Rmu_sc0011374.1_g000003

Epidermal growth factor receptor substrate 15-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011374.1
OG0022425
Physical Location & Seq
Forward (+)
19667 .. 20638
972 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011374.1_g000003.1.cds

Sequence Viewer

Length: 855 bp
atggtggtgatggtgaaaagcaggtcggatacggatcatgacggtaatagagataactactattatggtgggtctggagagtttggcctcaaccctatcaagactgggtcatcccaaactagtagcttttcccagaagagccgcccatttacttttgatgattctgttcctagcactccactcaattcaggatactctccaccaaggttcaaagatagtttagaaccctcatttgacagcttttccaggtttgattccttcagatcacatgatagtggatttttccctcaagaaaagtttggaagatttgattctatgcgcagcagtagagacttcgatcagggtcatgggttcccatcatttgatgacatcccagatccatttgggtcttcagcaccatttaggacatcactggatggtgaaactccaagaagggactcggacccttttggttcttcctcgtcatttaggatatcatttgacagtcaaactccaagaagagactcagacccttatgggtcttcaggtccatttaggacatcatttgacagtcaaactccaggaagagactcggaccgttttggttcttcagcgtcatttaggacatcattcgatggtcaaactccaagaagagattcagacccttatgggtcttcagctccatttaggtcgtcattcgacagtactccaagagcagactctgacccttatggatcttcagctccattcaggacatcatttgacggtcaaagttcaagaagagattcggacccttttgggtccacagggccttttaagctatcgatggagagtcagactccgagaagagactccgataattggagtgcattttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EF-hand_4 EF-hand_5

Protein Analysis

284

Amino Acids

31.53

Weight (kDa)

5.05

Isoelectric Point (pI)

69.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0022425)

Species Orthologous Gene IDs
malus_domestica MD05G1136400.v1.1 MD05G1136500.v1.1
pyrus_communis pycom05g13250
rosa_multiflora Rmu_sc0011374.1_g000003

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 320
Acc36I ACCTGC 1 cut(s) 12
AciI CCGC 1 cut(s) 142
AclWI GGATC 3 cut(s) 42, 371, 721
AcuI CTGAAG 6 cut(s) 244, 375, 507, 573, 639, 702
AfaI GTAC 1 cut(s) 685
AfiI CCNNNNNNNGG 1 cut(s) 840
AgsI TTSAA 2 cut(s) 211, 756
AhlI ACTAGT 1 cut(s) 119
AjnI CCWGG 2 cut(s) 245, 559
AjuI GAANNNNNNNTTGG 2 cut(s) 619, 651
AluBI AGCT 5 cut(s) 126, 240, 659, 722, 799
AluI AGCT 5 cut(s) 126, 240, 659, 722, 799
Alw26I GTCTC 4 cut(s) 324, 495, 561, 822
AlwI GGATC 3 cut(s) 42, 371, 721
AlwNI CAGNNNCTG 1 cut(s) 701
AoxI GGCC 2 cut(s) 85, 788
ApeKI GCWGC 1 cut(s) 321
Asp700I GAANNNNTTC 2 cut(s) 634, 763
AspLEI GCGC 1 cut(s) 321
AspS9I GGNCC 6 cut(s) 442, 527, 574, 769, 780, 788
AsuHPI GGTGA 3 cut(s) 19, 25, 431
AvaII GGWCC 5 cut(s) 442, 527, 574, 769, 780
BbsI GAAGAC 3 cut(s) 381, 513, 645
BbvI GCAGC 1 cut(s) 333
BccI CCATC 5 cut(s) 4, 364, 410, 608, 799
BciT130I CCWGG 2 cut(s) 247, 561
BciVI GTATCC 2 cut(s) 22, 185
BcoDI GTCTC 4 cut(s) 324, 495, 561, 822
BcuI ACTAGT 1 cut(s) 119
BfaI CTAG 2 cut(s) 120, 171
BfuAI ACCTGC 1 cut(s) 12
BfuI GTATCC 2 cut(s) 22, 185
BisI GCNGC 2 cut(s) 142, 322
BlsI GCNGC 2 cut(s) 143, 323
BmcAI AGTACT 1 cut(s) 685
Bme1390I CCNGG 2 cut(s) 247, 561
Bme18I GGWCC 5 cut(s) 442, 527, 574, 769, 780
BmgT120I GGNCC 6 cut(s) 442, 527, 574, 769, 780, 788
BmiI GGNNCC 4 cut(s) 353, 444, 771, 781
BmrFI CCNGG 2 cut(s) 247, 561
BmrI ACTGGG 1 cut(s) 114
BmuI ACTGGG 1 cut(s) 114
BpiI GAAGAC 3 cut(s) 381, 513, 645
BplI GAGNNNNNCTC 2 cut(s) 802, 834
BpmI CTGGAG 2 cut(s) 96, 543
BpuEI CTTGAG 1 cut(s) 273
Bsa29I ATCGAT 1 cut(s) 803
BsaBI GATNNNNATC 1 cut(s) 33
BsaJI CCNNGG 1 cut(s) 203
Bsc4I CCNNNNNNNGG 1 cut(s) 840
Bse1I ACTGG 2 cut(s) 109, 417
Bse8I GATNNNNATC 1 cut(s) 33
BseBI CCWGG 2 cut(s) 247, 561
BseCI ATCGAT 1 cut(s) 803
BseDI CCNNGG 1 cut(s) 203
BseGI GGATG 3 cut(s) 110, 369, 421
BseJI GATNNNNATC 1 cut(s) 33
BseLI CCNNNNNNNGG 1 cut(s) 840
BseMII CTCAG 1 cut(s) 519
BseNI ACTGG 2 cut(s) 109, 417
BseXI GCAGC 1 cut(s) 333
BshFI GGCC 2 cut(s) 87, 790
BshVI ATCGAT 1 cut(s) 803
BslFI GGGAC 1 cut(s) 449
BslI CCNNNNNNNGG 1 cut(s) 840
BsmAI GTCTC 4 cut(s) 324, 495, 561, 822
BsmFI GGGAC 1 cut(s) 449
BsnI GGCC 2 cut(s) 87, 790
Bsp143I GATC 5 cut(s) 34, 263, 337, 376, 713
BspACI CCGC 1 cut(s) 142
BspANI GGCC 2 cut(s) 87, 790
BspCNI CTCAG 1 cut(s) 518
BspDI ATCGAT 1 cut(s) 803
BspHI TCATGA 1 cut(s) 37
BspLI GGNNCC 4 cut(s) 353, 444, 771, 781
BspMI ACCTGC 1 cut(s) 12
BspPI GGATC 3 cut(s) 42, 371, 721
BspQI GCTCTTC 1 cut(s) 131
BsrI ACTGG 2 cut(s) 109, 417
BssECI CCNNGG 1 cut(s) 203
BssMI GATC 5 cut(s) 34, 263, 337, 376, 713
BssT1I CCWWGG 1 cut(s) 203
Bst2UI CCWGG 2 cut(s) 247, 561
Bst4CI ACNGT 6 cut(s) 44, 485, 551, 578, 683, 746
Bst6I CTCTTC 6 cut(s) 131, 493, 559, 625, 754, 820
BstDEI CTNAG 1 cut(s) 505
BstF5I GGATG 3 cut(s) 110, 369, 421
BstHHI GCGC 1 cut(s) 321
BstKTI GATC 5 cut(s) 37, 266, 340, 379, 716
BstMAI GTCTC 4 cut(s) 324, 495, 561, 822
BstMBI GATC 5 cut(s) 34, 263, 337, 376, 713
BstMWI GCNNNNNNNGC 1 cut(s) 796
BstNI CCWGG 2 cut(s) 247, 561
BstSCI CCNGG 2 cut(s) 245, 559
BstV1I GCAGC 1 cut(s) 333
BstV2I GAAGAC 3 cut(s) 381, 513, 645
BstX2I RGATCY 2 cut(s) 376, 713
BstYI RGATCY 2 cut(s) 376, 713
Bsu15I ATCGAT 1 cut(s) 803
BsuI GTATCC 2 cut(s) 22, 185
BsuRI GGCC 2 cut(s) 87, 790
BsuTUI ATCGAT 1 cut(s) 803
BtsCI GGATG 3 cut(s) 110, 369, 421
BtsIMutI CAGTG 1 cut(s) 410
BveI ACCTGC 1 cut(s) 12
CaiI CAGNNNCTG 1 cut(s) 701
CciI TCATGA 1 cut(s) 37
CfoI GCGC 1 cut(s) 321
Cfr13I GGNCC 6 cut(s) 442, 527, 574, 769, 780, 788
ClaI ATCGAT 1 cut(s) 803
CpoI CGGWCCG 1 cut(s) 574
CseI GACGC 1 cut(s) 582
Csp6I GTAC 1 cut(s) 684
CspI CGGWCCG 1 cut(s) 574
CviAII CATG 3 cut(s) 38, 269, 347
CviJI RGCY 8 cut(s) 87, 126, 141, 240, 659, 722, 790, 799
CviKI_1 RGCY 8 cut(s) 87, 126, 141, 240, 659, 722, 790, 799
CviQI GTAC 1 cut(s) 684
DdeI CTNAG 1 cut(s) 505
DpnI GATC 5 cut(s) 36, 265, 339, 378, 715
DpnII GATC 5 cut(s) 34, 263, 337, 376, 713
Eam1104I CTCTTC 6 cut(s) 131, 493, 559, 625, 754, 820
EarI CTCTTC 6 cut(s) 131, 493, 559, 625, 754, 820
Eco130I CCWWGG 1 cut(s) 203
Eco32I GATATC 1 cut(s) 474
Eco47I GGWCC 5 cut(s) 442, 527, 574, 769, 780
Eco57I CTGAAG 6 cut(s) 244, 375, 507, 573, 639, 702
EcoO109I RGGNCCY 1 cut(s) 788
EcoRII CCWGG 2 cut(s) 245, 559
EcoRV GATATC 1 cut(s) 474
EcoT14I CCWWGG 1 cut(s) 203
ErhI CCWWGG 1 cut(s) 203
FaeI CATG 3 cut(s) 41, 272, 350
FaiI YATR 8 cut(s) 39, 66, 270, 317, 348, 516, 648, 711
FaqI GGGAC 1 cut(s) 449
FatI CATG 3 cut(s) 37, 268, 346
Fnu4HI GCNGC 2 cut(s) 142, 322
FokI GGATG 3 cut(s) 97, 356, 428
Fsp4HI GCNGC 2 cut(s) 142, 322
FspBI CTAG 2 cut(s) 120, 171
FspI TGCGCA 1 cut(s) 320
GlaI GCGC 1 cut(s) 320
GluI GCNGC 2 cut(s) 142, 322
GsuI CTGGAG 2 cut(s) 96, 543
HaeIII GGCC 2 cut(s) 87, 790
HgaI GACGC 1 cut(s) 582
HhaI GCGC 1 cut(s) 321
Hin1II CATG 3 cut(s) 41, 272, 350
Hin6I GCGC 1 cut(s) 319
HinP1I GCGC 1 cut(s) 319
HphI GGTGA 3 cut(s) 19, 25, 431
Hpy166II GTNNAC 1 cut(s) 783
Hpy188III TCNNGA 7 cut(s) 38, 75, 100, 189, 290, 730, 756
Hpy8I GTNNAC 1 cut(s) 783
HpyAV CCTTC 2 cut(s) 268, 426
HpyCH4III ACNGT 6 cut(s) 44, 485, 551, 578, 683, 746
HpyCH4V TGCA 1 cut(s) 848
HpyF10VI GCNNNNNNNGC 1 cut(s) 796
HpyF3I CTNAG 1 cut(s) 505
Hsp92II CATG 3 cut(s) 41, 272, 350
HspAI GCGC 1 cut(s) 319
Kzo9I GATC 5 cut(s) 34, 263, 337, 376, 713
LguI GCTCTTC 1 cut(s) 131
LmnI GCTCC 2 cut(s) 664, 727
Lsp1109I GCAGC 1 cut(s) 333
MaeI CTAG 2 cut(s) 120, 171
MalI GATC 5 cut(s) 36, 265, 339, 378, 715
MboI GATC 5 cut(s) 34, 263, 337, 376, 713
MflI RGATCY 2 cut(s) 376, 713
MluCI AATT 2 cut(s) 184, 838
MlyI GAGTC 7 cut(s) 431, 497, 563, 692, 811, 820, 824
MmeI TCCRAC 1 cut(s) 6
MnlI CCTC 4 cut(s) 98, 238, 297, 469
MroXI GAANNNNTTC 2 cut(s) 634, 763
MseI TTAA 1 cut(s) 795
MslI CAYNNNNRTG 1 cut(s) 273
MspR9I CCNGG 2 cut(s) 247, 561
MvaI CCWGG 2 cut(s) 247, 561
MwoI GCNNNNNNNGC 1 cut(s) 796
NdeII GATC 5 cut(s) 34, 263, 337, 376, 713
NlaIII CATG 3 cut(s) 41, 272, 350
NlaIV GGNNCC 4 cut(s) 353, 444, 771, 781
NsbI TGCGCA 1 cut(s) 320
PagI TCATGA 1 cut(s) 37
PciSI GCTCTTC 1 cut(s) 131
PdmI GAANNNNTTC 2 cut(s) 634, 763
PfeI GAWTC 5 cut(s) 161, 254, 311, 635, 764
PflFI GACNNNGTC 1 cut(s) 106
PfoI TCCNGGA 1 cut(s) 559
PkrI GCNGC 2 cut(s) 143, 323
PleI GAGTC 7 cut(s) 431, 497, 563, 692, 811, 819, 824
PpsI GAGTC 7 cut(s) 431, 497, 563, 692, 811, 819, 824
Psp6I CCWGG 2 cut(s) 245, 559
PspGI CCWGG 2 cut(s) 245, 559
PspN4I GGNNCC 4 cut(s) 353, 444, 771, 781
PspPI GGNCC 6 cut(s) 442, 527, 574, 769, 780, 788
PstNI CAGNNNCTG 1 cut(s) 701
PsuI RGATCY 2 cut(s) 376, 713
PsyI GACNNNGTC 1 cut(s) 106
RsaI GTAC 1 cut(s) 685
RsaNI GTAC 1 cut(s) 684
RseI CAYNNNNRTG 1 cut(s) 273
Rsr2I CGGWCCG 1 cut(s) 574
RsrII CGGWCCG 1 cut(s) 574
SapI GCTCTTC 1 cut(s) 131
SaqAI TTAA 1 cut(s) 795
SatI GCNGC 2 cut(s) 142, 322
Sau3AI GATC 5 cut(s) 34, 263, 337, 376, 713
Sau96I GGNCC 6 cut(s) 442, 527, 574, 769, 780, 788
ScaI AGTACT 1 cut(s) 685
SchI GAGTC 7 cut(s) 431, 497, 563, 692, 811, 820, 824
ScrFI CCNGG 2 cut(s) 247, 561
SinI GGWCC 5 cut(s) 442, 527, 574, 769, 780
SmiMI CAYNNNNRTG 1 cut(s) 273
SmlI CTYRAG 1 cut(s) 288
SmoI CTYRAG 1 cut(s) 288
SpeI ACTAGT 1 cut(s) 119
Sse9I AATT 2 cut(s) 184, 838
SsiI CCGC 1 cut(s) 142
SspMI CTAG 2 cut(s) 120, 171
StyD4I CCNGG 2 cut(s) 245, 559
StyI CCWWGG 1 cut(s) 203
TaaI ACNGT 6 cut(s) 44, 485, 551, 578, 683, 746
TaqI TCGA 4 cut(s) 336, 612, 678, 803
TasI AATT 2 cut(s) 184, 838
TatI WGTACW 1 cut(s) 683
TauI GCSGC 1 cut(s) 144
TfiI GAWTC 5 cut(s) 161, 254, 311, 635, 764
Tru1I TTAA 1 cut(s) 795
Tru9I TTAA 1 cut(s) 795
TscAI CASTG 1 cut(s) 417
TseI GCWGC 1 cut(s) 321
TspGWI ACGGA 1 cut(s) 47
TspRI CASTG 1 cut(s) 417
Tth111I GACNNNGTC 1 cut(s) 106
VpaK11BI GGWCC 5 cut(s) 442, 527, 574, 769, 780
XmnI GAANNNNTTC 2 cut(s) 634, 763
XspI CTAG 2 cut(s) 120, 171
ZrmI AGTACT 1 cut(s) 685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.