Rmu_sc0021254.1_g000001

UDP-3-O-acylglucosamine N-acyltransferase 2

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021254.1
Physical Location & Seq
Reverse (-)
101 .. 903
803 bp
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UTR
Exon/CDS
Intron
Rmu_sc0021254.1_g000001.1.cds

Sequence Viewer

Length: 297 bp
atgctgaatgctaggatagggaactgtgtggagattggtgcaaatacatgcattgacaggggcagttggagagatacagttgtaggagatcattcgaagattgataatttagttcagattggtcataatgtagttattggggagaattgcatgctttgtggtcaagttgggattgcaggctcagtgacggtaggagactatgtgactatgggaggaagggtagcagttcgtgaccatgtctccattgtatcaaaggtatttgcactaagagccggtcgagtgcctaaagtttcatga

Protein Analysis

98

Amino Acids

10.33

Weight (kDa)

8.48

Isoelectric Point (pI)

5.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021032)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02750
rosa_multiflora Rmu_sc0000547.1_g000006 Rmu_sc0021254.1_g000001
rosa_samantha Rh5AG035800 Rh5CG038500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Alw26I GTCTC 2 cut(s) 189, 244
AsuII TTCGAA 1 cut(s) 95
BaeI ACNNNNGTAYC 2 cut(s) 66, 99
BcoDI GTCTC 2 cut(s) 189, 244
BfaI CTAG 1 cut(s) 12
Bpu14I TTCGAA 1 cut(s) 95
BsaXI ACNNNNNCTCC 6 cut(s) 186, 204, 216, 224, 234, 254
Bse118I RCCGGY 1 cut(s) 272
BseMII CTCAG 1 cut(s) 195
Bsh1285I CGRYCG 1 cut(s) 277
BsiEI CGRYCG 1 cut(s) 277
BsiSI CCGG 1 cut(s) 273
BsmAI GTCTC 2 cut(s) 189, 244
BsmI GAATGC 1 cut(s) 13
Bsp119I TTCGAA 1 cut(s) 95
Bsp143I GATC 1 cut(s) 88
BspCNI CTCAG 1 cut(s) 194
BspHI TCATGA 1 cut(s) 293
BspT104I TTCGAA 1 cut(s) 95
BsrFI RCCGGY 1 cut(s) 272
BssAI RCCGGY 1 cut(s) 272
BssMI GATC 1 cut(s) 88
Bst4CI ACNGT 3 cut(s) 26, 79, 190
BstBI TTCGAA 1 cut(s) 95
BstC8I GCNNGC 2 cut(s) 152, 178
BstDEI CTNAG 2 cut(s) 181, 266
BstKTI GATC 1 cut(s) 91
BstMAI GTCTC 2 cut(s) 189, 244
BstMBI GATC 1 cut(s) 88
BstMCI CGRYCG 1 cut(s) 277
BstMWI GCNNNNNNNGC 1 cut(s) 269
BstNSI RCATGY 2 cut(s) 51, 154
BtsIMutI CAGTG 1 cut(s) 189
Cac8I GCNNGC 2 cut(s) 152, 178
CciI TCATGA 1 cut(s) 293
Cfr10I RCCGGY 1 cut(s) 272
CviAII CATG 4 cut(s) 48, 151, 236, 294
CviJI RGCY 2 cut(s) 180, 272
CviKI_1 RGCY 2 cut(s) 180, 272
DdeI CTNAG 2 cut(s) 181, 266
DpnI GATC 1 cut(s) 90
DpnII GATC 1 cut(s) 88
EcoT22I ATGCAT 1 cut(s) 53
FaeI CATG 4 cut(s) 51, 154, 239, 297
FaiI YATR 7 cut(s) 49, 126, 152, 201, 209, 237, 295
FatI CATG 4 cut(s) 47, 150, 235, 293
FspBI CTAG 1 cut(s) 12
HapII CCGG 1 cut(s) 273
Hin1II CATG 4 cut(s) 51, 154, 239, 297
HpaII CCGG 1 cut(s) 273
Hpy188I TCNGA 1 cut(s) 117
Hpy188III TCNNGA 2 cut(s) 230, 294
HpyAV CCTTC 1 cut(s) 210
HpyCH4III ACNGT 3 cut(s) 26, 79, 190
HpyCH4V TGCA 5 cut(s) 41, 51, 150, 176, 263
HpyF10VI GCNNNNNNNGC 1 cut(s) 269
HpyF3I CTNAG 2 cut(s) 181, 266
Hsp92II CATG 4 cut(s) 51, 154, 239, 297
Kzo9I GATC 1 cut(s) 88
LpnPI CCDG 3 cut(s) 43, 162, 286
MaeI CTAG 1 cut(s) 12
MaeIII GTNAC 3 cut(s) 184, 202, 230
MalI GATC 1 cut(s) 90
MboI GATC 1 cut(s) 88
MboII GAAGA 1 cut(s) 109
MluCI AATT 2 cut(s) 106, 145
MmeI TCCRAC 1 cut(s) 47
MnlI CCTC 1 cut(s) 206
Mph1103I ATGCAT 1 cut(s) 53
MspI CCGG 1 cut(s) 273
Mva1269I GAATGC 1 cut(s) 13
MwoI GCNNNNNNNGC 1 cut(s) 269
NdeII GATC 1 cut(s) 88
NlaIII CATG 4 cut(s) 51, 154, 239, 297
NmuCI GTSAC 3 cut(s) 184, 202, 230
NsiI ATGCAT 1 cut(s) 53
NspI RCATGY 2 cut(s) 51, 154
NspV TTCGAA 1 cut(s) 95
PaeI GCATGC 1 cut(s) 154
PagI TCATGA 1 cut(s) 293
PctI GAATGC 1 cut(s) 13
PflFI GACNNNGTC 1 cut(s) 236
PsyI GACNNNGTC 1 cut(s) 236
Sau3AI GATC 1 cut(s) 88
SetI ASST 1 cut(s) 258
SfuI TTCGAA 1 cut(s) 95
SphI GCATGC 1 cut(s) 154
Sse9I AATT 2 cut(s) 106, 145
SspMI CTAG 1 cut(s) 12
TaaI ACNGT 3 cut(s) 26, 79, 190
TaqI TCGA 2 cut(s) 95, 277
TasI AATT 2 cut(s) 106, 145
TscAI CASTG 1 cut(s) 189
TseFI GTSAC 3 cut(s) 184, 202, 230
Tsp45I GTSAC 3 cut(s) 184, 202, 230
TspDTI ATGAA 1 cut(s) 282
TspRI CASTG 1 cut(s) 189
Tth111I GACNNNGTC 1 cut(s) 236
XceI RCATGY 2 cut(s) 51, 154
XspI CTAG 1 cut(s) 12
Zsp2I ATGCAT 1 cut(s) 53
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.