, 36, 206, 765
DpnII GATC 4 cut(s) 8, 34, 204, 763
DriI GACNNNNNGTC 1 cut(s) 349
Eam1105I GACNNNNNGTC 1 cut(s) 349
EciI GGCGGA 2 cut(s) 60, 661
Eco130I CCWWGG 1 cut(s) 290
Eco24I GRGCYC 2 cut(s) 90, 144
Eco31I GGTCTC 1 cut(s) 1028
Eco47I GGWCC 3 cut(s) 407, 464, 796
Eco57I CTGAAG 1 cut(s) 1169
EcoO109I RGGNCCY 3 cut(s) 86, 87, 140
EcoRI GAATTC 1 cut(s) 1124
EcoRII CCWGG 3 cut(s) 360, 412, 574
EcoT14I CCWWGG 1 cut(s) 290
EcoT22I ATGCAT 1 cut(s) 502
EcoT38I GRGCYC 2 cut(s) 90, 144
EgeI GGCGCC 1 cut(s) 581
EheI GGCGCC 1 cut(s) 581
ErhI CCWWGG 1 cut(s) 290
FaeI CATG 9 cut(s) 289, 294, 388, 455, 619, 693, 968, 1132, 1156
FalI AAGNNNNNCTT 2 cut(s) 552, 584
FaqI GGGAC 2 cut(s) 164, 477
FatI CATG 9 cut(s) 285, 290, 384, 451, 615, 689, 964, 1128, 1152
FauI CCCGC 2 cut(s) 117, 380
FbaI TGATCA 1 cut(s) 763
FblI GTMKAC 1 cut(s) 436
Fnu4HI GCNGC 3 cut(s) 131, 230, 1031
FokI GGATG 3 cut(s) 85, 614, 942
FriOI GRGCYC 2 cut(s) 90, 144
Fsp4HI GCNGC 3 cut(s) 131, 230, 1031
FspBI CTAG 4 cut(s) 432, 740, 753, 1217
GlaI GCGC 2 cut(s) 581, 630
GluI GCNGC 3 cut(s) 131, 230, 1031
GsaI CCCAGC 1 cut(s) 229
GsuI CTGGAG 2 cut(s) 344, 645
HaeII RGCGCY 1 cut(s) 583
HaeIII GGCC 4 cut(s) 88, 142, 278, 310
HapII CCGG 2 cut(s) 405, 910
HgaI GACGC 3 cut(s) 261, 353, 1019
HhaI GCGC 2 cut(s) 582, 631
Hin1I GRCGYC 2 cut(s) 345, 580
Hin1II CATG 9 cut(s) 289, 294, 388, 455, 619, 693, 968, 1132, 1156
Hin6I GCGC 2 cut(s) 580, 629
HinP1I GCGC 2 cut(s) 580, 629
HincII GTYRAC 1 cut(s) 919
HindII GTYRAC 1 cut(s) 919
HindIII AAGCTT 2 cut(s) 636, 1208
HinfI GANTC 4 cut(s) 171, 906, 979, 1158
HpaII CCGG 2 cut(s) 405, 910
HphI GGTGA 3 cut(s) 538, 872, 1044
Hpy166II GTNNAC 2 cut(s) 437, 919
Hpy188I TCNGA 4 cut(s) 505, 726, 746, 763
Hpy8I GTNNAC 2 cut(s) 437, 919
Hpy99I CGWCG 5 cut(s) 256, 277, 335, 380, 1013
HpyAV CCTTC 4 cut(s) 100, 821, 989, 1126
HpyCH4III ACNGT 3 cut(s) 20, 178, 902
HpyCH4V TGCA 6 cut(s) 449, 500, 689, 693, 889, 964
HpyF10VI GCNNNNNNNGC 3 cut(s) 130, 139, 635
HpyF3I CTNAG 3 cut(s) 400, 1107, 1206
Hsp92I GRCGYC 2 cut(s) 345, 580
Hsp92II CATG 9 cut(s) 289, 294, 388, 455, 619, 693, 968, 1132, 1156
HspAI GCGC 2 cut(s) 580, 629
KasI GGCGCC 1 cut(s) 579
Ksp22I TGATCA 1 cut(s) 763
Kzo9I GATC 4 cut(s) 8, 34, 204, 763
LmnI GCTCC 3 cut(s) 127, 363, 626
Lsp1109I GCAGC 2 cut(s) 241, 1042
LweI GCATC 1 cut(s) 509
MaeI CTAG 4 cut(s) 432, 740, 753, 1217
MaeIII GTNAC 6 cut(s) 61, 160, 562, 944, 983, 1223
MalI GATC 4 cut(s) 10, 36, 206, 765
MbiI CCGCTC 1 cut(s) 130
MboI GATC 4 cut(s) 8, 34, 204, 763
MboII GAAGA 6 cut(s) 249, 252, 258, 353, 1175, 1190
MhlI GDGCHC 3 cut(s) 90, 144, 739
MluCI AATT 7 cut(s) 211, 469, 588, 667, 1001, 1093, 1124
Mly113I GGCGCC 1 cut(s) 580
Mph1103I ATGCAT 1 cut(s) 502
MroXI GAANNNNTTC 1 cut(s) 810
MseI TTAA 2 cut(s) 540, 1089
MspA1I CMGCKG 1 cut(s) 1189
MspI CCGG 2 cut(s) 405, 910
MspR9I CCNGG 3 cut(s) 362, 414, 576
Mva1269I GAATGC 1 cut(s) 502
MvaI CCWGG 3 cut(s) 362, 414, 576
MvnI CGCG 5 cut(s) 13, 150, 272, 375, 676
MwoI GCNNNNNNNGC 3 cut(s) 130, 139, 635
NarI GGCGCC 1 cut(s) 580
NcoI CCATGG 1 cut(s) 290
NdeII GATC 4 cut(s) 8, 34, 204, 763
NlaIII CATG 9 cut(s) 289, 294, 388, 455, 619, 693, 968, 1132, 1156
NlaIV GGNNCC 7 cut(s) 87, 88, 142, 359, 465, 581, 813
NmuCI GTSAC 4 cut(s) 61, 160, 944, 1223
NruI TCGCGA 2 cut(s) 13, 150
NsiI ATGCAT 1 cut(s) 502
NspI RCATGY 4 cut(s) 289, 388, 693, 968
PaeI GCATGC 1 cut(s) 693
PagI TCATGA 1 cut(s) 1128
PcsI WCGNNNNNNNCGW 5 cut(s) 260, 269, 327, 336, 345
PctI GAATGC 1 cut(s) 502
PdmI GAANNNNTTC 1 cut(s) 810
PfeI GAWTC 4 cut(s) 171, 906, 979, 1158
PflFI GACNNNGTC 1 cut(s) 329
PfoI TCCNGGA 1 cut(s) 412
PkrI GCNGC 3 cut(s) 132, 231, 1032
PluTI GGCGCC 1 cut(s) 583
Psp6I CCWGG 3 cut(s) 360, 412, 574
PspFI CCCAGC 1 cut(s) 225
PspGI CCWGG 3 cut(s) 360, 412, 574
PspN4I GGNNCC 7 cut(s) 87, 88, 142, 359, 465, 581, 813
PspOMI GGGCCC 2 cut(s) 86, 140
PspPI GGNCC 7 cut(s) 86, 87, 140, 141, 407, 464, 796
PsyI GACNNNGTC 1 cut(s) 329
PvuII CAGCTG 1 cut(s) 1189
RruI TCGCGA 2 cut(s) 13, 150
RsaI GTAC 1 cut(s) 305
RsaNI GTAC 1 cut(s) 304
SaqAI TTAA 2 cut(s) 540, 1089
SatI GCNGC 3 cut(s) 131, 230, 1031
Sau3AI GATC 4 cut(s) 8, 34, 204, 763
Sau96I GGNCC 7 cut(s) 86, 87, 140, 141, 407, 464, 796
ScrFI CCNGG 3 cut(s) 362, 414, 576
SduI GDGCHC 3 cut(s) 90, 144, 739
SfaNI GCATC 1 cut(s) 509
SfoI GGCGCC 1 cut(s) 581
SinI GGWCC 3 cut(s) 407, 464, 796
SmlI CTYRAG 1 cut(s) 1025
SmoI CTYRAG 1 cut(s) 1025
SpeI ACTAGT 1 cut(s) 431
SphI GCATGC 1 cut(s) 693
Sse9I AATT 7 cut(s) 211, 469, 588, 667, 1001, 1093, 1124
SsiI CCGC 9 cut(s) 45, 59, 94, 124, 130, 270, 373, 646, 676
SspDI GGCGCC 1 cut(s) 579
SspMI CTAG 4 cut(s) 432, 740, 753, 1217
StyD4I CCNGG 3 cut(s) 360, 412, 574
StyI CCWWGG 1 cut(s) 290
TaaI ACNGT 3 cut(s) 20, 178, 902
TaqI TCGA 4 cut(s) 37, 119, 209, 353
TasI AATT 7 cut(s) 211, 469, 588, 667, 1001, 1093, 1124
TatI WGTACW 1 cut(s) 303
TauI GCSGC 1 cut(s) 133
TfiI GAWTC 4 cut(s) 171, 906, 979, 1158
Tru1I TTAA 2 cut(s) 540, 1089
Tru9I TTAA 2 cut(s) 540, 1089
TscAI CASTG 2 cut(s) 907, 1063
TseFI GTSAC 4 cut(s) 61, 160, 944, 1223
TseI GCWGC 2 cut(s) 229, 1030
Tsp45I GTSAC 4 cut(s) 61, 160, 944, 1223
TspDTI ATGAA 3 cut(s) 618, 1117, 1145
TspGWI ACGGA 1 cut(s) 1070
TspRI CASTG 2 cut(s) 907, 1063
Tth111I GACNNNGTC 1 cut(s) 329
VpaK11BI GGWCC 3 cut(s) 407, 464, 796
XapI RAATTY 4 cut(s) 211, 667, 1001, 1124
XbaI TCTAGA 1 cut(s) 752
XceI RCATGY 4 cut(s) 289, 388, 693, 968
XmiI GTMKAC 1 cut(s) 436
XmnI GAANNNNTTC 1 cut(s) 810
XspI CTAG 4 cut(s) 432, 740, 753, 1217
Zsp2I ATGCAT 1 cut(s) 502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.