Lys-63-specific deubiquitinase
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom17g20820 |
| rosa_chinensis | RchiOBHm_Chr2g0136631 |
| rosa_multiflora | Rmu_sc0006440.1_g000006 |
| rosa_samantha | Rh2BG389600 Rh2CG369300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 15 |
| AclWI | GGATC | 1 cut(s) | 171 |
| AcsI | RAATTY | 1 cut(s) | 91 |
| AcyI | GRCGYC | 1 cut(s) | 12 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 123, 160 |
| AgsI | TTSAA | 1 cut(s) | 173 |
| AluBI | AGCT | 1 cut(s) | 206 |
| AluI | AGCT | 1 cut(s) | 206 |
| Alw26I | GTCTC | 1 cut(s) | 44 |
| AlwI | GGATC | 1 cut(s) | 171 |
| AoxI | GGCC | 1 cut(s) | 67 |
| ApeKI | GCWGC | 2 cut(s) | 194, 197 |
| ApoI | RAATTY | 1 cut(s) | 91 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| AsuHPI | GGTGA | 2 cut(s) | 92, 126 |
| BbvI | GCAGC | 2 cut(s) | 181, 184 |
| BceAI | ACGGC | 1 cut(s) | 101 |
| BcoDI | GTCTC | 1 cut(s) | 44 |
| BisI | GCNGC | 2 cut(s) | 195, 198 |
| BlsI | GCNGC | 2 cut(s) | 196, 199 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmsI | GCATC | 2 cut(s) | 209, 216 |
| Bpu10I | CCTNAGC | 1 cut(s) | 183 |
| BpuEI | CTTGAG | 1 cut(s) | 192 |
| BsaHI | GRCGYC | 1 cut(s) | 12 |
| BsaI | GGTCTC | 1 cut(s) | 44 |
| BsaJI | CCNNGG | 1 cut(s) | 54 |
| BsaWI | WCCGGW | 1 cut(s) | 153 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 123, 160 |
| BseDI | CCNNGG | 1 cut(s) | 54 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 123, 160 |
| BseMII | CTCAG | 1 cut(s) | 174 |
| BseRI | GAGGAG | 1 cut(s) | 71 |
| BseXI | GCAGC | 2 cut(s) | 181, 184 |
| BshFI | GGCC | 1 cut(s) | 69 |
| BsiSI | CCGG | 1 cut(s) | 154 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 123, 160 |
| BsmAI | GTCTC | 1 cut(s) | 44 |
| BsnI | GGCC | 1 cut(s) | 69 |
| Bso31I | GGTCTC | 1 cut(s) | 44 |
| Bsp143I | GATC | 3 cut(s) | 60, 146, 163 |
| BspANI | GGCC | 1 cut(s) | 69 |
| BspCNI | CTCAG | 1 cut(s) | 175 |
| BspPI | GGATC | 1 cut(s) | 171 |
| BspTNI | GGTCTC | 1 cut(s) | 44 |
| BssECI | CCNNGG | 1 cut(s) | 54 |
| BssMI | GATC | 3 cut(s) | 60, 146, 163 |
| BssNI | GRCGYC | 1 cut(s) | 12 |
| BstACI | GRCGYC | 1 cut(s) | 12 |
| BstDEI | CTNAG | 1 cut(s) | 183 |
| BstKTI | GATC | 3 cut(s) | 63, 149, 166 |
| BstMAI | GTCTC | 1 cut(s) | 44 |
| BstMBI | GATC | 3 cut(s) | 60, 146, 163 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 203 |
| BstV1I | GCAGC | 2 cut(s) | 181, 184 |
| BsuRI | GGCC | 1 cut(s) | 69 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| CseI | GACGC | 1 cut(s) | 120 |
| CviAII | CATG | 2 cut(s) | 35, 64 |
| CviJI | RGCY | 4 cut(s) | 69, 194, 206, 212 |
| CviKI_1 | RGCY | 4 cut(s) | 69, 194, 206, 212 |
| DdeI | CTNAG | 1 cut(s) | 183 |
| DpnI | GATC | 3 cut(s) | 62, 148, 165 |
| DpnII | GATC | 3 cut(s) | 60, 146, 163 |
| Eco31I | GGTCTC | 1 cut(s) | 44 |
| EcoRI | GAATTC | 1 cut(s) | 91 |
| EcoT22I | ATGCAT | 1 cut(s) | 40 |
| FaeI | CATG | 2 cut(s) | 38, 67 |
| FaiI | YATR | 3 cut(s) | 29, 36, 65 |
| FatI | CATG | 2 cut(s) | 34, 63 |
| Fnu4HI | GCNGC | 2 cut(s) | 195, 198 |
| Fsp4HI | GCNGC | 2 cut(s) | 195, 198 |
| GluI | GCNGC | 2 cut(s) | 195, 198 |
| HaeIII | GGCC | 1 cut(s) | 69 |
| HapII | CCGG | 1 cut(s) | 154 |
| HgaI | GACGC | 1 cut(s) | 120 |
| Hin1I | GRCGYC | 1 cut(s) | 12 |
| Hin1II | CATG | 2 cut(s) | 38, 67 |
| HincII | GTYRAC | 1 cut(s) | 21 |
| HindII | GTYRAC | 1 cut(s) | 21 |
| HinfI | GANTC | 1 cut(s) | 31 |
| HpaI | GTTAAC | 1 cut(s) | 21 |
| HpaII | CCGG | 1 cut(s) | 154 |
| HphI | GGTGA | 2 cut(s) | 92, 126 |
| Hpy166II | GTNNAC | 2 cut(s) | 21, 45 |
| Hpy188I | TCNGA | 2 cut(s) | 7, 151 |
| Hpy188III | TCNNGA | 1 cut(s) | 182 |
| Hpy8I | GTNNAC | 2 cut(s) | 21, 45 |
| HpyAV | CCTTC | 2 cut(s) | 83, 154 |
| HpyCH4IV | ACGT | 1 cut(s) | 12 |
| HpyCH4V | TGCA | 3 cut(s) | 38, 98, 200 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 203 |
| HpyF3I | CTNAG | 1 cut(s) | 183 |
| HpySE526I | ACGT | 1 cut(s) | 12 |
| Hsp92I | GRCGYC | 1 cut(s) | 12 |
| Hsp92II | CATG | 2 cut(s) | 38, 67 |
| KspAI | GTTAAC | 1 cut(s) | 21 |
| Kzo9I | GATC | 3 cut(s) | 60, 146, 163 |
| LmnI | GCTCC | 1 cut(s) | 128 |
| LpnPI | CCDG | 2 cut(s) | 167, 195 |
| Lsp1109I | GCAGC | 2 cut(s) | 181, 184 |
| LweI | GCATC | 2 cut(s) | 209, 216 |
| MaeII | ACGT | 1 cut(s) | 12 |
| MaeIII | GTNAC | 2 cut(s) | 109, 132 |
| MalI | GATC | 3 cut(s) | 62, 148, 165 |
| MboI | GATC | 3 cut(s) | 60, 146, 163 |
| MluCI | AATT | 1 cut(s) | 91 |
| MlyI | GAGTC | 1 cut(s) | 25 |
| MnlI | CCTC | 4 cut(s) | 49, 80, 147, 150 |
| Mph1103I | ATGCAT | 1 cut(s) | 40 |
| MseI | TTAA | 2 cut(s) | 20, 235 |
| MspI | CCGG | 1 cut(s) | 154 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 203 |
| NdeII | GATC | 3 cut(s) | 60, 146, 163 |
| NlaIII | CATG | 2 cut(s) | 38, 67 |
| NmuCI | GTSAC | 2 cut(s) | 109, 132 |
| NsiI | ATGCAT | 1 cut(s) | 40 |
| PkrI | GCNGC | 2 cut(s) | 196, 199 |
| PleI | GAGTC | 1 cut(s) | 25 |
| PpsI | GAGTC | 1 cut(s) | 25 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| SaqAI | TTAA | 2 cut(s) | 20, 235 |
| SatI | GCNGC | 2 cut(s) | 195, 198 |
| Sau3AI | GATC | 3 cut(s) | 60, 146, 163 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| SchI | GAGTC | 1 cut(s) | 25 |
| SetI | ASST | 3 cut(s) | 15, 139, 208 |
| SfaNI | GCATC | 2 cut(s) | 209, 216 |
| SmlI | CTYRAG | 1 cut(s) | 207 |
| SmoI | CTYRAG | 1 cut(s) | 207 |
| Sse9I | AATT | 1 cut(s) | 91 |
| TaiI | ACGT | 1 cut(s) | 15 |
| TaqI | TCGA | 1 cut(s) | 145 |
| TaqII | GACCGA | 1 cut(s) | 68 |
| TasI | AATT | 1 cut(s) | 91 |
| Tru1I | TTAA | 2 cut(s) | 20, 235 |
| Tru9I | TTAA | 2 cut(s) | 20, 235 |
| TseFI | GTSAC | 2 cut(s) | 109, 132 |
| TseI | GCWGC | 2 cut(s) | 194, 197 |
| Tsp45I | GTSAC | 2 cut(s) | 109, 132 |
| XapI | RAATTY | 1 cut(s) | 91 |
| ZraI | GACGTC | 1 cut(s) | 13 |
| Zsp2I | ATGCAT | 1 cut(s) | 40 |