Rmu_sc0013358.1_g000005

Amino-acid acetyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013358.1
Physical Location & Seq
Reverse (-)
10977 .. 12634
1658 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013358.1_g000005.1.cds

Sequence Viewer

Length: 474 bp
atggctagggtgtcggacctctctggaataagacaaatcatacaacctttagaagcagctggcacattggttacgagaactgacgaagagctacttgaagcattggattcttatgttgttgtcgaaagagaaggtcaaattattgcatgtgctgctctttttcctttccaagaggagaaatgtgcagaggtggctgctattgcagtttctccggattgtcgtggacaaggacagggagataaattacttgattacatggagaagaaggcatcttctcttggactggaaaagcttttcttgctaacaacccgaactgcagattggtttaagagacgtggattttctgaatgttcaattgaatcaataccagagaagcggagggaaaagattaatctatcccgtagatccaagtattatatgaagcagctgttacctgatacgagcggaattactgttgatagggtgttctcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

157

Amino Acids

17.65

Weight (kDa)

5.68

Isoelectric Point (pI)

56.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021110)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g16532
rosa_multiflora Rmu_sc0007406.1_g000004 Rmu_sc0013358.1_g000005
rosa_samantha Rh1AG118100 Rh1CG113000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 444
AccIII TCCGGA 1 cut(s) 211
AciI CCGC 2 cut(s) 376, 444
AclWI GGATC 1 cut(s) 399
AgsI TTSAA 3 cut(s) 98, 354, 359
AjiI CACGTC 1 cut(s) 335
AjuI GAANNNNNNNTTGG 2 cut(s) 304, 336
AluBI AGCT 4 cut(s) 59, 91, 292, 427
AluI AGCT 4 cut(s) 59, 91, 292, 427
Alw26I GTCTC 1 cut(s) 325
AlwI GGATC 1 cut(s) 399
Aor13HI TCCGGA 1 cut(s) 211
ApeKI GCWGC 4 cut(s) 56, 152, 194, 424
AseI ATTAAT 1 cut(s) 390
AspS9I GGNCC 1 cut(s) 16
AvaII GGWCC 1 cut(s) 16
BbvI GCAGC 4 cut(s) 68, 139, 181, 436
BcoDI GTCTC 1 cut(s) 325
BfaI CTAG 1 cut(s) 6
BfmI CTRYAG 1 cut(s) 315
BisI GCNGC 4 cut(s) 57, 153, 195, 425
BlsI GCNGC 4 cut(s) 58, 154, 196, 426
Bme18I GGWCC 1 cut(s) 16
BmgBI CACGTC 1 cut(s) 335
BmgT120I GGNCC 1 cut(s) 16
BmsI GCATC 1 cut(s) 278
BsaWI WCCGGW 1 cut(s) 211
Bse1I ACTGG 1 cut(s) 288
BseAI TCCGGA 1 cut(s) 211
BseNI ACTGG 1 cut(s) 288
BseRI GAGGAG 1 cut(s) 188
BseXI GCAGC 4 cut(s) 68, 139, 181, 436
BsgI GTGCAG 1 cut(s) 204
BsiSI CCGG 1 cut(s) 212
BsmAI GTCTC 1 cut(s) 325
BsmBI CGTCTC 1 cut(s) 325
Bsp13I TCCGGA 1 cut(s) 211
Bsp143I GATC 1 cut(s) 404
BspACI CCGC 2 cut(s) 376, 444
BspEI TCCGGA 1 cut(s) 211
BspMAI CTGCAG 1 cut(s) 319
BspPI GGATC 1 cut(s) 399
BspQI GCTCTTC 1 cut(s) 81
BsrBI CCGCTC 1 cut(s) 444
BsrI ACTGG 1 cut(s) 288
BssMI GATC 1 cut(s) 404
Bst4CI ACNGT 1 cut(s) 454
Bst6I CTCTTC 1 cut(s) 81
BstAPI GCANNNNNTGC 1 cut(s) 152
BstC8I GCNNGC 1 cut(s) 61
BstKTI GATC 1 cut(s) 407
BstMAI GTCTC 1 cut(s) 325
BstMBI GATC 1 cut(s) 404
BstMWI GCNNNNNNNGC 4 cut(s) 152, 191, 200, 298
BstNSI RCATGY 1 cut(s) 150
BstSFI CTRYAG 1 cut(s) 315
BstV1I GCAGC 4 cut(s) 68, 139, 181, 436
BstX2I RGATCY 1 cut(s) 404
BstYI RGATCY 1 cut(s) 404
BtrI CACGTC 1 cut(s) 335
Cac8I GCNNGC 1 cut(s) 61
Cfr13I GGNCC 1 cut(s) 16
CviAII CATG 2 cut(s) 147, 256
CviJI RGCY 6 cut(s) 5, 59, 91, 194, 292, 427
CviKI_1 RGCY 6 cut(s) 5, 59, 91, 194, 292, 427
DpnI GATC 1 cut(s) 406
DpnII GATC 1 cut(s) 404
Eam1104I CTCTTC 1 cut(s) 81
EarI CTCTTC 1 cut(s) 81
Eco47I GGWCC 1 cut(s) 16
Esp3I CGTCTC 1 cut(s) 325
FaeI CATG 2 cut(s) 150, 259
FaiI YATR 6 cut(s) 41, 114, 148, 257, 417, 419
FalI AAGNNNNNCTT 4 cut(s) 78, 110, 281, 313
FatI CATG 2 cut(s) 146, 255
Fnu4HI GCNGC 4 cut(s) 57, 153, 195, 425
Fsp4HI GCNGC 4 cut(s) 57, 153, 195, 425
FspBI CTAG 1 cut(s) 6
GluI GCNGC 4 cut(s) 57, 153, 195, 425
HapII CCGG 1 cut(s) 212
Hin1II CATG 2 cut(s) 150, 259
HindIII AAGCTT 1 cut(s) 290
HinfI GANTC 2 cut(s) 107, 359
HpaII CCGG 1 cut(s) 212
Hpy166II GTNNAC 1 cut(s) 224
Hpy188I TCNGA 2 cut(s) 16, 346
Hpy188III TCNNGA 3 cut(s) 24, 212, 471
Hpy8I GTNNAC 1 cut(s) 224
HpyAV CCTTC 2 cut(s) 125, 259
HpyCH4III ACNGT 1 cut(s) 454
HpyCH4IV ACGT 1 cut(s) 334
HpyCH4V TGCA 4 cut(s) 146, 185, 203, 317
HpyF10VI GCNNNNNNNGC 4 cut(s) 152, 191, 200, 298
HpySE526I ACGT 1 cut(s) 334
Hsp92II CATG 2 cut(s) 150, 259
Kpn2I TCCGGA 1 cut(s) 211
Kzo9I GATC 1 cut(s) 404
LguI GCTCTTC 1 cut(s) 81
LpnPI CCDG 7 cut(s) 9, 45, 218, 225, 269, 381, 447
Lsp1109I GCAGC 4 cut(s) 68, 139, 181, 436
LweI GCATC 1 cut(s) 278
MaeI CTAG 1 cut(s) 6
MaeII ACGT 1 cut(s) 334
MaeIII GTNAC 2 cut(s) 70, 429
MalI GATC 1 cut(s) 406
MbiI CCGCTC 1 cut(s) 444
MboI GATC 1 cut(s) 404
MboII GAAGA 3 cut(s) 98, 264, 274
MfeI CAATTG 1 cut(s) 354
MflI RGATCY 1 cut(s) 404
MluCI AATT 4 cut(s) 138, 242, 354, 447
MnlI CCTC 4 cut(s) 29, 166, 181, 372
MroI TCCGGA 1 cut(s) 211
MseI TTAA 2 cut(s) 327, 390
MspA1I CMGCKG 2 cut(s) 59, 427
MspI CCGG 1 cut(s) 212
MunI CAATTG 1 cut(s) 354
MwoI GCNNNNNNNGC 4 cut(s) 152, 191, 200, 298
NdeII GATC 1 cut(s) 404
NlaIII CATG 2 cut(s) 150, 259
NspI RCATGY 1 cut(s) 150
PciSI GCTCTTC 1 cut(s) 81
PfeI GAWTC 2 cut(s) 107, 359
PkrI GCNGC 4 cut(s) 58, 154, 196, 426
PshBI ATTAAT 1 cut(s) 390
PspPI GGNCC 1 cut(s) 16
PstI CTGCAG 1 cut(s) 319
PsuI RGATCY 1 cut(s) 404
PvuII CAGCTG 2 cut(s) 59, 427
SapI GCTCTTC 1 cut(s) 81
SaqAI TTAA 2 cut(s) 327, 390
SatI GCNGC 4 cut(s) 57, 153, 195, 425
Sau3AI GATC 1 cut(s) 404
Sau96I GGNCC 1 cut(s) 16
SfaNI GCATC 1 cut(s) 278
SfcI CTRYAG 1 cut(s) 315
SinI GGWCC 1 cut(s) 16
Sse9I AATT 4 cut(s) 138, 242, 354, 447
SsiI CCGC 2 cut(s) 376, 444
SspMI CTAG 1 cut(s) 6
TaaI ACNGT 1 cut(s) 454
TaiI ACGT 1 cut(s) 337
TaqI TCGA 1 cut(s) 123
TasI AATT 4 cut(s) 138, 242, 354, 447
TfiI GAWTC 2 cut(s) 107, 359
Tru1I TTAA 2 cut(s) 327, 390
Tru9I TTAA 2 cut(s) 327, 390
TseI GCWGC 4 cut(s) 56, 152, 194, 424
TspDTI ATGAA 1 cut(s) 434
VpaK11BI GGWCC 1 cut(s) 16
VspI ATTAAT 1 cut(s) 390
XceI RCATGY 1 cut(s) 150
XspI CTAG 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.