Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007617.1

Orthogroup ID

OG0004585

Physical Location & Seq

Genomic Coordinates Forward (+)

69013 .. 74372

Gene Structure 5360 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007617.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2574 bp

atggtagacccttatgggacaaatcctggaccaattgatggttcggtgctttatgatcaggagaagcatgtctcctcagctgtttgggatggacaggagcgtggtgcacttagatgccatgaacacacatcaaagctcgatcaatggactctaacggatacacagttggagttggtagagaaggctggatttggttatttaagattgattcctgctattagtctagacaacccactcatttcggcactagttgaaagatggaggagggaaacaaacacttttcacctgaatgttggagaaatgacagtaaccctgaaggatgttgcactattgcttggactatcaattgatggagaccctgttatgggtgtaacatataccacctgtaactcagtttgtgaaaaatttcttggaaaaacaccagagtctagttatattagtggtggaatggtaaagctaagctggttgaaagagttcttttcgcgttgtcctgaagatgctccacttgaagtgattgagtaccacacacgtgcctacctcttatatcttgttggaagtacaatattttccactaccactgggaataaagtccctgtcatgtaccttccattgtttggagatttagaccaatgtgggaaatatgcctggggagcagcagccttggcatttttgtacagggcacttggcaatgcctctctgagatctcaaagtacgattagtggttgtttgacacttcttcagtgctggagttactttcacctgaatattggacgaccaaagctcaatcaagattcaatgcatgatcgttttccttttgtgcttagctggaaaggaaaacaaagtgggcccacaacaaaccgagatgtagttttttaccgtaaagttctggattccctgaaagaatgtgatgtggagtggcgtccttatagacatctggatagtagtgttatcccaaaagaaataacgagtaatctgattctaggaaggtcaaaaacaatgctaatttgctttgacaaggcagaaaggcatctcccaaatcgttgtctaaggcaatttggcatcccccagtcaatcccagaggatgtagagcgatgggagcgaaaaagtcgcggagttgatggtggggttgatttgtcagcgaaaatggagtcagagcttaatgaatggttcgaacgtcgattccatattgtggtagaggatgatgatgcagatgaaagtgagtacatgcaatggtacctgaaaattacacgtaaatttgttgggagacccatctctctctcatctgagtttcaaagaacgaatgctggtttgagagatattgcacacatagctgatacattctcaacaaagggtttggatcctgaacaagttgagttaatatctaggatcaggtatattgcccatgaatgtttgagggaccagattgggggtccagccagagtgtcgccctccccacacaatgaacttggcaaaaggataagagggaaggagagggtaagaagaaaaggtgcaggaaaacgtttgcggaaggatcatccagtacaatatcacactgctagtgaaggtgatcaatctccgttttctggtgccaccgtttctgttgatcgattacaatcgtatcatgcacatagggaggaggatcatttgccattatatcctgttgaaaatgaggtcactgctttgcatatgatcagtggggatgatgacattggtttcgatcagtcagagctggtccaggtgactggtgaggaaagtaacactgagctaagccatgcagttgtgaaggttgatgaaacccacctttttgaagcaactgaaaagataaacgactcacaaatttgtaatgcaatgaacgaggtcaaggacttccgaatttctaattcaactaaggttgattctcagatttgtaatgcaacgacggtcattgactcacagctctgtgatgcaccggaggaggttatcaactcacagatttgcaatgcagatcaggaggttgacgattcacatgcttgtgatgcaacacaggaggctaccgactctcgtctttctgcagcatctgaaaaggttgatgactccgagcttcctgaacttaccactgaaagtgatcgacaaacagctaaattggaaacagaggttccagaagcttctcttgagattcctcaggatattgcaaaccagacacgtggcacatgctggtttaaaggagatgcactagacgacaagaaagtggagtcactcgccagggattgcagcgccacgcgtcgtccgttcgtgacccagtcgctgccttcagcgcgttgcagtggacggcctgctgctgctgtcgcttcacacgtcaatcatcgggccgagctggcagcccttcttcccccttcttcccccttcttccccagtcatgaaataagtcattctgttgccttatttcttcccctcagtcaagaaaagccaataaatggctgggcaaactttcaccggtggaggaccgattttgctcttgcccggtcaccacgtcggttttccttgcttttgcccgggcaaagtgcaaccgctgcacttgctctaaactcaatttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PMD

Protein Analysis

857

Amino Acids

96.03

Weight (kDa)

5.52

Isoelectric Point (pI)

49.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004585)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04865 AT2G04865
fragaria_vesca	FvH4_6g37771 FvH4_6g37771 FvH4_6g37771 FvH4_6g37771 FvH4_6g37771 FvH4_6g37771 FvH4_6g37771 FvH4_6g37771 FvH4_6g37771 FvH4_6g37771 FvH4_6g37771
malus_domestica	MD09G1156100.v1.1 MD17G1142200.v1.1 MD17G1142300.v1.1
prunus_persica	Prupe.3G169000_v2.0.a1
pyrus_communis	pycom09g07490 pycom17g13540 pycom17g13550 pycom17g13560
rosa_chinensis	RchiOBHm_Chr2g0150841
rosa_laevigata	RLG00000020511
rosa_multiflora	Rmu_sc0007617.1_g000015
rosa_roxburghii	Rroxscaffold_2G00096920
rosa_rugosa	Rorug02G0422700 Rorug02G0422800
rosa_samantha	Rh2AG483000 Rh2CG469300 Rh2DG506400
rosa_wichuraiana	Rw2G039590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1233
AccB1I	GGYRCC	2 cut(s)	1233, 1586
AccB7I	CCANNNNNTGG	4 cut(s)	38, 614, 1189, 2453
AccI	GTMKAC	1 cut(s)	6
AccII	CGCG	4 cut(s)	484, 1110, 2260, 2296
AciI	CCGC	3 cut(s)	1110, 1525, 2547
AclI	AACGTT	1 cut(s)	1519
AclWI	GGATC	5 cut(s)	1352, 1365, 1394, 1539, 1647
AcsI	RAATTY	4 cut(s)	404, 1253, 1836, 1872
AcuI	CTGAAG	4 cut(s)	335, 513, 722, 2274
AcvI	CACGTG	2 cut(s)	530, 2183
AcyI	GRCGYC	1 cut(s)	919
AfaI	GTAC	8 cut(s)	521, 559, 602, 674, 712, 1223, 1235, 1542
AfiI	CCNNNNNNNGG	8 cut(s)	38, 364, 365, 614, 1189, 1426, 1583, 2453
AflIII	ACRYGT	5 cut(s)	527, 1247, 2180, 2258, 2332
AgeI	ACCGGT	1 cut(s)	2472
AgsI	TTSAA	8 cut(s)	254, 469, 509, 795, 1292, 1664, 1808, 1884
AhlI	ACTAGT	1 cut(s)	247
AjiI	CACGTC	2 cut(s)	2335, 2510
AjnI	CCWGG	4 cut(s)	25, 644, 1734, 2240
AjuI	GAANNNNNNNTTGG	4 cut(s)	25, 57, 393, 425
AleI	CACNNNNGTG	1 cut(s)	528
AloI	GAACNNNNNNTCC	2 cut(s)	1164, 1196
Alw21I	GWGCWC	1 cut(s)	109
Alw26I	GTCTC	3 cut(s)	76, 348, 1258
Alw44I	GTGCAC	1 cut(s)	105
AlwI	GGATC	5 cut(s)	1352, 1365, 1394, 1539, 1647
AlwNI	CAGNNNCTG	2 cut(s)	2057, 2284
Ama87I	CYCGRG	1 cut(s)	2531
AoxI	GGCC	3 cut(s)	845, 2309, 2346
ApaI	GGGCCC	1 cut(s)	849
ApaLI	GTGCAC	1 cut(s)	105
ApeKI	GCWGC	9 cut(s)	653, 656, 2051, 2250, 2284, 2315, 2318, 2357, 2549
ApoI	RAATTY	4 cut(s)	404, 1253, 1836, 1872
ArsI	GACNNNNNNTTYG	4 cut(s)	1133, 1165, 1697, 1729
AsiGI	ACCGGT	1 cut(s)	2472
Asp700I	GAANNNNTTC	2 cut(s)	405, 473
Asp718I	GGTACC	1 cut(s)	1233
AspLEI	GCGC	2 cut(s)	2255, 2296
AspS9I	GGNCC	8 cut(s)	29, 845, 846, 1417, 1430, 1732, 2346, 2481
AsuC2I	CCSGG	3 cut(s)	2500, 2532, 2533
AsuHPI	GGTGA	7 cut(s)	275, 749, 1577, 1750, 1757, 2462, 2496
AsuII	TTCGAA	1 cut(s)	1170
AvaI	CYCGRG	1 cut(s)	2531
AvaII	GGWCC	5 cut(s)	29, 1417, 1430, 1732, 2481
AxyI	CCTNAGG	1 cut(s)	2160
BaeGI	GKGCMC	3 cut(s)	109, 682, 849
BaeI	ACNNNNGTAYC	2 cut(s)	1601, 1634
BamHI	GGATCC	1 cut(s)	1357
BanI	GGYRCC	2 cut(s)	1233, 1586
BanII	GRGCYC	1 cut(s)	849
BbrPI	CACGTG	2 cut(s)	530, 2183
Bbv12I	GWGCWC	1 cut(s)	109
BbvCI	CCTCAGC	1 cut(s)	76
BbvI	GCAGC	9 cut(s)	665, 668, 2063, 2262, 2271, 2302, 2305, 2369, 2536
BccI	CCATC	7 cut(s)	32, 83, 252, 344, 1086, 1112, 1277
BceAI	ACGGC	1 cut(s)	2324
BcgI	CGANNNNNNTGC	2 cut(s)	1988, 2022
BciT130I	CCWGG	4 cut(s)	27, 646, 1736, 2242
BciVI	GTATCC	1 cut(s)	151
BclI	TGATCA	3 cut(s)	55, 1567, 1689
BcnI	CCSGG	3 cut(s)	2500, 2532, 2533
BcoDI	GTCTC	3 cut(s)	76, 348, 1258
BcuI	ACTAGT	1 cut(s)	247
BfaI	CTAG	7 cut(s)	224, 248, 429, 980, 1383, 1557, 2213
BfmI	CTRYAG	1 cut(s)	2049
BfoI	RGCGCY	1 cut(s)	2256
BfuI	GTATCC	1 cut(s)	151
BglI	GCCNNNNNGGC	1 cut(s)	2354
BglII	AGATCT	1 cut(s)	701
BisI	GCNGC	9 cut(s)	654, 657, 2052, 2251, 2285, 2316, 2319, 2358, 2550
BlpI	GCTNAGC	3 cut(s)	458, 821, 1766
BlsI	GCNGC	9 cut(s)	655, 658, 2053, 2252, 2286, 2317, 2320, 2359, 2551
Bme1390I	CCNGG	7 cut(s)	27, 646, 1736, 2242, 2500, 2532, 2533
Bme18I	GGWCC	5 cut(s)	29, 1417, 1430, 1732, 2481
BmeT110I	CYCGRG	1 cut(s)	2531
BmgBI	CACGTC	2 cut(s)	2335, 2510
BmgT120I	GGNCC	8 cut(s)	29, 845, 846, 1417, 1430, 1732, 2346, 2481
BmiI	GGNNCC	7 cut(s)	847, 1235, 1359, 1418, 1431, 1588, 2136
BmrFI	CCNGG	7 cut(s)	27, 646, 1736, 2242, 2500, 2532, 2533
BmrI	ACTGGG	4 cut(s)	588, 1060, 2272, 2385
BmsI	GCATC	9 cut(s)	104, 487, 1036, 1068, 1195, 1933, 2005, 2063, 2197
BmuI	ACTGGG	4 cut(s)	588, 1060, 2272, 2385
BoxI	GACNNNNGTC	1 cut(s)	2040
BpmI	CTGGAG	1 cut(s)	766
Bpu10I	CCTNAGC	1 cut(s)	76
Bpu1102I	GCTNAGC	3 cut(s)	458, 821, 1766
Bpu14I	TTCGAA	1 cut(s)	1170
BpuEI	CTTGAG	1 cut(s)	2171
BpuMI	CCSGG	3 cut(s)	2500, 2532, 2533
Bsa29I	ATCGAT	1 cut(s)	1606
BsaAI	YACGTR	3 cut(s)	530, 1250, 2183
BsaBI	GATNNNNATC	1 cut(s)	1612
BsaHI	GRCGYC	1 cut(s)	919
BsaI	GGTCTC	2 cut(s)	348, 1258
BsaJI	CCNNGG	4 cut(s)	645, 660, 2241, 2531
BsaWI	WCCGGW	2 cut(s)	1948, 2472
BsaXI	ACNNNNNCTCC	2 cut(s)	345, 375
Bsc4I	CCNNNNNNNGG	8 cut(s)	38, 364, 365, 614, 1189, 1426, 1583, 2453
Bse118I	RCCGGY	1 cut(s)	2472
Bse1I	ACTGG	6 cut(s)	583, 1066, 1538, 1747, 2278, 2391
Bse21I	CCTNAGG	1 cut(s)	2160
Bse3DI	GCAATG	4 cut(s)	694, 1235, 1854, 1984
Bse8I	GATNNNNATC	1 cut(s)	1612
BseBI	CCWGG	4 cut(s)	27, 646, 1736, 2242
BseCI	ATCGAT	1 cut(s)	1606
BseDI	CCNNGG	4 cut(s)	645, 660, 2241, 2531
BseGI	GGATG	7 cut(s)	94, 325, 1059, 1087, 1204, 1534, 1705
BseJI	GATNNNNATC	1 cut(s)	1612
BseLI	CCNNNNNNNGG	8 cut(s)	38, 364, 365, 614, 1189, 1426, 1583, 2453
BseMI	GCAATG	4 cut(s)	694, 1235, 1854, 1984
BseMII	CTCAG	8 cut(s)	90, 405, 689, 1275, 1752, 1913, 2174, 2446
BseNI	ACTGG	6 cut(s)	583, 1066, 1538, 1747, 2278, 2391
BseRI	GAGGAG	4 cut(s)	64, 277, 1649, 1967
BseSI	GKGCMC	3 cut(s)	109, 682, 849
BseXI	GCAGC	9 cut(s)	665, 668, 2063, 2262, 2271, 2302, 2305, 2369, 2536
BseYI	CCCAGC	1 cut(s)	2457
BsgI	GTGCAG	2 cut(s)	1530, 2535
Bsh1236I	CGCG	4 cut(s)	484, 1110, 2260, 2296
BshFI	GGCC	3 cut(s)	847, 2311, 2348
BshNI	GGYRCC	2 cut(s)	1233, 1586
BshTI	ACCGGT	1 cut(s)	2472
BshVI	ATCGAT	1 cut(s)	1606
BsiHKAI	GWGCWC	1 cut(s)	109
BsiHKCI	CYCGRG	1 cut(s)	2531
BsiSI	CCGG	4 cut(s)	1949, 2473, 2500, 2532
BslFI	GGGAC	3 cut(s)	31, 575, 1430
BslI	CCNNNNNNNGG	8 cut(s)	38, 364, 365, 614, 1189, 1426, 1583, 2453
BsmAI	GTCTC	3 cut(s)	76, 348, 1258
BsmFI	GGGAC	3 cut(s)	31, 575, 1430
BsmI	GAATGC	1 cut(s)	1306
BsnI	GGCC	3 cut(s)	847, 2311, 2348
Bso31I	GGTCTC	2 cut(s)	348, 1258
BsoBI	CYCGRG	1 cut(s)	2531
Bsp119I	TTCGAA	1 cut(s)	1170
Bsp120I	GGGCCC	1 cut(s)	845
Bsp1286I	GDGCHC	3 cut(s)	109, 682, 849
Bsp1407I	TGTACA	1 cut(s)	672
Bsp1720I	GCTNAGC	3 cut(s)	458, 821, 1766
BspACI	CCGC	3 cut(s)	1110, 1525, 2547
BspANI	GGCC	3 cut(s)	847, 2311, 2348
BspCNI	CTCAG	8 cut(s)	89, 404, 690, 1276, 1753, 1912, 2173, 2445
BspDI	ATCGAT	1 cut(s)	1606
BspFNI	CGCG	4 cut(s)	484, 1110, 2260, 2296
BspHI	TCATGA	1 cut(s)	2395
BspLI	GGNNCC	7 cut(s)	847, 1235, 1359, 1418, 1431, 1588, 2136
BspMAI	CTGCAG	1 cut(s)	2053
BspPI	GGATC	5 cut(s)	1352, 1365, 1394, 1539, 1647
BspT104I	TTCGAA	1 cut(s)	1170
BspT107I	GGYRCC	2 cut(s)	1233, 1586
BspTNI	GGTCTC	2 cut(s)	348, 1258
BsrDI	GCAATG	4 cut(s)	694, 1235, 1854, 1984
BsrFI	RCCGGY	1 cut(s)	2472
BsrGI	TGTACA	1 cut(s)	672
BsrI	ACTGG	6 cut(s)	583, 1066, 1538, 1747, 2278, 2391
BssAI	RCCGGY	1 cut(s)	2472
BssECI	CCNNGG	4 cut(s)	645, 660, 2241, 2531
BssNI	GRCGYC	1 cut(s)	919
BssT1I	CCWWGG	1 cut(s)	660
Bst2UI	CCWGG	4 cut(s)	27, 646, 1736, 2242
Bst4CI	ACNGT	5 cut(s)	165, 307, 878, 1594, 1921
BstACI	GRCGYC	1 cut(s)	919
BstAPI	GCANNNNNTGC	1 cut(s)	2549
BstAUI	TGTACA	1 cut(s)	672
BstBAI	YACGTR	3 cut(s)	530, 1250, 2183
BstBI	TTCGAA	1 cut(s)	1170
BstC8I	GCNNGC	2 cut(s)	2313, 2355
BstEII	GGTNACC	1 cut(s)	2502
BstF5I	GGATG	7 cut(s)	94, 325, 1059, 1087, 1204, 1534, 1705
BstFNI	CGCG	4 cut(s)	484, 1110, 2260, 2296
BstH2I	RGCGCY	1 cut(s)	2256
BstHHI	GCGC	2 cut(s)	2255, 2296
BstMAI	GTCTC	3 cut(s)	76, 348, 1258
BstNI	CCWGG	4 cut(s)	27, 646, 1736, 2242
BstNSI	RCATGY	4 cut(s)	71, 1228, 2009, 2193
BstPAI	GACNNNNGTC	1 cut(s)	2040
BstPI	GGTNACC	1 cut(s)	2502
BstSCI	CCNGG	7 cut(s)	25, 644, 1734, 2240, 2498, 2530, 2531
BstSFI	CTRYAG	1 cut(s)	2049
BstSLI	GKGCMC	3 cut(s)	109, 682, 849
BstUI	CGCG	4 cut(s)	484, 1110, 2260, 2296
BstV1I	GCAGC	9 cut(s)	665, 668, 2063, 2262, 2271, 2302, 2305, 2369, 2536
BstX2I	RGATCY	2 cut(s)	701, 1357
BstXI	CCANNNNNNTGG	2 cut(s)	1742, 2183
BstYI	RGATCY	2 cut(s)	701, 1357
Bsu15I	ATCGAT	1 cut(s)	1606
Bsu36I	CCTNAGG	1 cut(s)	2160
BsuI	GTATCC	1 cut(s)	151
BsuRI	GGCC	3 cut(s)	847, 2311, 2348
BsuTUI	ATCGAT	1 cut(s)	1606
BtgZI	GCGATG	1 cut(s)	1105
BtrI	CACGTC	2 cut(s)	2335, 2510
BtsCI	GGATG	7 cut(s)	94, 325, 1059, 1087, 1204, 1534, 1705
BtsI	GCAGTG	3 cut(s)	1551, 1674, 2308
BtsIMutI	CAGTG	8 cut(s)	576, 746, 1551, 1674, 1699, 1758, 2094, 2308
Cac8I	GCNNGC	2 cut(s)	2313, 2355
CaiI	CAGNNNCTG	2 cut(s)	2057, 2284
CciI	TCATGA	1 cut(s)	2395
CfoI	GCGC	2 cut(s)	2255, 2296
Cfr10I	RCCGGY	1 cut(s)	2472
Cfr13I	GGNCC	8 cut(s)	29, 845, 846, 1417, 1430, 1732, 2346, 2481
Cfr9I	CCCGGG	1 cut(s)	2531
ClaI	ATCGAT	1 cut(s)	1606
CseI	GACGC	2 cut(s)	908, 2249
Csp6I	GTAC	8 cut(s)	520, 558, 601, 673, 711, 1222, 1234, 1541
CspAI	ACCGGT	1 cut(s)	2472
CviQI	GTAC	8 cut(s)	520, 558, 601, 673, 711, 1222, 1234, 1541
DraI	TTTAAA	1 cut(s)	2200
Eco130I	CCWWGG	1 cut(s)	660
Eco24I	GRGCYC	1 cut(s)	849
Eco31I	GGTCTC	2 cut(s)	348, 1258
Eco47I	GGWCC	5 cut(s)	29, 1417, 1430, 1732, 2481
Eco57I	CTGAAG	4 cut(s)	335, 513, 722, 2274
Eco72I	CACGTG	2 cut(s)	530, 2183
Eco81I	CCTNAGG	1 cut(s)	2160
Eco88I	CYCGRG	1 cut(s)	2531
Eco91I	GGTNACC	1 cut(s)	2502
EcoO65I	GGTNACC	1 cut(s)	2502
EcoRII	CCWGG	4 cut(s)	25, 644, 1734, 2240
EcoT14I	CCWWGG	1 cut(s)	660
EcoT22I	ATGCAT	1 cut(s)	801
EcoT38I	GRGCYC	1 cut(s)	849
ErhI	CCWWGG	1 cut(s)	660
FalI	AAGNNNNNCTT	2 cut(s)	2133, 2165
FaqI	GGGAC	3 cut(s)	31, 575, 1430
FauNDI	CATATG	1 cut(s)	1686
FbaI	TGATCA	3 cut(s)	55, 1567, 1689
FblI	GTMKAC	1 cut(s)	6
Fnu4HI	GCNGC	9 cut(s)	654, 657, 2052, 2251, 2285, 2316, 2319, 2358, 2550
FokI	GGATG	7 cut(s)	101, 332, 1046, 1094, 1211, 1521, 1712
FriOI	GRGCYC	1 cut(s)	849
Fsp4HI	GCNGC	9 cut(s)	654, 657, 2052, 2251, 2285, 2316, 2319, 2358, 2550
FspBI	CTAG	7 cut(s)	224, 248, 429, 980, 1383, 1557, 2213
GlaI	GCGC	2 cut(s)	2254, 2295
GluI	GCNGC	9 cut(s)	654, 657, 2052, 2251, 2285, 2316, 2319, 2358, 2550
GsaI	CCCAGC	1 cut(s)	2461
GsuI	CTGGAG	1 cut(s)	766
HaeII	RGCGCY	1 cut(s)	2256
HaeIII	GGCC	3 cut(s)	847, 2311, 2348
HapII	CCGG	4 cut(s)	1949, 2473, 2500, 2532
HgaI	GACGC	2 cut(s)	908, 2249
HhaI	GCGC	2 cut(s)	2255, 2296
Hin1I	GRCGYC	1 cut(s)	919
Hin6I	GCGC	2 cut(s)	2253, 2294
HinP1I	GCGC	2 cut(s)	2253, 2294
HincII	GTYRAC	1 cut(s)	1996
HindII	GTYRAC	1 cut(s)	1996
HindIII	AAGCTT	1 cut(s)	2142
HpaII	CCGG	4 cut(s)	1949, 2473, 2500, 2532
HphI	GGTGA	7 cut(s)	275, 749, 1577, 1750, 1757, 2462, 2496
Hpy166II	GTNNAC	4 cut(s)	7, 107, 1996, 2306
Hpy188I	TCNGA	9 cut(s)	699, 975, 1153, 1285, 1726, 1871, 1902, 2059, 2077
Hpy8I	GTNNAC	4 cut(s)	7, 107, 1996, 2306
Hpy99I	CGWCG	4 cut(s)	1179, 1921, 2265, 2514
HpyCH4III	ACNGT	5 cut(s)	165, 307, 878, 1594, 1921
HpyCH4IV	ACGT	7 cut(s)	529, 1174, 1249, 1519, 2182, 2334, 2509
HpySE526I	ACGT	7 cut(s)	529, 1174, 1249, 1519, 2182, 2334, 2509
Hsp92I	GRCGYC	1 cut(s)	919
HspAI	GCGC	2 cut(s)	2253, 2294
KpnI	GGTACC	1 cut(s)	1237
Ksp22I	TGATCA	3 cut(s)	55, 1567, 1689
LmnI	GCTCC	4 cut(s)	97, 505, 650, 1096
Lsp1109I	GCAGC	9 cut(s)	665, 668, 2063, 2262, 2271, 2302, 2305, 2369, 2536
LweI	GCATC	9 cut(s)	104, 487, 1036, 1068, 1195, 1933, 2005, 2063, 2197
MaeI	CTAG	7 cut(s)	224, 248, 429, 980, 1383, 1557, 2213
MaeII	ACGT	7 cut(s)	529, 1174, 1249, 1519, 2182, 2334, 2509
MboII	GAAGA	7 cut(s)	506, 728, 1512, 2357, 2367, 2377, 2417
MfeI	CAATTG	2 cut(s)	33, 345
MflI	RGATCY	2 cut(s)	701, 1357
MhlI	GDGCHC	3 cut(s)	109, 682, 849
MluI	ACGCGT	1 cut(s)	2258
MlyI	GAGTC	8 cut(s)	142, 434, 1157, 1823, 1922, 2030, 2066, 2240
MmeI	TCCRAC	3 cut(s)	147, 274, 532
Mph1103I	ATGCAT	1 cut(s)	801
MroXI	GAANNNNTTC	2 cut(s)	405, 473
MseI	TTAA	4 cut(s)	200, 1158, 1376, 2199
MslI	CAYNNNNRTG	4 cut(s)	112, 288, 528, 2010
MspA1I	CMGCKG	2 cut(s)	80, 2549
MspI	CCGG	4 cut(s)	1949, 2473, 2500, 2532
MspR9I	CCNGG	7 cut(s)	27, 646, 1736, 2242, 2500, 2532, 2533
MunI	CAATTG	2 cut(s)	33, 345
Mva1269I	GAATGC	1 cut(s)	1306
MvaI	CCWGG	4 cut(s)	27, 646, 1736, 2242
MvnI	CGCG	4 cut(s)	484, 1110, 2260, 2296
NciI	CCSGG	3 cut(s)	2500, 2532, 2533
NdeI	CATATG	1 cut(s)	1686
NlaIV	GGNNCC	7 cut(s)	847, 1235, 1359, 1418, 1431, 1588, 2136
NmeAIII	GCCGAG	1 cut(s)	2374
NmuCI	GTSAC	5 cut(s)	1672, 1738, 2232, 2272, 2502
NsiI	ATGCAT	1 cut(s)	801
NspI	RCATGY	4 cut(s)	71, 1228, 2009, 2193
NspV	TTCGAA	1 cut(s)	1170
OliI	CACNNNNGTG	1 cut(s)	528
PagI	TCATGA	1 cut(s)	2395
PcsI	WCGNNNNNNNCGW	2 cut(s)	2264, 2331
PctI	GAATGC	1 cut(s)	1306
PdmI	GAANNNNTTC	2 cut(s)	405, 473
PfeI	GAWTC	8 cut(s)	208, 791, 890, 976, 1179, 1895, 2000, 2155
PflFI	GACNNNGTC	1 cut(s)	2278
PflMI	CCANNNNNTGG	4 cut(s)	38, 614, 1189, 2453
PfoI	TCCNGGA	1 cut(s)	25
PinAI	ACCGGT	1 cut(s)	2472
PkrI	GCNGC	9 cut(s)	655, 658, 2053, 2252, 2286, 2317, 2320, 2359, 2551
PleI	GAGTC	8 cut(s)	142, 433, 1156, 1823, 1922, 2030, 2066, 2239
PmaCI	CACGTG	2 cut(s)	530, 2183
PmlI	CACGTG	2 cut(s)	530, 2183
PpsI	GAGTC	8 cut(s)	142, 433, 1156, 1823, 1922, 2030, 2066, 2239
Ppu21I	YACGTR	3 cut(s)	530, 1250, 2183
PshAI	GACNNNNGTC	1 cut(s)	2040
Psp1406I	AACGTT	1 cut(s)	1519
Psp6I	CCWGG	4 cut(s)	25, 644, 1734, 2240
PspCI	CACGTG	2 cut(s)	530, 2183
PspEI	GGTNACC	1 cut(s)	2502
PspFI	CCCAGC	1 cut(s)	2457
PspGI	CCWGG	4 cut(s)	25, 644, 1734, 2240
PspN4I	GGNNCC	7 cut(s)	847, 1235, 1359, 1418, 1431, 1588, 2136
PspOMI	GGGCCC	1 cut(s)	845
PspPI	GGNCC	8 cut(s)	29, 845, 846, 1417, 1430, 1732, 2346, 2481
PstI	CTGCAG	1 cut(s)	2053
PstNI	CAGNNNCTG	2 cut(s)	2057, 2284
PsuI	RGATCY	2 cut(s)	701, 1357
PsyI	GACNNNGTC	1 cut(s)	2278
PvuII	CAGCTG	1 cut(s)	80
RsaI	GTAC	8 cut(s)	521, 559, 602, 674, 712, 1223, 1235, 1542
RsaNI	GTAC	8 cut(s)	520, 558, 601, 673, 711, 1222, 1234, 1541
RseI	CAYNNNNRTG	4 cut(s)	112, 288, 528, 2010
SaqAI	TTAA	4 cut(s)	200, 1158, 1376, 2199
SatI	GCNGC	9 cut(s)	654, 657, 2052, 2251, 2285, 2316, 2319, 2358, 2550
Sau96I	GGNCC	8 cut(s)	29, 845, 846, 1417, 1430, 1732, 2346, 2481
SchI	GAGTC	8 cut(s)	142, 434, 1157, 1823, 1922, 2030, 2066, 2240
ScrFI	CCNGG	7 cut(s)	27, 646, 1736, 2242, 2500, 2532, 2533
SduI	GDGCHC	3 cut(s)	109, 682, 849
SfaNI	GCATC	9 cut(s)	104, 487, 1036, 1068, 1195, 1933, 2005, 2063, 2197
SfcI	CTRYAG	1 cut(s)	2049
SfuI	TTCGAA	1 cut(s)	1170
SgrAI	CRCCGGYG	1 cut(s)	2472
SinI	GGWCC	5 cut(s)	29, 1417, 1430, 1732, 2481
SmaI	CCCGGG	1 cut(s)	2533
SmiMI	CAYNNNNRTG	4 cut(s)	112, 288, 528, 2010
SmlI	CTYRAG	1 cut(s)	2150
SmoI	CTYRAG	1 cut(s)	2150
SpeI	ACTAGT	1 cut(s)	247
SrfI	GCCCGGGC	1 cut(s)	2533
SsiI	CCGC	3 cut(s)	1110, 1525, 2547
SspI	AATATT	2 cut(s)	564, 766
SspMI	CTAG	7 cut(s)	224, 248, 429, 980, 1383, 1557, 2213
StyD4I	CCNGG	7 cut(s)	25, 644, 1734, 2240, 2498, 2530, 2531
StyI	CCWWGG	1 cut(s)	660
TaaI	ACNGT	5 cut(s)	165, 307, 878, 1594, 1921
TaiI	ACGT	7 cut(s)	532, 1177, 1252, 1522, 2185, 2337, 2512
TaqI	TCGA	6 cut(s)	138, 1170, 1177, 1606, 1716, 2107
TaqII	GACCGA	1 cut(s)	2498
TatI	WGTACW	4 cut(s)	557, 672, 1221, 1540
TfiI	GAWTC	8 cut(s)	208, 791, 890, 976, 1179, 1895, 2000, 2155
Tru1I	TTAA	4 cut(s)	200, 1158, 1376, 2199
Tru9I	TTAA	4 cut(s)	200, 1158, 1376, 2199
TscAI	CASTG	8 cut(s)	583, 746, 1558, 1681, 1699, 1765, 2101, 2308
TseFI	GTSAC	5 cut(s)	1672, 1738, 2232, 2272, 2502
TseI	GCWGC	9 cut(s)	653, 656, 2051, 2250, 2284, 2315, 2318, 2357, 2549
Tsp45I	GTSAC	5 cut(s)	1672, 1738, 2232, 2272, 2502
TspDTI	ATGAA	8 cut(s)	135, 1176, 1227, 1419, 1476, 1806, 1865, 2412
TspGWI	ACGGA	3 cut(s)	170, 1566, 2256
TspMI	CCCGGG	1 cut(s)	2531
TspRI	CASTG	8 cut(s)	583, 746, 1558, 1681, 1699, 1765, 2101, 2308
Tth111I	GACNNNGTC	1 cut(s)	2278
Van91I	CCANNNNNTGG	4 cut(s)	38, 614, 1189, 2453
VneI	GTGCAC	1 cut(s)	105
VpaK11BI	GGWCC	5 cut(s)	29, 1417, 1430, 1732, 2481
XapI	RAATTY	4 cut(s)	404, 1253, 1836, 1872
XbaI	TCTAGA	1 cut(s)	223
XceI	RCATGY	4 cut(s)	71, 1228, 2009, 2193
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2454
XmaI	CCCGGG	1 cut(s)	2531
XmiI	GTMKAC	1 cut(s)	6
XmnI	GAANNNNTTC	2 cut(s)	405, 473
XspI	CTAG	7 cut(s)	224, 248, 429, 980, 1383, 1557, 2213
Zsp2I	ATGCAT	1 cut(s)	801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.