Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom02g12890 |
| rosa_multiflora | Rmu_sc0011259.1_g000007 |
| rosa_rugosa | Rorug03G0130000.1 Rorug07G0003500 |
| rosa_samantha | Rh5BG567600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 182 |
| AgeI | ACCGGT | 1 cut(s) | 147 |
| AgsI | TTSAA | 1 cut(s) | 104 |
| AoxI | GGCC | 1 cut(s) | 300 |
| AsiGI | ACCGGT | 1 cut(s) | 147 |
| AspS9I | GGNCC | 1 cut(s) | 300 |
| AsuNHI | GCTAGC | 1 cut(s) | 293 |
| BauI | CACGAG | 1 cut(s) | 307 |
| BbsI | GAAGAC | 1 cut(s) | 150 |
| BccI | CCATC | 1 cut(s) | 55 |
| BceAI | ACGGC | 1 cut(s) | 287 |
| BciVI | GTATCC | 1 cut(s) | 256 |
| BfaI | CTAG | 1 cut(s) | 294 |
| BfuI | GTATCC | 1 cut(s) | 256 |
| BmgT120I | GGNCC | 1 cut(s) | 300 |
| BmtI | GCTAGC | 1 cut(s) | 297 |
| BpiI | GAAGAC | 1 cut(s) | 150 |
| BpmI | CTGGAG | 1 cut(s) | 32 |
| BsaWI | WCCGGW | 1 cut(s) | 147 |
| Bse118I | RCCGGY | 1 cut(s) | 147 |
| Bse1I | ACTGG | 1 cut(s) | 62 |
| BseGI | GGATG | 1 cut(s) | 66 |
| BseMII | CTCAG | 2 cut(s) | 116, 198 |
| BseNI | ACTGG | 1 cut(s) | 62 |
| BshFI | GGCC | 1 cut(s) | 302 |
| BshTI | ACCGGT | 1 cut(s) | 147 |
| BsiSI | CCGG | 1 cut(s) | 148 |
| BsnI | GGCC | 1 cut(s) | 302 |
| BspANI | GGCC | 1 cut(s) | 302 |
| BspCNI | CTCAG | 2 cut(s) | 117, 197 |
| BspOI | GCTAGC | 1 cut(s) | 297 |
| BsrFI | RCCGGY | 1 cut(s) | 147 |
| BsrI | ACTGG | 1 cut(s) | 62 |
| BssAI | RCCGGY | 1 cut(s) | 147 |
| BssSI | CACGAG | 1 cut(s) | 307 |
| Bst2BI | CACGAG | 1 cut(s) | 307 |
| Bst4CI | ACNGT | 1 cut(s) | 25 |
| Bst6I | CTCTTC | 2 cut(s) | 72, 185 |
| BstC8I | GCNNGC | 2 cut(s) | 291, 295 |
| BstDEI | CTNAG | 2 cut(s) | 125, 184 |
| BstF5I | GGATG | 1 cut(s) | 66 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 286, 299 |
| BstV2I | GAAGAC | 1 cut(s) | 150 |
| BsuI | GTATCC | 1 cut(s) | 256 |
| BsuRI | GGCC | 1 cut(s) | 302 |
| BtsCI | GGATG | 1 cut(s) | 66 |
| BtsIMutI | CAGTG | 1 cut(s) | 192 |
| Cac8I | GCNNGC | 2 cut(s) | 291, 295 |
| Cfr10I | RCCGGY | 1 cut(s) | 147 |
| Cfr13I | GGNCC | 1 cut(s) | 300 |
| Csp6I | GTAC | 1 cut(s) | 181 |
| CspAI | ACCGGT | 1 cut(s) | 147 |
| CviAII | CATG | 1 cut(s) | 203 |
| CviJI | RGCY | 4 cut(s) | 10, 29, 73, 302 |
| CviKI_1 | RGCY | 4 cut(s) | 10, 29, 73, 302 |
| CviQI | GTAC | 1 cut(s) | 181 |
| DdeI | CTNAG | 2 cut(s) | 125, 184 |
| Eam1104I | CTCTTC | 2 cut(s) | 72, 185 |
| EarI | CTCTTC | 2 cut(s) | 72, 185 |
| FaeI | CATG | 1 cut(s) | 206 |
| FaiI | YATR | 1 cut(s) | 204 |
| FatI | CATG | 1 cut(s) | 202 |
| FokI | GGATG | 1 cut(s) | 73 |
| FspBI | CTAG | 1 cut(s) | 294 |
| GsuI | CTGGAG | 1 cut(s) | 32 |
| HaeIII | GGCC | 1 cut(s) | 302 |
| HapII | CCGG | 1 cut(s) | 148 |
| Hin1II | CATG | 1 cut(s) | 206 |
| HinfI | GANTC | 1 cut(s) | 47 |
| HpaII | CCGG | 1 cut(s) | 148 |
| Hpy188I | TCNGA | 1 cut(s) | 126 |
| Hpy188III | TCNNGA | 2 cut(s) | 140, 309 |
| HpyAV | CCTTC | 1 cut(s) | 131 |
| HpyCH4III | ACNGT | 1 cut(s) | 25 |
| HpyCH4IV | ACGT | 2 cut(s) | 172, 245 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 286, 299 |
| HpyF3I | CTNAG | 2 cut(s) | 125, 184 |
| HpySE526I | ACGT | 2 cut(s) | 172, 245 |
| Hsp92II | CATG | 1 cut(s) | 206 |
| LpnPI | CCDG | 7 cut(s) | 43, 57, 59, 153, 161, 242, 283 |
| MaeI | CTAG | 1 cut(s) | 294 |
| MaeII | ACGT | 2 cut(s) | 172, 245 |
| MboII | GAAGA | 4 cut(s) | 79, 89, 155, 202 |
| MluCI | AATT | 1 cut(s) | 250 |
| MlyI | GAGTC | 1 cut(s) | 41 |
| MnlI | CCTC | 6 cut(s) | 7, 73, 91, 232, 241, 270 |
| MseI | TTAA | 1 cut(s) | 39 |
| MspI | CCGG | 1 cut(s) | 148 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 286, 299 |
| NheI | GCTAGC | 1 cut(s) | 293 |
| NlaIII | CATG | 1 cut(s) | 206 |
| PinAI | ACCGGT | 1 cut(s) | 147 |
| PleI | GAGTC | 1 cut(s) | 41 |
| PpsI | GAGTC | 1 cut(s) | 41 |
| PspPI | GGNCC | 1 cut(s) | 300 |
| RsaI | GTAC | 1 cut(s) | 182 |
| RsaNI | GTAC | 1 cut(s) | 181 |
| SaqAI | TTAA | 1 cut(s) | 39 |
| Sau96I | GGNCC | 1 cut(s) | 300 |
| SchI | GAGTC | 1 cut(s) | 41 |
| SetI | ASST | 4 cut(s) | 84, 102, 175, 248 |
| Sse9I | AATT | 1 cut(s) | 250 |
| SspMI | CTAG | 1 cut(s) | 294 |
| TaaI | ACNGT | 1 cut(s) | 25 |
| TaiI | ACGT | 2 cut(s) | 175, 248 |
| TasI | AATT | 1 cut(s) | 250 |
| TatI | WGTACW | 1 cut(s) | 180 |
| Tru1I | TTAA | 1 cut(s) | 39 |
| Tru9I | TTAA | 1 cut(s) | 39 |
| TscAI | CASTG | 1 cut(s) | 192 |
| TspRI | CASTG | 1 cut(s) | 192 |
| XspI | CTAG | 1 cut(s) | 294 |