Rmu_ssc0000007.1_g000010

glycerol-3-phosphate transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000007.1
Physical Location & Seq
Reverse (-)
72932 .. 74586
1655 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000007.1_g000010.1.cds

Sequence Viewer

Length: 1563 bp
atggaagagggagctgttgagacaaattacaccaagcccttggggattcgatacatagagtacataaaaagatcgaagatttcatacaaaacccaccaagttattgttttgatcgttacttttctagcctatgcaagctaccatgccgcccggaaaaccactagtgtggtcaagagtactcttgatcctgcatccgatgaggtggggttgaggttcttgtcatggaggatgagttacttgggtcaaccaggggaaagaaggagacgattttcgtggattcttggagatggatgggcaccatttgatggatcagatggaacagccttgcttggtgaaattgatgtagcttttctagctgtttatgctataggaatgtacttttctggtcatttgggtgatagattaaatttgaggatttttttgactataggaatggtgggaacaggtgtgtttacttcgctgtttggaattgggtattggggaaacattcacagcttctattactaccttggggttcaaatgcttgctggtttgttccaatcgacggggtggccttcggtggttgcagtggttggtaattggtttgggaagaagaagagagggttgataatggggatatggaatgctcacacttctgttgggaacattactgggtctttggttgcttctgctttattgcaatatggatggggttggtcttttgtagtgcctggtttgatgattgctacaattggtgtggtggtttttcttttcttaccggttagtcctgagtctgtgggagttagcgaagaggatgaattagactctccaaagaaaagcggggcggaagagactgaaccattgttgacatcaagggcagaggtgaaggatcaacctgtggggttcattgaagcttggaaaattcctggtgttgctccttttgctctttgcctgttcttttccaaattggtggcttatacatttctctattggcttcctttctacattagccatacagctattgatgggcagtacttatcagatgcggcgtctggtaccttatcgacattgtttgatgtaggaggtgtgcttggaggaatccttgccggacatatttctgaccggttagatgctagagcaataacagctgctagtttcatgtattgtgctatccctgctctctttttataccggagctatggaagcatatccttgactgtaaacattatccttatgttcatcaccggcatgtttgttaacgggccatatgccctaataacaacggccgtctcagcagacctgggaacacatagctcgttgcgtggaaactcgagggcattggcaactgtaactgctattatcgatggaacaggctccgtaggggctgcaattggtccattggtaactggctacatttctgccgagagctggagtgcagttttcacaatgctgatgggagcagctctaattgcagggttgcttctaactaggcttgttatagccgaggtttctgcaaagatcgaagaatcaagaatgcgtagggggtctacttcaaggtctcaacctgctgtagttgatgtgtga
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

520

Amino Acids

56.14

Weight (kDa)

7.1

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1552
Acc65I GGTACC 1 cut(s) 1034
AccB1I GGYRCC 2 cut(s) 295, 1034
AccB7I CCANNNNNTGG 1 cut(s) 305
AccI GTMKAC 1 cut(s) 1526
AciI CCGC 4 cut(s) 147, 819, 824, 1025
AclWI GGATC 3 cut(s) 179, 316, 876
AcoI YGGCCR 1 cut(s) 1263
AcsI RAATTY 2 cut(s) 406, 900
AcyI GRCGYC 1 cut(s) 1028
AfaI GTAC 5 cut(s) 62, 178, 377, 1013, 1036
AfiI CCNNNNNNNGG 3 cut(s) 305, 544, 1407
AgeI ACCGGT 2 cut(s) 757, 1101
AgsI TTSAA 3 cut(s) 518, 890, 1533
AhlI ACTAGT 1 cut(s) 161
AjnI CCWGG 4 cut(s) 247, 709, 904, 1278
AjuI GAANNNNNNNTTGG 2 cut(s) 460, 492
AleI CACNNNNGTG 1 cut(s) 164
Alw26I GTCTC 5 cut(s) 14, 256, 824, 1273, 1542
AlwI GGATC 3 cut(s) 179, 316, 876
Ama87I CYCGRG 1 cut(s) 1309
AoxI GGCC 3 cut(s) 551, 1241, 1263
ApeKI GCWGC 3 cut(s) 1127, 1364, 1439
ApoI RAATTY 2 cut(s) 406, 900
AsiGI ACCGGT 2 cut(s) 757, 1101
Asp718I GGTACC 1 cut(s) 1034
AspS9I GGNCC 2 cut(s) 1241, 1373
AsuC2I CCSGG 1 cut(s) 151
AsuHPI GGTGA 4 cut(s) 344, 407, 874, 1213
AvaI CYCGRG 1 cut(s) 1309
AvaII GGWCC 1 cut(s) 1373
BaeGI GKGCMC 1 cut(s) 298
BanI GGYRCC 2 cut(s) 295, 1034
BarI GAAGNNNNNNTAC 2 cut(s) 68, 100
BbvI GCAGC 3 cut(s) 1114, 1351, 1451
BccI CCATC 8 cut(s) 281, 285, 299, 308, 681, 998, 1337, 1426
BceAI ACGGC 2 cut(s) 1250, 1278
BcgI CGANNNNNNTGC 2 cut(s) 1472, 1506
BciT130I CCWGG 4 cut(s) 249, 711, 906, 1280
BcnI CCSGG 1 cut(s) 151
BcoDI GTCTC 5 cut(s) 14, 256, 824, 1273, 1542
BcuI ACTAGT 1 cut(s) 161
BfaI CTAG 6 cut(s) 125, 162, 353, 1113, 1131, 1467
BfmI CTRYAG 3 cut(s) 366, 426, 1548
BfuAI ACCTGC 1 cut(s) 1552
BisI GCNGC 5 cut(s) 147, 1026, 1128, 1365, 1440
BlsI GCNGC 5 cut(s) 148, 1027, 1129, 1366, 1441
BmcAI AGTACT 2 cut(s) 178, 1013
Bme1390I CCNGG 5 cut(s) 151, 249, 711, 906, 1280
Bme18I GGWCC 1 cut(s) 1373
BmeT110I CYCGRG 1 cut(s) 1309
BmgT120I GGNCC 2 cut(s) 1241, 1373
BmiI GGNNCC 3 cut(s) 297, 1036, 1354
BmrFI CCNGG 5 cut(s) 151, 249, 711, 906, 1280
BmrI ACTGGG 1 cut(s) 660
BmsI GCATC 3 cut(s) 200, 1012, 1099
BmuI ACTGGG 1 cut(s) 660
BpmI CTGGAG 1 cut(s) 1429
BpuMI CCSGG 1 cut(s) 151
Bsa29I ATCGAT 1 cut(s) 1341
BsaHI GRCGYC 1 cut(s) 1028
BsaI GGTCTC 1 cut(s) 1542
BsaJI CCNNGG 5 cut(s) 39, 248, 508, 1279, 1482
BsaWI WCCGGW 3 cut(s) 757, 1101, 1170
BsaXI ACNNNNNCTCC 2 cut(s) 217, 247
Bsc4I CCNNNNNNNGG 3 cut(s) 305, 544, 1407
Bse118I RCCGGY 3 cut(s) 757, 1101, 1223
Bse1I ACTGG 2 cut(s) 655, 1390
BseBI CCWGG 4 cut(s) 249, 711, 906, 1280
BseCI ATCGAT 1 cut(s) 1341
BseDI CCNNGG 5 cut(s) 39, 248, 508, 1279, 1482
BseGI GGATG 5 cut(s) 191, 234, 296, 692, 799
BseLI CCNNNNNNNGG 3 cut(s) 305, 544, 1407
BseMII CTCAG 2 cut(s) 759, 1284
BseNI ACTGG 2 cut(s) 655, 1390
BseSI GKGCMC 1 cut(s) 298
BseX3I CGGCCG 1 cut(s) 1263
BseXI GCAGC 3 cut(s) 1114, 1351, 1451
BsgI GTGCAG 1 cut(s) 1434
Bsh1285I CGRYCG 1 cut(s) 1266
BshFI GGCC 3 cut(s) 553, 1243, 1265
BshNI GGYRCC 2 cut(s) 295, 1034
BshTI ACCGGT 2 cut(s) 757, 1101
BshVI ATCGAT 1 cut(s) 1341
BsiEI CGRYCG 1 cut(s) 1266
BsiHKCI CYCGRG 1 cut(s) 1309
BsiSI CCGG 6 cut(s) 151, 758, 1086, 1102, 1171, 1224
BslI CCNNNNNNNGG 3 cut(s) 305, 544, 1407
BsmAI GTCTC 5 cut(s) 14, 256, 824, 1273, 1542
BsmBI CGTCTC 2 cut(s) 256, 1273
BsmI GAATGC 2 cut(s) 628, 1518
BsnI GGCC 3 cut(s) 553, 1243, 1265
Bso31I GGTCTC 1 cut(s) 1542
BsoBI CYCGRG 1 cut(s) 1309
Bsp1286I GDGCHC 1 cut(s) 298
Bsp143I GATC 6 cut(s) 71, 111, 184, 308, 868, 1497
BspACI CCGC 4 cut(s) 147, 819, 824, 1025
BspANI GGCC 3 cut(s) 553, 1243, 1265
BspCNI CTCAG 2 cut(s) 760, 1283
BspDI ATCGAT 1 cut(s) 1341
BspLI GGNNCC 3 cut(s) 297, 1036, 1354
BspMI ACCTGC 1 cut(s) 1552
BspPI GGATC 3 cut(s) 179, 316, 876
BspT107I GGYRCC 2 cut(s) 295, 1034
BspTNI GGTCTC 1 cut(s) 1542
BsrFI RCCGGY 3 cut(s) 757, 1101, 1223
BsrI ACTGG 2 cut(s) 655, 1390
BssAI RCCGGY 3 cut(s) 757, 1101, 1223
BssECI CCNNGG 5 cut(s) 39, 248, 508, 1279, 1482
BssMI GATC 6 cut(s) 71, 111, 184, 308, 868, 1497
BssNI GRCGYC 1 cut(s) 1028
BssT1I CCWWGG 2 cut(s) 39, 508
Bst2UI CCWGG 4 cut(s) 249, 711, 906, 1280
Bst4CI ACNGT 2 cut(s) 1198, 1327
Bst6I CTCTTC 3 cut(s) 590, 783, 822
BstACI GRCGYC 1 cut(s) 1028
BstC8I GCNNGC 2 cut(s) 136, 525
BstDEI CTNAG 2 cut(s) 768, 1270
BstF5I GGATG 5 cut(s) 191, 234, 296, 692, 799
BstKTI GATC 6 cut(s) 74, 114, 187, 311, 871, 1500
BstMAI GTCTC 5 cut(s) 14, 256, 824, 1273, 1542
BstMBI GATC 6 cut(s) 71, 111, 184, 308, 868, 1497
BstMCI CGRYCG 1 cut(s) 1266
BstMWI GCNNNNNNNGC 8 cut(s) 353, 362, 920, 1124, 1154, 1182, 1271, 1448
BstNI CCWGG 4 cut(s) 249, 711, 906, 1280
BstNSI RCATGY 1 cut(s) 1231
BstSCI CCNGG 5 cut(s) 149, 247, 709, 904, 1278
BstSFI CTRYAG 3 cut(s) 366, 426, 1548
BstSLI GKGCMC 1 cut(s) 298
BstV1I GCAGC 3 cut(s) 1114, 1351, 1451
BstXI CCANNNNNNTGG 3 cut(s) 40, 166, 949
BstZI CGGCCG 1 cut(s) 1263
Bsu15I ATCGAT 1 cut(s) 1341
BsuRI GGCC 3 cut(s) 553, 1243, 1265
BsuTUI ATCGAT 1 cut(s) 1341
BtsCI GGATG 5 cut(s) 191, 234, 296, 692, 799
BtsI GCAGTG 1 cut(s) 573
BtsIMutI CAGTG 1 cut(s) 573
BveI ACCTGC 1 cut(s) 1552
Cac8I GCNNGC 2 cut(s) 136, 525
Cfr10I RCCGGY 3 cut(s) 757, 1101, 1223
Cfr13I GGNCC 2 cut(s) 1241, 1373
ClaI ATCGAT 1 cut(s) 1341
CseI GACGC 1 cut(s) 1017
Csp6I GTAC 5 cut(s) 61, 177, 376, 1012, 1035
CspAI ACCGGT 2 cut(s) 757, 1101
CspCI CAANNNNNGTGG 2 cut(s) 717, 752
CviAII CATG 4 cut(s) 143, 222, 1138, 1228
CviQI GTAC 5 cut(s) 61, 177, 376, 1012, 1035
DdeI CTNAG 2 cut(s) 768, 1270
DpnI GATC 6 cut(s) 73, 113, 186, 310, 870, 1499
DpnII GATC 6 cut(s) 71, 111, 184, 308, 868, 1497
EaeI YGGCCR 1 cut(s) 1263
EagI CGGCCG 1 cut(s) 1263
Eam1104I CTCTTC 3 cut(s) 590, 783, 822
EarI CTCTTC 3 cut(s) 590, 783, 822
EciI GGCGGA 1 cut(s) 839
EclXI CGGCCG 1 cut(s) 1263
Eco130I CCWWGG 2 cut(s) 39, 508
Eco31I GGTCTC 1 cut(s) 1542
Eco47I GGWCC 1 cut(s) 1373
Eco52I CGGCCG 1 cut(s) 1263
Eco88I CYCGRG 1 cut(s) 1309
EcoRII CCWGG 4 cut(s) 247, 709, 904, 1278
EcoT14I CCWWGG 2 cut(s) 39, 508
ErhI CCWWGG 2 cut(s) 39, 508
Esp3I CGTCTC 2 cut(s) 256, 1273
FaeI CATG 4 cut(s) 146, 225, 1141, 1231
FatI CATG 4 cut(s) 142, 221, 1137, 1227
FauI CCCGC 1 cut(s) 812
FauNDI CATATG 1 cut(s) 1246
FblI GTMKAC 1 cut(s) 1526
Fnu4HI GCNGC 5 cut(s) 147, 1026, 1128, 1365, 1440
FokI GGATG 5 cut(s) 178, 241, 303, 699, 806
Fsp4HI GCNGC 5 cut(s) 147, 1026, 1128, 1365, 1440
FspBI CTAG 6 cut(s) 125, 162, 353, 1113, 1131, 1467
GluI GCNGC 5 cut(s) 147, 1026, 1128, 1365, 1440
GsuI CTGGAG 1 cut(s) 1429
HaeIII GGCC 3 cut(s) 553, 1243, 1265
HapII CCGG 6 cut(s) 151, 758, 1086, 1102, 1171, 1224
HgaI GACGC 1 cut(s) 1017
Hin1I GRCGYC 1 cut(s) 1028
Hin1II CATG 4 cut(s) 146, 225, 1141, 1231
HincII GTYRAC 3 cut(s) 245, 846, 1237
HindII GTYRAC 3 cut(s) 245, 846, 1237
HindIII AAGCTT 1 cut(s) 891
HinfI GANTC 6 cut(s) 46, 277, 770, 803, 1077, 1505
HpaI GTTAAC 1 cut(s) 1237
HpaII CCGG 6 cut(s) 151, 758, 1086, 1102, 1171, 1224
HphI GGTGA 4 cut(s) 344, 407, 874, 1213
Hpy166II GTNNAC 6 cut(s) 245, 453, 846, 1201, 1237, 1527
Hpy188I TCNGA 4 cut(s) 196, 313, 1021, 1099
Hpy188III TCNNGA 4 cut(s) 172, 182, 767, 1509
Hpy8I GTNNAC 6 cut(s) 245, 453, 846, 1201, 1237, 1527
Hpy99I CGWCG 1 cut(s) 547
HpyAV CCTTC 3 cut(s) 252, 564, 859
HpyCH4III ACNGT 2 cut(s) 1198, 1327
HpyCH4V TGCA 8 cut(s) 134, 191, 566, 679, 1367, 1415, 1451, 1493
HpyF10VI GCNNNNNNNGC 8 cut(s) 353, 362, 920, 1124, 1154, 1182, 1271, 1448
HpyF3I CTNAG 2 cut(s) 768, 1270
Hsp92I GRCGYC 1 cut(s) 1028
Hsp92II CATG 4 cut(s) 146, 225, 1141, 1231
KpnI GGTACC 1 cut(s) 1038
KspAI GTTAAC 1 cut(s) 1237
Kzo9I GATC 6 cut(s) 71, 111, 184, 308, 868, 1497
LmnI GCTCC 5 cut(s) 11, 919, 1173, 1358, 1436
Lsp1109I GCAGC 3 cut(s) 1114, 1351, 1451
LweI GCATC 3 cut(s) 200, 1012, 1099
MaeI CTAG 6 cut(s) 125, 162, 353, 1113, 1131, 1467
MaeIII GTNAC 4 cut(s) 115, 233, 1327, 1381
MalI GATC 6 cut(s) 73, 113, 186, 310, 870, 1499
MboI GATC 6 cut(s) 71, 111, 184, 308, 868, 1497
MboII GAAGA 8 cut(s) 17, 88, 601, 604, 607, 800, 839, 1514
MfeI CAATTG 2 cut(s) 729, 1368
MhlI GDGCHC 1 cut(s) 298
MlyI GAGTC 2 cut(s) 779, 797
MseI TTAA 2 cut(s) 404, 1236
MslI CAYNNNNRTG 3 cut(s) 164, 393, 1226
MspA1I CMGCKG 1 cut(s) 1127
MspI CCGG 6 cut(s) 151, 758, 1086, 1102, 1171, 1224
MspR9I CCNGG 5 cut(s) 151, 249, 711, 906, 1280
MunI CAATTG 2 cut(s) 729, 1368
Mva1269I GAATGC 2 cut(s) 628, 1518
MvaI CCWGG 4 cut(s) 249, 711, 906, 1280
MwoI GCNNNNNNNGC 8 cut(s) 353, 362, 920, 1124, 1154, 1182, 1271, 1448
NciI CCSGG 1 cut(s) 151
NdeI CATATG 1 cut(s) 1246
NdeII GATC 6 cut(s) 71, 111, 184, 308, 868, 1497
NlaIII CATG 4 cut(s) 146, 225, 1141, 1231
NlaIV GGNNCC 3 cut(s) 297, 1036, 1354
NmeAIII GCCGAG 2 cut(s) 1426, 1507
NspI RCATGY 1 cut(s) 1231
OliI CACNNNNGTG 1 cut(s) 164
PaeR7I CTCGAG 1 cut(s) 1309
PctI GAATGC 2 cut(s) 628, 1518
PfeI GAWTC 4 cut(s) 46, 277, 1077, 1505
PflMI CCANNNNNTGG 1 cut(s) 305
PinAI ACCGGT 2 cut(s) 757, 1101
PkrI GCNGC 5 cut(s) 148, 1027, 1129, 1366, 1441
PleI GAGTC 2 cut(s) 778, 797
PpsI GAGTC 2 cut(s) 778, 797
Psp6I CCWGG 4 cut(s) 247, 709, 904, 1278
PspGI CCWGG 4 cut(s) 247, 709, 904, 1278
PspN4I GGNNCC 3 cut(s) 297, 1036, 1354
PspPI GGNCC 2 cut(s) 1241, 1373
PspXI VCTCGAGB 1 cut(s) 1309
PvuII CAGCTG 1 cut(s) 1127
RsaI GTAC 5 cut(s) 62, 178, 377, 1013, 1036
RsaNI GTAC 5 cut(s) 61, 177, 376, 1012, 1035
RseI CAYNNNNRTG 3 cut(s) 164, 393, 1226
SaqAI TTAA 2 cut(s) 404, 1236
SatI GCNGC 5 cut(s) 147, 1026, 1128, 1365, 1440
Sau3AI GATC 6 cut(s) 71, 111, 184, 308, 868, 1497
Sau96I GGNCC 2 cut(s) 1241, 1373
ScaI AGTACT 2 cut(s) 178, 1013
SchI GAGTC 2 cut(s) 779, 797
ScrFI CCNGG 5 cut(s) 151, 249, 711, 906, 1280
SduI GDGCHC 1 cut(s) 298
SfaNI GCATC 3 cut(s) 200, 1012, 1099
SfcI CTRYAG 3 cut(s) 366, 426, 1548
Sfr274I CTCGAG 1 cut(s) 1309
SinI GGWCC 1 cut(s) 1373
SlaI CTCGAG 1 cut(s) 1309
SmiMI CAYNNNNRTG 3 cut(s) 164, 393, 1226
SmlI CTYRAG 1 cut(s) 1309
SmoI CTYRAG 1 cut(s) 1309
SpeI ACTAGT 1 cut(s) 161
SsiI CCGC 4 cut(s) 147, 819, 824, 1025
SspMI CTAG 6 cut(s) 125, 162, 353, 1113, 1131, 1467
StyD4I CCNGG 5 cut(s) 149, 247, 709, 904, 1278
StyI CCWWGG 2 cut(s) 39, 508
TaaI ACNGT 2 cut(s) 1198, 1327
TaqI TCGA 7 cut(s) 49, 74, 542, 1043, 1310, 1341, 1500
TatI WGTACW 4 cut(s) 60, 176, 375, 1011
TauI GCSGC 2 cut(s) 149, 1028
TfiI GAWTC 4 cut(s) 46, 277, 1077, 1505
Tru1I TTAA 2 cut(s) 404, 1236
Tru9I TTAA 2 cut(s) 404, 1236
TscAI CASTG 1 cut(s) 573
TseI GCWGC 3 cut(s) 1127, 1364, 1439
TspDTI ATGAA 5 cut(s) 72, 810, 874, 1126, 1207
TspGWI ACGGA 1 cut(s) 1345
TspRI CASTG 1 cut(s) 573
Van91I CCANNNNNTGG 1 cut(s) 305
VpaK11BI GGWCC 1 cut(s) 1373
XapI RAATTY 2 cut(s) 406, 900
XceI RCATGY 1 cut(s) 1231
XhoI CTCGAG 1 cut(s) 1309
XmiI GTMKAC 1 cut(s) 1526
XspI CTAG 6 cut(s) 125, 162, 353, 1113, 1131, 1467
ZrmI AGTACT 2 cut(s) 178, 1013
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.