Rmu_sc0023565.1_g000002

Belongs to the glycosyltransferase 1 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0023565.1
Physical Location & Seq
Reverse (-)
7858 .. 12886
5029 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0023565.1_g000002.1.cds

Sequence Viewer

Length: 1431 bp
atgtaccactgtggctccttcacgaatccttgttctgaccatgatgtgtcagcgggtggcagatctccttccttggtcgtatcgaagccaaaaacttccctccgcctctcactctcactctctctccgctcgaagtctccgctcgaagtcgctacctggtcgagctcgaagtcgccgaagcttagtcgctacccaggtggtttactctctccgctgcctgagctcgaagtcgccgaagcttacggccgcatcaactctggtgttgttgtactaattaatcagcttgagggagaagaagctcaacgaacagcgaggcgtcgggatgagcgtgaaaggggaaggagagaggcaactgaggacatgtcagaagacttatctgaaggagagagtagagacacagttggtgatatttcagctcataatagtgatagcactagaggaggaagaatgcgtagaatcaattctatggatgtgatggagaactgggatgctcatcaaaaggaaaagaaattctacattgtcctccatggcttgatacgcggtgaaaacatggagcttggtcgtgattctgatacaggtggccaggtcaagtatattgtggaacttgccagggccttgggttcaatgcctggagtttatcgcgttgatttactaacaagacaagtttcatctccagatgtggaatggagttatggggaaccaactgaaatgttgaatccagtaaactctgagaatccacaagaggagcttggggagagtactggggcttatatagtgcgtataccatttggcccaaaagataaatacgttcccaaagaactcctttggccacacattcctgagtttgtagacggagcacttaaccatattatacagttgtccaaagctcttggagagcaaattggaggtggggaaccggtgtggccggtggcaattcatggacactatgcagatgcaggtgactctgctgctcttctgtctggagccttgaatgtcccaatgttatttactgatcctaagaagaatattacgactttagttaaagcatttggagagtgtcgccctttgagggatctttctaacctcacattaattatgggaaaccgcgatgatattgatgaaatgtcaagcacaaatgcctctgtgcttctttctattttaaagctgattgacagatatgatctgtatggtcatgtggcatatccgaaacaccacaagcagtctgatgttcctgacatctatcgagtggttgtgcaagaggttattttgtgcttggctcggctcagctcgaataacctcatcatattatttcccccttataacaatagttgttgtgcaagagattatttggttatttacttgacaggaaaagtggcaatatctcatgttatgattagggacgggaggttggtttttagtggctccccttag

Protein Analysis

476

Amino Acids

52.67

Weight (kDa)

5.86

Isoelectric Point (pI)

45.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024985)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr4g0401671 RchiOBHm_Chr7g0223581
rosa_multiflora Rmu_sc0023565.1_g000002

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1320
AarI CACCTGC 1 cut(s) 947
Acc36I ACCTGC 1 cut(s) 947
AccBSI CCGCTC 2 cut(s) 129, 142
AccI GTMKAC 2 cut(s) 781, 849
AccII CGCG 3 cut(s) 540, 642, 1107
AciI CCGC 8 cut(s) 53, 103, 127, 140, 212, 247, 540, 1105
AclWI GGATC 2 cut(s) 1007, 1080
AcoI YGGCCR 4 cut(s) 244, 580, 827, 923
AcsI RAATTY 1 cut(s) 509
AcuI CTGAAG 1 cut(s) 399
AcyI GRCGYC 1 cut(s) 316
AfaI GTAC 3 cut(s) 5, 270, 760
AfiI CCNNNNNNNGG 1 cut(s) 1069
AflIII ACRYGT 1 cut(s) 360
AgeI ACCGGT 1 cut(s) 916
AgsI TTSAA 3 cut(s) 624, 715, 991
AjnI CCWGG 5 cut(s) 155, 193, 582, 608, 628
Alw21I GWGCWC 3 cut(s) 167, 225, 859
Alw26I GTCTC 2 cut(s) 141, 387
AlwI GGATC 2 cut(s) 1007, 1080
AoxI GGCC 6 cut(s) 244, 580, 612, 790, 827, 923
ApeKI GCWGC 2 cut(s) 214, 968
ApoI RAATTY 1 cut(s) 509
AseI ATTAAT 2 cut(s) 276, 1091
AsiGI ACCGGT 1 cut(s) 916
Asp700I GAANNNNTTC 1 cut(s) 460
AspS9I GGNCC 2 cut(s) 612, 791
AsuHPI GGTGA 3 cut(s) 416, 554, 971
BalI TGGCCA 2 cut(s) 582, 829
BanII GRGCYC 2 cut(s) 167, 225
BbsI GAAGAC 1 cut(s) 375
Bbv12I GWGCWC 3 cut(s) 167, 225, 859
BbvI GCAGC 2 cut(s) 201, 955
BccI CCATC 1 cut(s) 469
BceAI ACGGC 1 cut(s) 259
BciT130I CCWGG 5 cut(s) 157, 195, 584, 610, 630
BcoDI GTCTC 2 cut(s) 141, 387
BfaI CTAG 1 cut(s) 435
BfuAI ACCTGC 1 cut(s) 947
BglII AGATCT 1 cut(s) 62
BisI GCNGC 3 cut(s) 215, 247, 969
BlpI GCTNAGC 1 cut(s) 1283
BlsI GCNGC 3 cut(s) 216, 248, 970
BmcAI AGTACT 1 cut(s) 760
Bme1390I CCNGG 5 cut(s) 157, 195, 584, 610, 630
BmgT120I GGNCC 2 cut(s) 612, 791
BmiI GGNNCC 5 cut(s) 16, 699, 915, 985, 1423
BmrFI CCNGG 5 cut(s) 157, 195, 584, 610, 630
BmrI ACTGGG 2 cut(s) 493, 771
BmsI GCATC 3 cut(s) 258, 478, 943
BmuI ACTGGG 2 cut(s) 493, 771
BpiI GAAGAC 1 cut(s) 375
BpmI CTGGAG 3 cut(s) 651, 657, 1002
Bpu10I CCTNAGC 1 cut(s) 219
Bpu1102I GCTNAGC 1 cut(s) 1283
BpuEI CTTGAG 1 cut(s) 305
BsaBI GATNNNNATC 1 cut(s) 492
BsaHI GRCGYC 1 cut(s) 316
BsaJI CCNNGG 5 cut(s) 72, 193, 526, 609, 615
BsaWI WCCGGW 1 cut(s) 916
BsaXI ACNNNNNCTCC 3 cut(s) 29, 108, 138
Bsc4I CCNNNNNNNGG 1 cut(s) 1069
Bse118I RCCGGY 2 cut(s) 916, 925
Bse1I ACTGG 3 cut(s) 488, 719, 766
Bse8I GATNNNNATC 1 cut(s) 492
BseBI CCWGG 5 cut(s) 157, 195, 584, 610, 630
BseDI CCNNGG 5 cut(s) 72, 193, 526, 609, 615
BseGI GGATG 3 cut(s) 328, 475, 493
BseJI GATNNNNATC 1 cut(s) 492
BseLI CCNNNNNNNGG 1 cut(s) 1069
BseMII CTCAG 5 cut(s) 210, 345, 720, 831, 1297
BseNI ACTGG 3 cut(s) 488, 719, 766
BseRI GAGGAG 2 cut(s) 453, 758
BseX3I CGGCCG 1 cut(s) 244
BseXI GCAGC 2 cut(s) 201, 955
Bsh1236I CGCG 3 cut(s) 540, 642, 1107
Bsh1285I CGRYCG 1 cut(s) 247
BshFI GGCC 6 cut(s) 246, 582, 614, 792, 829, 925
BshTI ACCGGT 1 cut(s) 916
BsiEI CGRYCG 1 cut(s) 247
BsiHKAI GWGCWC 3 cut(s) 167, 225, 859
BsiSI CCGG 2 cut(s) 917, 926
BslFI GGGAC 2 cut(s) 980, 1412
BslI CCNNNNNNNGG 1 cut(s) 1069
BsmAI GTCTC 2 cut(s) 141, 387
BsmFI GGGAC 2 cut(s) 980, 1412
BsmI GAATGC 1 cut(s) 453
BsnI GGCC 6 cut(s) 246, 582, 614, 792, 829, 925
Bsp1286I GDGCHC 3 cut(s) 167, 225, 859
Bsp143I GATC 4 cut(s) 62, 1012, 1072, 1180
Bsp1720I GCTNAGC 1 cut(s) 1283
Bsp19I CCATGG 1 cut(s) 526
BspACI CCGC 8 cut(s) 53, 103, 127, 140, 212, 247, 540, 1105
BspANI GGCC 6 cut(s) 246, 582, 614, 792, 829, 925
BspCNI CTCAG 5 cut(s) 211, 346, 721, 832, 1296
BspFNI CGCG 3 cut(s) 540, 642, 1107
BspLI GGNNCC 5 cut(s) 16, 699, 915, 985, 1423
BspMI ACCTGC 1 cut(s) 947
BspPI GGATC 2 cut(s) 1007, 1080
BspQI GCTCTTC 1 cut(s) 978
BsrBI CCGCTC 2 cut(s) 129, 142
BsrFI RCCGGY 2 cut(s) 916, 925
BsrI ACTGG 3 cut(s) 488, 719, 766
BssAI RCCGGY 2 cut(s) 916, 925
BssECI CCNNGG 5 cut(s) 72, 193, 526, 609, 615
BssMI GATC 4 cut(s) 62, 1012, 1072, 1180
BssNAI GTATAC 1 cut(s) 782
BssNI GRCGYC 1 cut(s) 316
BssT1I CCWWGG 3 cut(s) 72, 526, 615
Bst1107I GTATAC 1 cut(s) 782
Bst2UI CCWGG 5 cut(s) 157, 195, 584, 610, 630
Bst4CI ACNGT 3 cut(s) 11, 400, 876
Bst6I CTCTTC 1 cut(s) 978
BstACI GRCGYC 1 cut(s) 316
BstDEI CTNAG 8 cut(s) 182, 219, 354, 729, 840, 1017, 1283, 1428
BstDSI CCRYGG 1 cut(s) 526
BstF5I GGATG 3 cut(s) 328, 475, 493
BstFNI CGCG 3 cut(s) 540, 642, 1107
BstKTI GATC 4 cut(s) 65, 1015, 1075, 1183
BstMAI GTCTC 2 cut(s) 141, 387
BstMBI GATC 4 cut(s) 62, 1012, 1072, 1180
BstMCI CGRYCG 1 cut(s) 247
BstMWI GCNNNNNNNGC 2 cut(s) 220, 537
BstNI CCWGG 5 cut(s) 157, 195, 584, 610, 630
BstNSI RCATGY 1 cut(s) 364
BstSCI CCNGG 5 cut(s) 155, 193, 582, 608, 628
BstUI CGCG 3 cut(s) 540, 642, 1107
BstV1I GCAGC 2 cut(s) 201, 955
BstV2I GAAGAC 1 cut(s) 375
BstX2I RGATCY 2 cut(s) 62, 1072
BstXI CCANNNNNNTGG 1 cut(s) 616
BstYI RGATCY 2 cut(s) 62, 1072
BstZ17I GTATAC 1 cut(s) 782
BstZI CGGCCG 1 cut(s) 244
BsuRI GGCC 6 cut(s) 246, 582, 614, 792, 829, 925
BtgI CCRYGG 1 cut(s) 526
BtgZI GCGATG 1 cut(s) 1122
BtsCI GGATG 3 cut(s) 328, 475, 493
BtsIMutI CAGTG 1 cut(s) 7
BveI ACCTGC 1 cut(s) 947
Cfr10I RCCGGY 2 cut(s) 916, 925
Cfr13I GGNCC 2 cut(s) 612, 791
CseI GACGC 1 cut(s) 305
CsiI ACCWGGT 1 cut(s) 155
Csp6I GTAC 3 cut(s) 4, 269, 759
CspAI ACCGGT 1 cut(s) 916
CviAII CATG 7 cut(s) 41, 361, 527, 550, 938, 1193, 1385
CviQI GTAC 3 cut(s) 4, 269, 759
DdeI CTNAG 8 cut(s) 182, 219, 354, 729, 840, 1017, 1283, 1428
DpnI GATC 4 cut(s) 64, 1014, 1074, 1182
DpnII GATC 4 cut(s) 62, 1012, 1072, 1180
DraI TTTAAA 1 cut(s) 1161
EaeI YGGCCR 4 cut(s) 244, 580, 827, 923
EagI CGGCCG 1 cut(s) 244
Eam1104I CTCTTC 1 cut(s) 978
EarI CTCTTC 1 cut(s) 978
EciI GGCGGA 1 cut(s) 92
Ecl136II GAGCTC 2 cut(s) 165, 223
EclXI CGGCCG 1 cut(s) 244
Eco130I CCWWGG 3 cut(s) 72, 526, 615
Eco24I GRGCYC 2 cut(s) 167, 225
Eco52I CGGCCG 1 cut(s) 244
Eco53kI GAGCTC 2 cut(s) 165, 223
Eco57I CTGAAG 1 cut(s) 399
EcoICRI GAGCTC 2 cut(s) 165, 223
EcoO109I RGGNCCY 1 cut(s) 612
EcoRII CCWGG 5 cut(s) 155, 193, 582, 608, 628
EcoT14I CCWWGG 3 cut(s) 72, 526, 615
EcoT38I GRGCYC 2 cut(s) 167, 225
ErhI CCWWGG 3 cut(s) 72, 526, 615
FaeI CATG 7 cut(s) 44, 364, 530, 553, 941, 1196, 1388
FalI AAGNNNNNCTT 4 cut(s) 732, 764, 807, 839
FaqI GGGAC 2 cut(s) 980, 1412
FatI CATG 7 cut(s) 40, 360, 526, 549, 937, 1192, 1384
FauI CCCGC 1 cut(s) 46
FblI GTMKAC 2 cut(s) 781, 849
Fnu4HI GCNGC 3 cut(s) 215, 247, 969
FokI GGATG 3 cut(s) 335, 482, 500
FriOI GRGCYC 2 cut(s) 167, 225
Fsp4HI GCNGC 3 cut(s) 215, 247, 969
FspBI CTAG 1 cut(s) 435
GluI GCNGC 3 cut(s) 215, 247, 969
GsuI CTGGAG 3 cut(s) 651, 657, 1002
HaeIII GGCC 6 cut(s) 246, 582, 614, 792, 829, 925
HapII CCGG 2 cut(s) 917, 926
HgaI GACGC 1 cut(s) 305
Hin1I GRCGYC 1 cut(s) 316
Hin1II CATG 7 cut(s) 44, 364, 530, 553, 941, 1196, 1388
HindIII AAGCTT 2 cut(s) 179, 237
HinfI GANTC 6 cut(s) 25, 456, 566, 715, 733, 962
HpaII CCGG 2 cut(s) 917, 926
HphI GGTGA 3 cut(s) 416, 554, 971
Hpy166II GTNNAC 4 cut(s) 203, 724, 782, 850
Hpy188I TCNGA 7 cut(s) 37, 367, 379, 571, 730, 1206, 1225
Hpy188III TCNNGA 7 cut(s) 22, 320, 563, 674, 839, 981, 1232
Hpy8I GTNNAC 4 cut(s) 203, 724, 782, 850
Hpy99I CGWCG 1 cut(s) 321
HpyAV CCTTC 4 cut(s) 28, 78, 333, 374
HpyCH4III ACNGT 3 cut(s) 11, 400, 876
HpyCH4IV ACGT 1 cut(s) 807
HpyCH4V TGCA 4 cut(s) 950, 956, 1255, 1337
HpyF10VI GCNNNNNNNGC 2 cut(s) 220, 537
HpyF3I CTNAG 8 cut(s) 182, 219, 354, 729, 840, 1017, 1283, 1428
HpySE526I ACGT 1 cut(s) 807
Hsp92I GRCGYC 1 cut(s) 316
Hsp92II CATG 7 cut(s) 44, 364, 530, 553, 941, 1196, 1388
Kzo9I GATC 4 cut(s) 62, 1012, 1072, 1180
LguI GCTCTTC 1 cut(s) 978
LmnI GCTCC 6 cut(s) 20, 553, 745, 854, 983, 1427
Lsp1109I GCAGC 2 cut(s) 201, 955
LweI GCATC 3 cut(s) 258, 478, 943
MabI ACCWGGT 1 cut(s) 155
MaeI CTAG 1 cut(s) 435
MaeII ACGT 1 cut(s) 807
MaeIII GTNAC 1 cut(s) 959
MalI GATC 4 cut(s) 64, 1014, 1074, 1182
MbiI CCGCTC 2 cut(s) 129, 142
MboI GATC 4 cut(s) 62, 1012, 1072, 1180
MboII GAAGA 5 cut(s) 305, 380, 456, 965, 1033
MflI RGATCY 2 cut(s) 62, 1072
MhlI GDGCHC 3 cut(s) 167, 225, 859
MlsI TGGCCA 2 cut(s) 582, 829
MluCI AATT 6 cut(s) 273, 460, 509, 900, 933, 1092
MluNI TGGCCA 2 cut(s) 582, 829
MlyI GAGTC 1 cut(s) 956
Mox20I TGGCCA 2 cut(s) 582, 829
MroXI GAANNNNTTC 1 cut(s) 460
MscI TGGCCA 2 cut(s) 582, 829
MseI TTAA 5 cut(s) 276, 861, 1041, 1091, 1160
MslI CAYNNNNRTG 1 cut(s) 423
Msp20I TGGCCA 2 cut(s) 582, 829
MspA1I CMGCKG 2 cut(s) 53, 214
MspI CCGG 2 cut(s) 917, 926
MspR9I CCNGG 5 cut(s) 157, 195, 584, 610, 630
Mva1269I GAATGC 1 cut(s) 453
MvaI CCWGG 5 cut(s) 157, 195, 584, 610, 630
MvnI CGCG 3 cut(s) 540, 642, 1107
MwoI GCNNNNNNNGC 2 cut(s) 220, 537
NcoI CCATGG 1 cut(s) 526
NdeII GATC 4 cut(s) 62, 1012, 1072, 1180
NlaIII CATG 7 cut(s) 44, 364, 530, 553, 941, 1196, 1388
NlaIV GGNNCC 5 cut(s) 16, 699, 915, 985, 1423
NmeAIII GCCGAG 1 cut(s) 1258
NmuCI GTSAC 1 cut(s) 959
NspI RCATGY 1 cut(s) 364
PaqCI CACCTGC 1 cut(s) 947
PciI ACATGT 1 cut(s) 360
PciSI GCTCTTC 1 cut(s) 978
PcsI WCGNNNNNNNCGW 3 cut(s) 173, 231, 325
PctI GAATGC 1 cut(s) 453
PdmI GAANNNNTTC 1 cut(s) 460
PfeI GAWTC 5 cut(s) 25, 456, 566, 715, 733
PinAI ACCGGT 1 cut(s) 916
PkrI GCNGC 3 cut(s) 216, 248, 970
PleI GAGTC 1 cut(s) 956
PpsI GAGTC 1 cut(s) 956
PscI ACATGT 1 cut(s) 360
PshBI ATTAAT 2 cut(s) 276, 1091
PsiI TTATAA 1 cut(s) 1320
Psp124BI GAGCTC 2 cut(s) 167, 225
Psp6I CCWGG 5 cut(s) 155, 193, 582, 608, 628
PspGI CCWGG 5 cut(s) 155, 193, 582, 608, 628
PspN4I GGNNCC 5 cut(s) 16, 699, 915, 985, 1423
PspPI GGNCC 2 cut(s) 612, 791
PsuI RGATCY 2 cut(s) 62, 1072
RsaI GTAC 3 cut(s) 5, 270, 760
RsaNI GTAC 3 cut(s) 4, 269, 759
RseI CAYNNNNRTG 1 cut(s) 423
SacI GAGCTC 2 cut(s) 167, 225
SapI GCTCTTC 1 cut(s) 978
SaqAI TTAA 5 cut(s) 276, 861, 1041, 1091, 1160
SatI GCNGC 3 cut(s) 215, 247, 969
Sau3AI GATC 4 cut(s) 62, 1012, 1072, 1180
Sau96I GGNCC 2 cut(s) 612, 791
ScaI AGTACT 1 cut(s) 760
SchI GAGTC 1 cut(s) 956
ScrFI CCNGG 5 cut(s) 157, 195, 584, 610, 630
SduI GDGCHC 3 cut(s) 167, 225, 859
SexAI ACCWGGT 1 cut(s) 155
SfaNI GCATC 3 cut(s) 258, 478, 943
SmiMI CAYNNNNRTG 1 cut(s) 423
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
Sse9I AATT 6 cut(s) 273, 460, 509, 900, 933, 1092
SsiI CCGC 8 cut(s) 53, 103, 127, 140, 212, 247, 540, 1105
SspI AATATT 1 cut(s) 1027
SspMI CTAG 1 cut(s) 435
SstI GAGCTC 2 cut(s) 167, 225
StyD4I CCNGG 5 cut(s) 155, 193, 582, 608, 628
StyI CCWWGG 3 cut(s) 72, 526, 615
TaaI ACNGT 3 cut(s) 11, 400, 876
TaiI ACGT 1 cut(s) 810
TaqI TCGA 8 cut(s) 83, 131, 144, 161, 167, 225, 1243, 1289
TasI AATT 6 cut(s) 273, 460, 509, 900, 933, 1092
TatI WGTACW 2 cut(s) 268, 758
TauI GCSGC 1 cut(s) 249
TfiI GAWTC 5 cut(s) 25, 456, 566, 715, 733
Tru1I TTAA 5 cut(s) 276, 861, 1041, 1091, 1160
Tru9I TTAA 5 cut(s) 276, 861, 1041, 1091, 1160
TscAI CASTG 1 cut(s) 14
TseFI GTSAC 1 cut(s) 959
TseI GCWGC 2 cut(s) 214, 968
Tsp45I GTSAC 1 cut(s) 959
TspDTI ATGAA 3 cut(s) 657, 926, 1134
TspGWI ACGGA 1 cut(s) 867
TspRI CASTG 1 cut(s) 14
VspI ATTAAT 2 cut(s) 276, 1091
XapI RAATTY 1 cut(s) 509
XceI RCATGY 1 cut(s) 364
XcmI CCANNNNNNNNNTGG 1 cut(s) 681
XmiI GTMKAC 2 cut(s) 781, 849
XmnI GAANNNNTTC 1 cut(s) 460
XspI CTAG 1 cut(s) 435
ZrmI AGTACT 1 cut(s) 760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.