Rmu_sc0013078.1_g000006

Belongs to the aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013078.1
Physical Location & Seq
Forward (+)
14811 .. 18565
3755 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013078.1_g000006.1.cds

Sequence Viewer

Length: 1620 bp
atggatgaccttgttccttcccgtcagctcttcatcgccggtgaatggagagaaccagttctgaagaaacggatcccaatcgtgaaccctgctactgaagatattgttggggacttaccagctgctactgctgaagatgtggatattgcagtggatgcagctcgcatggctttcttcagtaataaagggaaggattgggcctctgcttctggtgcttatcgtgctaagtttcttcgtgccatcgctgacatgatcttggagaggaagtctctactggccaaactggaaaccattgatactgggaagccactagatgaagcagtatctgatatggaaagttctgcttcctgtttcaagtattatgcagaacttgcagaagcattggatttgaaggaaaggactcctgtctctataaagcagcaatcatttaagacccatgtccttaaggaacccattggagttgttgccctcattactccttggaactaccctcttttgatggctgtctggaaggtcgctcctgctctggctgccggatgtaccgctatacttaagccatctgagttggcatctgtgacgtgtttggagttggctgacatttgcagacaggtgggtctgccttctggtgtccttaatgtcgttactgggttaggctcagaagttggtgcccctttgtcatctcatcctcatgtcgacaagatagcatttactggaagtacagcaaccggaatcaaggtcatgacagctgcagctcaaactatcaagcctgtatcattggaacttggcgggaagagtccaattcttgtgtttcaggatgcagacctcgataatggctattggttgtcttttgacttgtatagtgatgccttgcagcctgtatcattggaacttggcgggaagagtccaattcttgtgtttcaggatgcagacctcgataatgctgcagaatggactatctatggctgctttgcgacaagtggccaaatctgtagtgcaacatctcgtcttcttgttcatgaaagcattgcagccaaattcttagaaaagcttattgactggagtaagaacatcaaaatctctgatcccatggaagaaggttgcaggcttggttccgtaataagtaaaacacagtacgagaagatattgaattttattactacagcaaaaggtgaaggtgcaaccattctacacggaggtggccgtcctcaacatctgaatcaaggatttttcattgaaccaacaatcattacagatgttggcacctcaatgacaatatggaaggaggaggtttttggacctgttttatgtgtcaaaacatttactacagaagatgaagccctggaactagcaaatgatactgattatggtttgggagctgcagtgatttctaaggatccagaaaggtgtgaacgcttcgccaaggctattcagtcaggggttgtatggaaaaactgctcacaaccctgctttaatgaagccccttggggaggcaaaaagctcagcggaattgggcgcgagttaggagaatggggtctggaaaactacttgagcataaagcaggtgactgagtacacctctgatgagccatacgggtggtattcccctcccaagaagcagtga

Protein Analysis

539

Amino Acids

58.52

Weight (kDa)

5.0

Isoelectric Point (pI)

28.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017082)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74920 AT1G74920
prunus_persica Prupe.3G277000_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0170111
rosa_laevigata RLG00000021922
rosa_multiflora Rmu_sc0013078.1_g000006
rosa_roxburghii Rroxscaffold_2G00081580
rosa_rugosa Rorug02G0545800.1
rosa_samantha Rh2AG617900 Rh2BG629400 Rh2CG598800 Rh2DG641200
rosa_wichuraiana Rw2G051160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1549
AasI GACNNNNNNGTC 1 cut(s) 612
Acc36I ACCTGC 1 cut(s) 1549
AccB1I GGYRCC 2 cut(s) 665, 1259
AccI GTMKAC 1 cut(s) 693
AccII CGCG 1 cut(s) 1515
AciI CCGC 4 cut(s) 543, 786, 894, 1503
AclWI GGATC 5 cut(s) 67, 80, 1076, 1388, 1401
AcoI YGGCCR 3 cut(s) 276, 979, 1198
AcsI RAATTY 2 cut(s) 1034, 1147
AcuI CTGAAG 4 cut(s) 83, 117, 153, 160
AfaI GTAC 4 cut(s) 541, 718, 1133, 1571
AfiI CCNNNNNNNGG 2 cut(s) 45, 1487
AflII CTTAAG 2 cut(s) 443, 551
AflIII ACRYGT 1 cut(s) 578
AgsI TTSAA 4 cut(s) 355, 391, 1147, 1235
AjiI CACGTC 1 cut(s) 579
AjnI CCWGG 1 cut(s) 1338
AjuI GAANNNNNNNTTGG 2 cut(s) 90, 122
AleI CACNNNNGTG 1 cut(s) 1194
AluBI AGCT 8 cut(s) 28, 122, 161, 746, 752, 1048, 1376, 1498
AluI AGCT 8 cut(s) 28, 122, 161, 746, 752, 1048, 1376, 1498
Alw26I GTCTC 2 cut(s) 273, 412
AlwI GGATC 5 cut(s) 67, 80, 1076, 1388, 1401
AlwNI CAGNNNCTG 1 cut(s) 326
AoxI GGCC 4 cut(s) 198, 276, 979, 1198
ApoI RAATTY 2 cut(s) 1034, 1147
Asp700I GAANNNNTTC 1 cut(s) 57
AspLEI GCGC 1 cut(s) 1515
AspS9I GGNCC 2 cut(s) 198, 1295
AsuHPI GGTGA 3 cut(s) 53, 1181, 1573
AvaII GGWCC 1 cut(s) 1295
BaeGI GKGCMC 1 cut(s) 670
BalI TGGCCA 2 cut(s) 278, 981
BamHI GGATCC 2 cut(s) 72, 1393
BanI GGYRCC 2 cut(s) 665, 1259
BbsI GAAGAC 1 cut(s) 998
BccI CCATC 3 cut(s) 248, 493, 565
BceAI ACGGC 1 cut(s) 1185
BcgI CGANNNNNNTGC 2 cut(s) 923, 957
BciT130I CCWGG 1 cut(s) 1340
BcoDI GTCTC 2 cut(s) 273, 412
BfaI CTAG 2 cut(s) 311, 1346
BfmI CTRYAG 6 cut(s) 747, 942, 988, 1158, 1323, 1377
BfrI CTTAAG 2 cut(s) 443, 551
BfuAI ACCTGC 1 cut(s) 1549
BlpI GCTNAGC 1 cut(s) 1499
Bme1390I CCNGG 1 cut(s) 1340
Bme18I GGWCC 1 cut(s) 1295
BmgBI CACGTC 1 cut(s) 579
BmgT120I GGNCC 2 cut(s) 198, 1295
BmiI GGNNCC 6 cut(s) 74, 450, 667, 1111, 1261, 1395
BmrFI CCNGG 1 cut(s) 1340
BmrI ACTGGG 2 cut(s) 309, 654
BmsI GCATC 5 cut(s) 145, 578, 805, 853, 913
BmuI ACTGGG 2 cut(s) 309, 654
BoxI GACNNNNGTC 2 cut(s) 404, 437
BpiI GAAGAC 1 cut(s) 998
BplI GAGNNNNNCTC 4 cut(s) 253, 285, 1559, 1591
BpmI CTGGAG 1 cut(s) 1078
Bpu1102I GCTNAGC 1 cut(s) 1499
BpuEI CTTGAG 1 cut(s) 1567
BsaBI GATNNNNATC 1 cut(s) 77
BsaJI CCNNGG 5 cut(s) 479, 1086, 1338, 1419, 1481
BsaWI WCCGGW 1 cut(s) 725
BsaXI ACNNNNNCTCC 4 cut(s) 251, 281, 1365, 1395
Bsc4I CCNNNNNNNGG 2 cut(s) 45, 1487
Bse118I RCCGGY 1 cut(s) 38
Bse1I ACTGG 7 cut(s) 56, 279, 288, 304, 649, 715, 1061
Bse3DI GCAATG 1 cut(s) 1023
Bse8I GATNNNNATC 1 cut(s) 77
BseBI CCWGG 1 cut(s) 1340
BseDI CCNNGG 5 cut(s) 479, 1086, 1338, 1419, 1481
BseGI GGATG 6 cut(s) 10, 160, 542, 682, 820, 928
BseJI GATNNNNATC 1 cut(s) 77
BseLI CCNNNNNNNGG 2 cut(s) 45, 1487
BseMI GCAATG 1 cut(s) 1023
BseMII CTCAG 4 cut(s) 552, 669, 1513, 1557
BseNI ACTGG 7 cut(s) 56, 279, 288, 304, 649, 715, 1061
BseRI GAGGAG 1 cut(s) 1298
BseSI GKGCMC 1 cut(s) 670
Bsh1236I CGCG 1 cut(s) 1515
BshFI GGCC 4 cut(s) 200, 278, 981, 1200
BshNI GGYRCC 2 cut(s) 665, 1259
BsiSI CCGG 3 cut(s) 39, 534, 726
BslFI GGGAC 1 cut(s) 125
BslI CCNNNNNNNGG 2 cut(s) 45, 1487
BsmAI GTCTC 2 cut(s) 273, 412
BsmFI GGGAC 1 cut(s) 125
BsnI GGCC 4 cut(s) 200, 278, 981, 1200
Bsp1286I GDGCHC 1 cut(s) 670
Bsp143I GATC 4 cut(s) 72, 252, 1081, 1393
Bsp1720I GCTNAGC 1 cut(s) 1499
Bsp19I CCATGG 1 cut(s) 1086
BspACI CCGC 4 cut(s) 543, 786, 894, 1503
BspANI GGCC 4 cut(s) 200, 278, 981, 1200
BspCNI CTCAG 4 cut(s) 553, 668, 1512, 1558
BspFNI CGCG 1 cut(s) 1515
BspHI TCATGA 2 cut(s) 738, 1015
BspLI GGNNCC 6 cut(s) 74, 450, 667, 1111, 1261, 1395
BspMAI CTGCAG 3 cut(s) 751, 946, 1381
BspMI ACCTGC 1 cut(s) 1549
BspPI GGATC 5 cut(s) 67, 80, 1076, 1388, 1401
BspQI GCTCTTC 1 cut(s) 35
BspT107I GGYRCC 2 cut(s) 665, 1259
BspTI CTTAAG 2 cut(s) 443, 551
BsrDI GCAATG 1 cut(s) 1023
BsrFI RCCGGY 1 cut(s) 38
BsrI ACTGG 7 cut(s) 56, 279, 288, 304, 649, 715, 1061
BssAI RCCGGY 1 cut(s) 38
BssECI CCNNGG 5 cut(s) 479, 1086, 1338, 1419, 1481
BssMI GATC 4 cut(s) 72, 252, 1081, 1393
BssT1I CCWWGG 4 cut(s) 479, 1086, 1419, 1481
Bst2UI CCWGG 1 cut(s) 1340
Bst4CI ACNGT 1 cut(s) 1131
Bst6I CTCTTC 3 cut(s) 35, 785, 893
BstAFI CTTAAG 2 cut(s) 443, 551
BstAPI GCANNNNNTGC 2 cut(s) 155, 371
BstC8I GCNNGC 2 cut(s) 163, 1103
BstDEI CTNAG 7 cut(s) 225, 561, 655, 1039, 1389, 1499, 1566
BstDSI CCRYGG 1 cut(s) 1086
BstENI CCTNNNNNAGG 1 cut(s) 1485
BstF5I GGATG 6 cut(s) 10, 160, 542, 682, 820, 928
BstFNI CGCG 1 cut(s) 1515
BstHHI GCGC 1 cut(s) 1515
BstKTI GATC 4 cut(s) 75, 255, 1084, 1396
BstMAI GTCTC 2 cut(s) 273, 412
BstMBI GATC 4 cut(s) 72, 252, 1081, 1393
BstMWI GCNNNNNNNGC 7 cut(s) 128, 155, 167, 212, 221, 371, 530
BstNI CCWGG 1 cut(s) 1340
BstPAI GACNNNNGTC 2 cut(s) 404, 437
BstSCI CCNGG 1 cut(s) 1338
BstSFI CTRYAG 6 cut(s) 747, 942, 988, 1158, 1323, 1377
BstSLI GKGCMC 1 cut(s) 670
BstUI CGCG 1 cut(s) 1515
BstV2I GAAGAC 1 cut(s) 998
BstX2I RGATCY 2 cut(s) 72, 1393
BstXI CCANNNNNNTGG 1 cut(s) 1593
BstYI RGATCY 2 cut(s) 72, 1393
BsuRI GGCC 4 cut(s) 200, 278, 981, 1200
BtgI CCRYGG 1 cut(s) 1086
BtgZI GCGATG 2 cut(s) 19, 226
BtrI CACGTC 1 cut(s) 579
BtsCI GGATG 6 cut(s) 10, 160, 542, 682, 820, 928
BtsI GCAGTG 2 cut(s) 156, 1386
BtsIMutI CAGTG 2 cut(s) 156, 1386
BveI ACCTGC 1 cut(s) 1549
Cac8I GCNNGC 2 cut(s) 163, 1103
CaiI CAGNNNCTG 1 cut(s) 326
CciI TCATGA 2 cut(s) 738, 1015
CfoI GCGC 1 cut(s) 1515
Cfr10I RCCGGY 1 cut(s) 38
Cfr13I GGNCC 2 cut(s) 198, 1295
Csp6I GTAC 4 cut(s) 540, 717, 1132, 1570
CviAII CATG 7 cut(s) 166, 250, 437, 689, 739, 1016, 1087
CviQI GTAC 4 cut(s) 540, 717, 1132, 1570
DdeI CTNAG 7 cut(s) 225, 561, 655, 1039, 1389, 1499, 1566
DpnI GATC 4 cut(s) 74, 254, 1083, 1395
DpnII GATC 4 cut(s) 72, 252, 1081, 1393
DrdI GACNNNNNNGTC 1 cut(s) 612
DseDI GACNNNNNNGTC 1 cut(s) 612
EaeI YGGCCR 3 cut(s) 276, 979, 1198
Eam1104I CTCTTC 3 cut(s) 35, 785, 893
EarI CTCTTC 3 cut(s) 35, 785, 893
Eco130I CCWWGG 4 cut(s) 479, 1086, 1419, 1481
Eco47I GGWCC 1 cut(s) 1295
Eco57I CTGAAG 4 cut(s) 83, 117, 153, 160
EcoNI CCTNNNNNAGG 1 cut(s) 1485
EcoRII CCWGG 1 cut(s) 1338
EcoT14I CCWWGG 4 cut(s) 479, 1086, 1419, 1481
ErhI CCWWGG 4 cut(s) 479, 1086, 1419, 1481
FaeI CATG 7 cut(s) 169, 253, 440, 692, 742, 1019, 1090
FalI AAGNNNNNCTT 2 cut(s) 328, 360
FaqI GGGAC 1 cut(s) 125
FatI CATG 7 cut(s) 165, 249, 436, 688, 738, 1015, 1086
FauI CCCGC 2 cut(s) 779, 887
FblI GTMKAC 1 cut(s) 693
FokI GGATG 6 cut(s) 17, 167, 549, 669, 827, 935
FspBI CTAG 2 cut(s) 311, 1346
GlaI GCGC 1 cut(s) 1514
GsuI CTGGAG 1 cut(s) 1078
HaeIII GGCC 4 cut(s) 200, 278, 981, 1200
HapII CCGG 3 cut(s) 39, 534, 726
HhaI GCGC 1 cut(s) 1515
Hin1II CATG 7 cut(s) 169, 253, 440, 692, 742, 1019, 1090
Hin6I GCGC 1 cut(s) 1513
HinP1I GCGC 1 cut(s) 1513
HincII GTYRAC 1 cut(s) 694
HindII GTYRAC 1 cut(s) 694
HindIII AAGCTT 1 cut(s) 1046
HinfI GANTC 5 cut(s) 400, 729, 793, 901, 1216
HpaII CCGG 3 cut(s) 39, 534, 726
HphI GGTGA 3 cut(s) 53, 1181, 1573
Hpy166II GTNNAC 4 cut(s) 85, 694, 1409, 1572
Hpy188I TCNGA 7 cut(s) 63, 328, 562, 658, 1081, 1215, 1579
Hpy188III TCNNGA 8 cut(s) 82, 508, 739, 812, 920, 1016, 1397, 1535
Hpy8I GTNNAC 4 cut(s) 85, 694, 1409, 1572
HpyAV CCTTC 8 cut(s) 27, 184, 385, 505, 630, 1088, 1166, 1273
HpyCH4III ACNGT 1 cut(s) 1131
HpyCH4IV ACGT 1 cut(s) 578
HpyF10VI GCNNNNNNNGC 7 cut(s) 128, 155, 167, 212, 221, 371, 530
HpyF3I CTNAG 7 cut(s) 225, 561, 655, 1039, 1389, 1499, 1566
HpySE526I ACGT 1 cut(s) 578
Hsp92II CATG 7 cut(s) 169, 253, 440, 692, 742, 1019, 1090
HspAI GCGC 1 cut(s) 1513
Kzo9I GATC 4 cut(s) 72, 252, 1081, 1393
LguI GCTCTTC 1 cut(s) 35
LmnI GCTCC 2 cut(s) 523, 1373
LweI GCATC 5 cut(s) 145, 578, 805, 853, 913
MaeI CTAG 2 cut(s) 311, 1346
MaeII ACGT 1 cut(s) 578
MaeIII GTNAC 3 cut(s) 574, 640, 1561
MalI GATC 4 cut(s) 74, 254, 1083, 1395
MboI GATC 4 cut(s) 72, 252, 1081, 1393
MflI RGATCY 2 cut(s) 72, 1393
MhlI GDGCHC 1 cut(s) 670
MlsI TGGCCA 2 cut(s) 278, 981
MluCI AATT 5 cut(s) 798, 906, 1034, 1147, 1506
MluNI TGGCCA 2 cut(s) 278, 981
MlyI GAGTC 3 cut(s) 394, 802, 910
Mox20I TGGCCA 2 cut(s) 278, 981
MroXI GAANNNNTTC 1 cut(s) 57
MscI TGGCCA 2 cut(s) 278, 981
MseI TTAA 5 cut(s) 429, 444, 552, 633, 1470
MslI CAYNNNNRTG 4 cut(s) 687, 1194, 1265, 1591
Msp20I TGGCCA 2 cut(s) 278, 981
MspA1I CMGCKG 3 cut(s) 122, 746, 1503
MspCI CTTAAG 2 cut(s) 443, 551
MspI CCGG 3 cut(s) 39, 534, 726
MspR9I CCNGG 1 cut(s) 1340
MvaI CCWGG 1 cut(s) 1340
MvnI CGCG 1 cut(s) 1515
MwoI GCNNNNNNNGC 7 cut(s) 128, 155, 167, 212, 221, 371, 530
NcoI CCATGG 1 cut(s) 1086
NdeII GATC 4 cut(s) 72, 252, 1081, 1393
NlaIII CATG 7 cut(s) 169, 253, 440, 692, 742, 1019, 1090
NlaIV GGNNCC 6 cut(s) 74, 450, 667, 1111, 1261, 1395
NmuCI GTSAC 2 cut(s) 574, 1561
OliI CACNNNNGTG 1 cut(s) 1194
PagI TCATGA 2 cut(s) 738, 1015
PaqCI CACCTGC 1 cut(s) 1549
PciSI GCTCTTC 1 cut(s) 35
PdmI GAANNNNTTC 1 cut(s) 57
PfeI GAWTC 2 cut(s) 729, 1216
PleI GAGTC 3 cut(s) 394, 801, 909
PpsI GAGTC 3 cut(s) 394, 801, 909
PshAI GACNNNNGTC 2 cut(s) 404, 437
Psp6I CCWGG 1 cut(s) 1338
PspGI CCWGG 1 cut(s) 1338
PspN4I GGNNCC 6 cut(s) 74, 450, 667, 1111, 1261, 1395
PspPI GGNCC 2 cut(s) 198, 1295
PstI CTGCAG 3 cut(s) 751, 946, 1381
PstNI CAGNNNCTG 1 cut(s) 326
PsuI RGATCY 2 cut(s) 72, 1393
PvuII CAGCTG 2 cut(s) 122, 746
RsaI GTAC 4 cut(s) 541, 718, 1133, 1571
RsaNI GTAC 4 cut(s) 540, 717, 1132, 1570
RseI CAYNNNNRTG 4 cut(s) 687, 1194, 1265, 1591
SalI GTCGAC 1 cut(s) 692
SapI GCTCTTC 1 cut(s) 35
SaqAI TTAA 5 cut(s) 429, 444, 552, 633, 1470
Sau3AI GATC 4 cut(s) 72, 252, 1081, 1393
Sau96I GGNCC 2 cut(s) 198, 1295
SchI GAGTC 3 cut(s) 394, 802, 910
ScrFI CCNGG 1 cut(s) 1340
SduI GDGCHC 1 cut(s) 670
SfaNI GCATC 5 cut(s) 145, 578, 805, 853, 913
SfcI CTRYAG 6 cut(s) 747, 942, 988, 1158, 1323, 1377
SgrAI CRCCGGYG 1 cut(s) 38
SinI GGWCC 1 cut(s) 1295
SmiMI CAYNNNNRTG 4 cut(s) 687, 1194, 1265, 1591
SmlI CTYRAG 3 cut(s) 443, 551, 1546
SmoI CTYRAG 3 cut(s) 443, 551, 1546
Sse9I AATT 5 cut(s) 798, 906, 1034, 1147, 1506
SsiI CCGC 4 cut(s) 543, 786, 894, 1503
SspMI CTAG 2 cut(s) 311, 1346
StyD4I CCNGG 1 cut(s) 1338
StyI CCWWGG 4 cut(s) 479, 1086, 1419, 1481
TaaI ACNGT 1 cut(s) 1131
TaiI ACGT 1 cut(s) 581
TaqI TCGA 3 cut(s) 693, 825, 933
TasI AATT 5 cut(s) 798, 906, 1034, 1147, 1506
TatI WGTACW 2 cut(s) 716, 1569
TfiI GAWTC 2 cut(s) 729, 1216
Tru1I TTAA 5 cut(s) 429, 444, 552, 633, 1470
Tru9I TTAA 5 cut(s) 429, 444, 552, 633, 1470
TscAI CASTG 2 cut(s) 156, 1386
TseFI GTSAC 2 cut(s) 574, 1561
Tsp45I GTSAC 2 cut(s) 574, 1561
TspDTI ATGAA 7 cut(s) 22, 330, 1004, 1032, 1219, 1347, 1488
TspGWI ACGGA 3 cut(s) 85, 1102, 1206
TspRI CASTG 2 cut(s) 156, 1386
Vha464I CTTAAG 2 cut(s) 443, 551
VpaK11BI GGWCC 1 cut(s) 1295
XagI CCTNNNNNAGG 1 cut(s) 1485
XapI RAATTY 2 cut(s) 1034, 1147
XmiI GTMKAC 1 cut(s) 693
XmnI GAANNNNTTC 1 cut(s) 57
XspI CTAG 2 cut(s) 311, 1346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.