Rmu_sc0031017.1_g000001

Protein of unknown function (DUF2985)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0031017.1
Physical Location & Seq
Forward (+)
722 .. 1045
324 bp
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UTR
Exon/CDS
Intron
Rmu_sc0031017.1_g000001.1.cds

Sequence Viewer

Length: 324 bp
atgagaagagggaatacctatggcattgtagaagaccagttttgtagaaaagaaaccgatatttcgagccagccaccaatgttacccttgccccgtgaaaatggagttggtcaacttaggtctggtccaacttctcttttggggaactactcgagcccaactaagactggcataattggttctcctagtcctagtagattttcaaaggaactgtataatttagatagggcattttcttcagtgaaagaagaatctcatccaacaggtaaggataaaactaagaccgtacctgcaccctcattgatacgaagagaagccacatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

107

Amino Acids

11.75

Weight (kDa)

9.66

Isoelectric Point (pI)

56.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025039)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr5g0040071
rosa_laevigata RLG00000011427
rosa_multiflora Rmu_sc0031017.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 298
AcuI CTGAAG 1 cut(s) 222
AfaI GTAC 1 cut(s) 288
AgsI TTSAA 1 cut(s) 204
AjuI GAANNNNNNNTTGG 2 cut(s) 90, 122
Ama87I CYCGRG 1 cut(s) 151
AspS9I GGNCC 1 cut(s) 125
AvaI CYCGRG 1 cut(s) 151
AvaII GGWCC 1 cut(s) 125
BanII GRGCYC 1 cut(s) 158
BarI GAAGNNNNNNTAC 1 cut(s) 30
BbsI GAAGAC 1 cut(s) 39
BfaI CTAG 2 cut(s) 186, 192
BfuAI ACCTGC 1 cut(s) 298
Bme18I GGWCC 1 cut(s) 125
BmeT110I CYCGRG 1 cut(s) 151
BmgT120I GGNCC 1 cut(s) 125
BpiI GAAGAC 1 cut(s) 39
Bse1I ACTGG 2 cut(s) 37, 172
BseGI GGATG 1 cut(s) 256
BseNI ACTGG 2 cut(s) 37, 172
BsgI GTGCAG 1 cut(s) 276
BsiHKCI CYCGRG 1 cut(s) 151
BsoBI CYCGRG 1 cut(s) 151
Bsp1286I GDGCHC 1 cut(s) 158
BspMI ACCTGC 1 cut(s) 298
BsrI ACTGG 2 cut(s) 37, 172
Bst4CI ACNGT 2 cut(s) 213, 286
Bst6I CTCTTC 1 cut(s) 304
BstC8I GCNNGC 1 cut(s) 71
BstDEI CTNAG 3 cut(s) 116, 162, 279
BstF5I GGATG 1 cut(s) 256
BstV2I GAAGAC 1 cut(s) 39
BtsCI GGATG 1 cut(s) 256
BtsIMutI CAGTG 1 cut(s) 246
BveI ACCTGC 1 cut(s) 298
Cac8I GCNNGC 1 cut(s) 71
Cfr13I GGNCC 1 cut(s) 125
Csp6I GTAC 1 cut(s) 287
CviJI RGCY 4 cut(s) 69, 73, 156, 317
CviKI_1 RGCY 4 cut(s) 69, 73, 156, 317
CviQI GTAC 1 cut(s) 287
DdeI CTNAG 3 cut(s) 116, 162, 279
Eam1104I CTCTTC 1 cut(s) 304
EarI CTCTTC 1 cut(s) 304
Eco24I GRGCYC 1 cut(s) 158
Eco47I GGWCC 1 cut(s) 125
Eco57I CTGAAG 1 cut(s) 222
Eco88I CYCGRG 1 cut(s) 151
EcoT38I GRGCYC 1 cut(s) 158
FaiI YATR 4 cut(s) 21, 173, 216, 322
FokI GGATG 1 cut(s) 243
FriOI GRGCYC 1 cut(s) 158
FspBI CTAG 2 cut(s) 186, 192
HincII GTYRAC 1 cut(s) 113
HindII GTYRAC 1 cut(s) 113
HinfI GANTC 1 cut(s) 251
Hpy166II GTNNAC 1 cut(s) 113
Hpy8I GTNNAC 1 cut(s) 113
HpyCH4III ACNGT 2 cut(s) 213, 286
HpyCH4V TGCA 1 cut(s) 293
HpyF3I CTNAG 3 cut(s) 116, 162, 279
LpnPI CCDG 6 cut(s) 50, 83, 108, 153, 249, 303
MaeI CTAG 2 cut(s) 186, 192
MaeIII GTNAC 1 cut(s) 81
MboII GAAGA 5 cut(s) 18, 44, 228, 260, 321
MhlI GDGCHC 1 cut(s) 158
MluCI AATT 2 cut(s) 174, 217
MmeI TCCRAC 2 cut(s) 152, 284
MnlI CCTC 1 cut(s) 307
PaeR7I CTCGAG 1 cut(s) 151
PfeI GAWTC 1 cut(s) 251
PspPI GGNCC 1 cut(s) 125
PspXI VCTCGAGB 1 cut(s) 151
RsaI GTAC 1 cut(s) 288
RsaNI GTAC 1 cut(s) 287
Sau96I GGNCC 1 cut(s) 125
SduI GDGCHC 1 cut(s) 158
SetI ASST 4 cut(s) 20, 122, 268, 292
Sfr274I CTCGAG 1 cut(s) 151
SinI GGWCC 1 cut(s) 125
SlaI CTCGAG 1 cut(s) 151
SmlI CTYRAG 1 cut(s) 151
SmoI CTYRAG 1 cut(s) 151
Sse9I AATT 2 cut(s) 174, 217
SspMI CTAG 2 cut(s) 186, 192
TaaI ACNGT 2 cut(s) 213, 286
TaqI TCGA 2 cut(s) 65, 152
TasI AATT 2 cut(s) 174, 217
TfiI GAWTC 1 cut(s) 251
TscAI CASTG 1 cut(s) 246
TspRI CASTG 1 cut(s) 246
VpaK11BI GGWCC 1 cut(s) 125
XhoI CTCGAG 1 cut(s) 151
XspI CTAG 2 cut(s) 186, 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.