ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom02g12890 |
| rosa_multiflora | Rmu_sc0011259.1_g000007 |
| rosa_rugosa | Rorug03G0130000.1 Rorug07G0003500 |
| rosa_samantha | Rh5BG567600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 94 |
| AcsI | RAATTY | 1 cut(s) | 205 |
| AgsI | TTSAA | 1 cut(s) | 367 |
| AluBI | AGCT | 2 cut(s) | 319, 380 |
| AluI | AGCT | 2 cut(s) | 319, 380 |
| Alw26I | GTCTC | 1 cut(s) | 269 |
| AlwI | GGATC | 1 cut(s) | 94 |
| ApoI | RAATTY | 1 cut(s) | 205 |
| AspS9I | GGNCC | 1 cut(s) | 301 |
| AvaII | GGWCC | 1 cut(s) | 301 |
| BcoDI | GTCTC | 1 cut(s) | 269 |
| BfaI | CTAG | 1 cut(s) | 221 |
| Bme18I | GGWCC | 1 cut(s) | 301 |
| BmgT120I | GGNCC | 1 cut(s) | 301 |
| BmrI | ACTGGG | 1 cut(s) | 139 |
| BmuI | ACTGGG | 1 cut(s) | 139 |
| BoxI | GACNNNNGTC | 1 cut(s) | 281 |
| Bse1I | ACTGG | 2 cut(s) | 134, 217 |
| Bse3DI | GCAATG | 1 cut(s) | 399 |
| BseMI | GCAATG | 1 cut(s) | 399 |
| BseMII | CTCAG | 1 cut(s) | 110 |
| BseNI | ACTGG | 2 cut(s) | 134, 217 |
| BseRI | GAGGAG | 1 cut(s) | 359 |
| BseYI | CCCAGC | 1 cut(s) | 376 |
| BsmAI | GTCTC | 1 cut(s) | 269 |
| Bsp143I | GATC | 2 cut(s) | 99, 194 |
| BspCNI | CTCAG | 1 cut(s) | 109 |
| BspPI | GGATC | 1 cut(s) | 94 |
| BsrDI | GCAATG | 1 cut(s) | 399 |
| BsrI | ACTGG | 2 cut(s) | 134, 217 |
| BssMI | GATC | 2 cut(s) | 99, 194 |
| Bst4CI | ACNGT | 1 cut(s) | 7 |
| BstC8I | GCNNGC | 1 cut(s) | 120 |
| BstDEI | CTNAG | 2 cut(s) | 96, 107 |
| BstKTI | GATC | 2 cut(s) | 102, 197 |
| BstMAI | GTCTC | 1 cut(s) | 269 |
| BstMBI | GATC | 2 cut(s) | 99, 194 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 281 |
| BstX2I | RGATCY | 1 cut(s) | 99 |
| BstYI | RGATCY | 1 cut(s) | 99 |
| BtsIMutI | CAGTG | 1 cut(s) | 406 |
| Cac8I | GCNNGC | 1 cut(s) | 120 |
| Cfr13I | GGNCC | 1 cut(s) | 301 |
| CviJI | RGCY | 3 cut(s) | 319, 375, 380 |
| CviKI_1 | RGCY | 3 cut(s) | 319, 375, 380 |
| DdeI | CTNAG | 2 cut(s) | 96, 107 |
| DpnI | GATC | 2 cut(s) | 101, 196 |
| DpnII | GATC | 2 cut(s) | 99, 194 |
| DraI | TTTAAA | 1 cut(s) | 204 |
| Eco32I | GATATC | 1 cut(s) | 262 |
| Eco47I | GGWCC | 1 cut(s) | 301 |
| EcoRV | GATATC | 1 cut(s) | 262 |
| FaiI | YATR | 4 cut(s) | 113, 139, 322, 331 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 273, 305 |
| FspBI | CTAG | 1 cut(s) | 221 |
| GsaI | CCCAGC | 1 cut(s) | 380 |
| HincII | GTYRAC | 1 cut(s) | 45 |
| HindII | GTYRAC | 1 cut(s) | 45 |
| Hpy166II | GTNNAC | 1 cut(s) | 45 |
| Hpy188I | TCNGA | 1 cut(s) | 99 |
| Hpy188III | TCNNGA | 1 cut(s) | 172 |
| Hpy8I | GTNNAC | 1 cut(s) | 45 |
| HpyCH4III | ACNGT | 1 cut(s) | 7 |
| HpyF3I | CTNAG | 2 cut(s) | 96, 107 |
| Kzo9I | GATC | 2 cut(s) | 99, 194 |
| LpnPI | CCDG | 5 cut(s) | 58, 104, 115, 198, 390 |
| MaeI | CTAG | 1 cut(s) | 221 |
| MaeIII | GTNAC | 1 cut(s) | 158 |
| MalI | GATC | 2 cut(s) | 101, 196 |
| MboI | GATC | 2 cut(s) | 99, 194 |
| MflI | RGATCY | 1 cut(s) | 99 |
| MluCI | AATT | 2 cut(s) | 62, 205 |
| MmeI | TCCRAC | 1 cut(s) | 328 |
| MnlI | CCTC | 4 cut(s) | 70, 114, 259, 337 |
| MseI | TTAA | 2 cut(s) | 21, 203 |
| NdeII | GATC | 2 cut(s) | 99, 194 |
| PshAI | GACNNNNGTC | 1 cut(s) | 281 |
| PspFI | CCCAGC | 1 cut(s) | 376 |
| PspPI | GGNCC | 1 cut(s) | 301 |
| PsuI | RGATCY | 1 cut(s) | 99 |
| SaqAI | TTAA | 2 cut(s) | 21, 203 |
| Sau3AI | GATC | 2 cut(s) | 99, 194 |
| Sau96I | GGNCC | 1 cut(s) | 301 |
| SetI | ASST | 5 cut(s) | 18, 160, 303, 321, 382 |
| SinI | GGWCC | 1 cut(s) | 301 |
| Sse9I | AATT | 2 cut(s) | 62, 205 |
| SspMI | CTAG | 1 cut(s) | 221 |
| TaaI | ACNGT | 1 cut(s) | 7 |
| TaqI | TCGA | 2 cut(s) | 193, 360 |
| TasI | AATT | 2 cut(s) | 62, 205 |
| Tru1I | TTAA | 2 cut(s) | 21, 203 |
| Tru9I | TTAA | 2 cut(s) | 21, 203 |
| VpaK11BI | GGWCC | 1 cut(s) | 301 |
| XapI | RAATTY | 1 cut(s) | 205 |
| XspI | CTAG | 1 cut(s) | 221 |