Protein of unknown function (DUF1645)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G15760 |
| fragaria_vesca | FvH4_2g06670 |
| malus_domestica | MD10G1090600.v1.1 |
| prunus_persica | Prupe.8G119300_v2.0.a1 |
| pyrus_communis | pycom05g06930 pycom10g07410 |
| rosa_chinensis | RchiOBHm_Chr6g0258711 |
| rosa_laevigata | RLG00000014587 |
| rosa_multiflora | Rmu_ssc0000014.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00206040 |
| rosa_rugosa | Rorug05G0583100 |
| rosa_samantha | Rh6AG099500 Rh6BG091200 Rh6CG088600 Rh6DG082800 |
| rosa_wichuraiana | Rw6G008640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 760 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 76 |
| Acc36I | ACCTGC | 1 cut(s) | 760 |
| AccB1I | GGYRCC | 1 cut(s) | 19 |
| AccI | GTMKAC | 3 cut(s) | 628, 959, 1007 |
| AccII | CGCG | 1 cut(s) | 517 |
| AciI | CCGC | 9 cut(s) | 72, 151, 333, 354, 515, 557, 1039, 1058, 1088 |
| AcoI | YGGCCR | 2 cut(s) | 307, 558 |
| AcsI | RAATTY | 2 cut(s) | 991, 1176 |
| AcuI | CTGAAG | 3 cut(s) | 94, 392, 896 |
| AcyI | GRCGYC | 1 cut(s) | 20 |
| AfaI | GTAC | 4 cut(s) | 65, 193, 474, 769 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 924, 1009 |
| AflIII | ACRYGT | 2 cut(s) | 391, 667 |
| AgeI | ACCGGT | 2 cut(s) | 132, 1048 |
| AgsI | TTSAA | 5 cut(s) | 37, 160, 223, 298, 681 |
| AhlI | ACTAGT | 1 cut(s) | 188 |
| AjiI | CACGTC | 3 cut(s) | 394, 632, 670 |
| AjnI | CCWGG | 2 cut(s) | 695, 1181 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 278, 310, 716, 748 |
| AluBI | AGCT | 7 cut(s) | 183, 323, 343, 780, 874, 1032, 1212 |
| AluI | AGCT | 7 cut(s) | 183, 323, 343, 780, 874, 1032, 1212 |
| Alw21I | GWGCWC | 1 cut(s) | 345 |
| Alw26I | GTCTC | 4 cut(s) | 516, 563, 658, 711 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 51 |
| Ama87I | CYCGRG | 3 cut(s) | 239, 255, 1033 |
| AoxI | GGCC | 2 cut(s) | 307, 558 |
| ApoI | RAATTY | 2 cut(s) | 991, 1176 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 23, 55, 716, 748 |
| AsiGI | ACCGGT | 2 cut(s) | 132, 1048 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 618, 658 |
| AspLEI | GCGC | 5 cut(s) | 22, 50, 116, 519, 902 |
| AspS9I | GGNCC | 3 cut(s) | 496, 1046, 1197 |
| AsuC2I | CCSGG | 8 cut(s) | 91, 240, 241, 256, 257, 420, 722, 1085 |
| AsuHPI | GGTGA | 2 cut(s) | 741, 1102 |
| AvaI | CYCGRG | 3 cut(s) | 239, 255, 1033 |
| AvaII | GGWCC | 3 cut(s) | 496, 1046, 1197 |
| BalI | TGGCCA | 1 cut(s) | 309 |
| BamHI | GGATCC | 4 cut(s) | 415, 422, 717, 931 |
| BanI | GGYRCC | 1 cut(s) | 19 |
| BanII | GRGCYC | 2 cut(s) | 86, 345 |
| BbsI | GAAGAC | 2 cut(s) | 129, 1118 |
| Bbv12I | GWGCWC | 1 cut(s) | 345 |
| BccI | CCATC | 1 cut(s) | 528 |
| BceAI | ACGGC | 5 cut(s) | 286, 367, 436, 570, 777 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 725, 759 |
| BciT130I | CCWGG | 2 cut(s) | 697, 1183 |
| BcnI | CCSGG | 8 cut(s) | 91, 240, 241, 256, 257, 420, 722, 1085 |
| BcoDI | GTCTC | 4 cut(s) | 516, 563, 658, 711 |
| BcuI | ACTAGT | 1 cut(s) | 188 |
| BfaI | CTAG | 1 cut(s) | 189 |
| BfoI | RGCGCY | 2 cut(s) | 23, 51 |
| BfuAI | ACCTGC | 1 cut(s) | 760 |
| BisI | GCNGC | 2 cut(s) | 558, 1058 |
| BlsI | GCNGC | 2 cut(s) | 559, 1059 |
| BmcAI | AGTACT | 2 cut(s) | 193, 474 |
| Bme18I | GGWCC | 3 cut(s) | 496, 1046, 1197 |
| BmeT110I | CYCGRG | 3 cut(s) | 239, 255, 1033 |
| BmgBI | CACGTC | 3 cut(s) | 394, 632, 670 |
| BmgT120I | GGNCC | 3 cut(s) | 496, 1046, 1197 |
| BmiI | GGNNCC | 7 cut(s) | 21, 417, 424, 694, 719, 933, 1198 |
| BmsI | GCATC | 2 cut(s) | 755, 911 |
| BpiI | GAAGAC | 2 cut(s) | 129, 1118 |
| BpmI | CTGGAG | 1 cut(s) | 335 |
| BpuEI | CTTGAG | 1 cut(s) | 302 |
| BpuMI | CCSGG | 8 cut(s) | 91, 240, 241, 256, 257, 420, 722, 1085 |
| BsaAI | YACGTR | 1 cut(s) | 1208 |
| BsaBI | GATNNNNATC | 1 cut(s) | 543 |
| BsaHI | GRCGYC | 1 cut(s) | 20 |
| BsaJI | CCNNGG | 9 cut(s) | 239, 255, 383, 443, 481, 561, 1162, 1182, 1200 |
| BsaWI | WCCGGW | 5 cut(s) | 25, 132, 431, 1002, 1048 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 568, 598 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 924, 1009 |
| Bse118I | RCCGGY | 2 cut(s) | 132, 1048 |
| Bse1I | ACTGG | 2 cut(s) | 154, 318 |
| Bse8I | GATNNNNATC | 1 cut(s) | 543 |
| BseBI | CCWGG | 2 cut(s) | 697, 1183 |
| BseDI | CCNNGG | 9 cut(s) | 239, 255, 383, 443, 481, 561, 1162, 1182, 1200 |
| BseJI | GATNNNNATC | 1 cut(s) | 543 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 924, 1009 |
| BseNI | ACTGG | 2 cut(s) | 154, 318 |
| BseRI | GAGGAG | 7 cut(s) | 46, 369, 372, 418, 581, 1112, 1120 |
| Bsh1236I | CGCG | 1 cut(s) | 517 |
| Bsh1285I | CGRYCG | 2 cut(s) | 449, 1007 |
| BshFI | GGCC | 2 cut(s) | 309, 560 |
| BshNI | GGYRCC | 1 cut(s) | 19 |
| BshTI | ACCGGT | 2 cut(s) | 132, 1048 |
| BsiEI | CGRYCG | 2 cut(s) | 449, 1007 |
| BsiHKAI | GWGCWC | 1 cut(s) | 345 |
| BsiHKCI | CYCGRG | 3 cut(s) | 239, 255, 1033 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 924, 1009 |
| BsmAI | GTCTC | 4 cut(s) | 516, 563, 658, 711 |
| BsmI | GAATGC | 1 cut(s) | 660 |
| BsnI | GGCC | 2 cut(s) | 309, 560 |
| BsoBI | CYCGRG | 3 cut(s) | 239, 255, 1033 |
| Bsp1286I | GDGCHC | 2 cut(s) | 86, 345 |
| Bsp143I | GATC | 9 cut(s) | 277, 360, 415, 422, 461, 544, 717, 880, 931 |
| Bsp19I | CCATGG | 2 cut(s) | 561, 1162 |
| BspACI | CCGC | 9 cut(s) | 72, 151, 333, 354, 515, 557, 1039, 1058, 1088 |
| BspANI | GGCC | 2 cut(s) | 309, 560 |
| BspFNI | CGCG | 1 cut(s) | 517 |
| BspLI | GGNNCC | 7 cut(s) | 21, 417, 424, 694, 719, 933, 1198 |
| BspMI | ACCTGC | 1 cut(s) | 760 |
| BspT107I | GGYRCC | 1 cut(s) | 19 |
| BsrFI | RCCGGY | 2 cut(s) | 132, 1048 |
| BsrI | ACTGG | 2 cut(s) | 154, 318 |
| BssAI | RCCGGY | 2 cut(s) | 132, 1048 |
| BssECI | CCNNGG | 9 cut(s) | 239, 255, 383, 443, 481, 561, 1162, 1182, 1200 |
| BssMI | GATC | 9 cut(s) | 277, 360, 415, 422, 461, 544, 717, 880, 931 |
| BssNI | GRCGYC | 1 cut(s) | 20 |
| BssT1I | CCWWGG | 4 cut(s) | 481, 561, 1162, 1200 |
| Bst2UI | CCWGG | 2 cut(s) | 697, 1183 |
| Bst4CI | ACNGT | 3 cut(s) | 447, 1078, 1117 |
| Bst6I | CTCTTC | 3 cut(s) | 482, 609, 829 |
| BstACI | GRCGYC | 1 cut(s) | 20 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 752, 1066 |
| BstBAI | YACGTR | 1 cut(s) | 1208 |
| BstC8I | GCNNGC | 3 cut(s) | 52, 333, 792 |
| BstDEI | CTNAG | 2 cut(s) | 179, 938 |
| BstDSI | CCRYGG | 3 cut(s) | 443, 561, 1162 |
| BstFNI | CGCG | 1 cut(s) | 517 |
| BstH2I | RGCGCY | 2 cut(s) | 23, 51 |
| BstHHI | GCGC | 5 cut(s) | 22, 50, 116, 519, 902 |
| BstKTI | GATC | 9 cut(s) | 280, 363, 418, 425, 464, 547, 720, 883, 934 |
| BstMAI | GTCTC | 4 cut(s) | 516, 563, 658, 711 |
| BstMBI | GATC | 9 cut(s) | 277, 360, 415, 422, 461, 544, 717, 880, 931 |
| BstMCI | CGRYCG | 2 cut(s) | 449, 1007 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 17, 373, 752, 761, 1029, 1066 |
| BstNI | CCWGG | 2 cut(s) | 697, 1183 |
| BstUI | CGCG | 1 cut(s) | 517 |
| BstV2I | GAAGAC | 2 cut(s) | 129, 1118 |
| BstX2I | RGATCY | 5 cut(s) | 415, 422, 717, 880, 931 |
| BstYI | RGATCY | 5 cut(s) | 415, 422, 717, 880, 931 |
| BsuRI | GGCC | 2 cut(s) | 309, 560 |
| BtgI | CCRYGG | 3 cut(s) | 443, 561, 1162 |
| BtrI | CACGTC | 3 cut(s) | 394, 632, 670 |
| BtsIMutI | CAGTG | 2 cut(s) | 310, 1074 |
| BveI | ACCTGC | 1 cut(s) | 760 |
| Cac8I | GCNNGC | 3 cut(s) | 52, 333, 792 |
| CaiI | CAGNNNCTG | 1 cut(s) | 51 |
| CfoI | GCGC | 5 cut(s) | 22, 50, 116, 519, 902 |
| Cfr10I | RCCGGY | 2 cut(s) | 132, 1048 |
| Cfr13I | GGNCC | 3 cut(s) | 496, 1046, 1197 |
| Cfr9I | CCCGGG | 2 cut(s) | 239, 255 |
| CsiI | ACCWGGT | 1 cut(s) | 695 |
| Csp6I | GTAC | 4 cut(s) | 64, 192, 473, 768 |
| CspAI | ACCGGT | 2 cut(s) | 132, 1048 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 286, 321 |
| CviAII | CATG | 5 cut(s) | 562, 730, 1133, 1163, 1172 |
| CviQI | GTAC | 4 cut(s) | 64, 192, 473, 768 |
| DdeI | CTNAG | 2 cut(s) | 179, 938 |
| DinI | GGCGCC | 1 cut(s) | 21 |
| DpnI | GATC | 9 cut(s) | 279, 362, 417, 424, 463, 546, 719, 882, 933 |
| DpnII | GATC | 9 cut(s) | 277, 360, 415, 422, 461, 544, 717, 880, 931 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 76 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 76 |
| EaeI | YGGCCR | 2 cut(s) | 307, 558 |
| Eam1104I | CTCTTC | 3 cut(s) | 482, 609, 829 |
| EarI | CTCTTC | 3 cut(s) | 482, 609, 829 |
| EciI | GGCGGA | 1 cut(s) | 1054 |
| Ecl136II | GAGCTC | 1 cut(s) | 343 |
| Eco130I | CCWWGG | 4 cut(s) | 481, 561, 1162, 1200 |
| Eco24I | GRGCYC | 2 cut(s) | 86, 345 |
| Eco47I | GGWCC | 3 cut(s) | 496, 1046, 1197 |
| Eco53kI | GAGCTC | 1 cut(s) | 343 |
| Eco57I | CTGAAG | 3 cut(s) | 94, 392, 896 |
| Eco88I | CYCGRG | 3 cut(s) | 239, 255, 1033 |
| EcoICRI | GAGCTC | 1 cut(s) | 343 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1197 |
| EcoRI | GAATTC | 1 cut(s) | 991 |
| EcoRII | CCWGG | 2 cut(s) | 695, 1181 |
| EcoT14I | CCWWGG | 4 cut(s) | 481, 561, 1162, 1200 |
| EcoT38I | GRGCYC | 2 cut(s) | 86, 345 |
| EgeI | GGCGCC | 1 cut(s) | 21 |
| EheI | GGCGCC | 1 cut(s) | 21 |
| ErhI | CCWWGG | 4 cut(s) | 481, 561, 1162, 1200 |
| FaeI | CATG | 5 cut(s) | 565, 733, 1136, 1166, 1175 |
| FaiI | YATR | 8 cut(s) | 478, 563, 600, 731, 974, 1134, 1164, 1173 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 29, 869, 901 |
| FatI | CATG | 5 cut(s) | 561, 729, 1132, 1162, 1171 |
| FauI | CCCGC | 2 cut(s) | 340, 347 |
| FblI | GTMKAC | 3 cut(s) | 628, 959, 1007 |
| Fnu4HI | GCNGC | 2 cut(s) | 558, 1058 |
| FriOI | GRGCYC | 2 cut(s) | 86, 345 |
| Fsp4HI | GCNGC | 2 cut(s) | 558, 1058 |
| FspBI | CTAG | 1 cut(s) | 189 |
| GlaI | GCGC | 5 cut(s) | 21, 49, 115, 518, 901 |
| GluI | GCNGC | 2 cut(s) | 558, 1058 |
| GsuI | CTGGAG | 1 cut(s) | 335 |
| HaeII | RGCGCY | 2 cut(s) | 23, 51 |
| HaeIII | GGCC | 2 cut(s) | 309, 560 |
| HhaI | GCGC | 5 cut(s) | 22, 50, 116, 519, 902 |
| Hin1I | GRCGYC | 1 cut(s) | 20 |
| Hin1II | CATG | 5 cut(s) | 565, 733, 1136, 1166, 1175 |
| Hin6I | GCGC | 5 cut(s) | 20, 48, 114, 517, 900 |
| HinP1I | GCGC | 5 cut(s) | 20, 48, 114, 517, 900 |
| HincII | GTYRAC | 4 cut(s) | 629, 673, 960, 1008 |
| HindII | GTYRAC | 4 cut(s) | 629, 673, 960, 1008 |
| HindIII | AAGCTT | 1 cut(s) | 321 |
| HinfI | GANTC | 4 cut(s) | 244, 539, 571, 625 |
| HphI | GGTGA | 2 cut(s) | 741, 1102 |
| Hpy166II | GTNNAC | 7 cut(s) | 31, 629, 673, 859, 960, 1008, 1081 |
| Hpy188III | TCNNGA | 5 cut(s) | 281, 468, 651, 663, 850 |
| Hpy8I | GTNNAC | 7 cut(s) | 31, 629, 673, 859, 960, 1008, 1081 |
| Hpy99I | CGWCG | 7 cut(s) | 82, 278, 457, 633, 763, 925, 1012 |
| HpyAV | CCTTC | 7 cut(s) | 154, 216, 669, 810, 871, 902, 922 |
| HpyCH4III | ACNGT | 3 cut(s) | 447, 1078, 1117 |
| HpyCH4IV | ACGT | 5 cut(s) | 393, 631, 669, 741, 1207 |
| HpyCH4V | TGCA | 3 cut(s) | 746, 1069, 1171 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 17, 373, 752, 761, 1029, 1066 |
| HpyF3I | CTNAG | 2 cut(s) | 179, 938 |
| HpySE526I | ACGT | 5 cut(s) | 393, 631, 669, 741, 1207 |
| Hsp92I | GRCGYC | 1 cut(s) | 20 |
| Hsp92II | CATG | 5 cut(s) | 565, 733, 1136, 1166, 1175 |
| HspAI | GCGC | 5 cut(s) | 20, 48, 114, 517, 900 |
| KasI | GGCGCC | 1 cut(s) | 19 |
| Kzo9I | GATC | 9 cut(s) | 277, 360, 415, 422, 461, 544, 717, 880, 931 |
| LmnI | GCTCC | 3 cut(s) | 59, 760, 897 |
| LweI | GCATC | 2 cut(s) | 755, 911 |
| MabI | ACCWGGT | 1 cut(s) | 695 |
| MaeI | CTAG | 1 cut(s) | 189 |
| MaeII | ACGT | 5 cut(s) | 393, 631, 669, 741, 1207 |
| MaeIII | GTNAC | 2 cut(s) | 584, 1090 |
| MalI | GATC | 9 cut(s) | 279, 362, 417, 424, 463, 546, 719, 882, 933 |
| MboI | GATC | 9 cut(s) | 277, 360, 415, 422, 461, 544, 717, 880, 931 |
| MflI | RGATCY | 5 cut(s) | 415, 422, 717, 880, 931 |
| MhlI | GDGCHC | 2 cut(s) | 86, 345 |
| MlsI | TGGCCA | 1 cut(s) | 309 |
| MluCI | AATT | 3 cut(s) | 298, 991, 1176 |
| MluNI | TGGCCA | 1 cut(s) | 309 |
| Mly113I | GGCGCC | 1 cut(s) | 20 |
| MlyI | GAGTC | 2 cut(s) | 565, 634 |
| MmeI | TCCRAC | 2 cut(s) | 782, 957 |
| Mox20I | TGGCCA | 1 cut(s) | 309 |
| MroXI | GAANNNNTTC | 2 cut(s) | 618, 658 |
| MscI | TGGCCA | 1 cut(s) | 309 |
| MseI | TTAA | 1 cut(s) | 1158 |
| Msp20I | TGGCCA | 1 cut(s) | 309 |
| Mva1269I | GAATGC | 1 cut(s) | 660 |
| MvaI | CCWGG | 2 cut(s) | 697, 1183 |
| MvnI | CGCG | 1 cut(s) | 517 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 17, 373, 752, 761, 1029, 1066 |
| NarI | GGCGCC | 1 cut(s) | 20 |
| NciI | CCSGG | 8 cut(s) | 91, 240, 241, 256, 257, 420, 722, 1085 |
| NcoI | CCATGG | 2 cut(s) | 561, 1162 |
| NdeII | GATC | 9 cut(s) | 277, 360, 415, 422, 461, 544, 717, 880, 931 |
| NlaIII | CATG | 5 cut(s) | 565, 733, 1136, 1166, 1175 |
| NlaIV | GGNNCC | 7 cut(s) | 21, 417, 424, 694, 719, 933, 1198 |
| NmeAIII | GCCGAG | 2 cut(s) | 364, 483 |
| NmuCI | GTSAC | 1 cut(s) | 1090 |
| PaeR7I | CTCGAG | 1 cut(s) | 1033 |
| PaqCI | CACCTGC | 1 cut(s) | 760 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 455, 956, 1031 |
| PctI | GAATGC | 1 cut(s) | 660 |
| PdmI | GAANNNNTTC | 2 cut(s) | 618, 658 |
| PfeI | GAWTC | 2 cut(s) | 244, 539 |
| PfoI | TCCNGGA | 2 cut(s) | 418, 720 |
| PinAI | ACCGGT | 2 cut(s) | 132, 1048 |
| PkrI | GCNGC | 2 cut(s) | 559, 1059 |
| PleI | GAGTC | 2 cut(s) | 565, 633 |
| PluTI | GGCGCC | 1 cut(s) | 23 |
| PpsI | GAGTC | 2 cut(s) | 565, 633 |
| Ppu21I | YACGTR | 1 cut(s) | 1208 |
| PpuMI | RGGWCCY | 1 cut(s) | 1197 |
| Psp124BI | GAGCTC | 1 cut(s) | 345 |
| Psp5II | RGGWCCY | 1 cut(s) | 1197 |
| Psp6I | CCWGG | 2 cut(s) | 695, 1181 |
| PspGI | CCWGG | 2 cut(s) | 695, 1181 |
| PspN4I | GGNNCC | 7 cut(s) | 21, 417, 424, 694, 719, 933, 1198 |
| PspPI | GGNCC | 3 cut(s) | 496, 1046, 1197 |
| PspPPI | RGGWCCY | 1 cut(s) | 1197 |
| PspXI | VCTCGAGB | 1 cut(s) | 1033 |
| PstNI | CAGNNNCTG | 1 cut(s) | 51 |
| PsuI | RGATCY | 5 cut(s) | 415, 422, 717, 880, 931 |
| RsaI | GTAC | 4 cut(s) | 65, 193, 474, 769 |
| RsaNI | GTAC | 4 cut(s) | 64, 192, 473, 768 |
| SacI | GAGCTC | 1 cut(s) | 345 |
| SalI | GTCGAC | 3 cut(s) | 627, 958, 1006 |
| SaqAI | TTAA | 1 cut(s) | 1158 |
| SatI | GCNGC | 2 cut(s) | 558, 1058 |
| Sau3AI | GATC | 9 cut(s) | 277, 360, 415, 422, 461, 544, 717, 880, 931 |
| Sau96I | GGNCC | 3 cut(s) | 496, 1046, 1197 |
| ScaI | AGTACT | 2 cut(s) | 193, 474 |
| SchI | GAGTC | 2 cut(s) | 565, 634 |
| SduI | GDGCHC | 2 cut(s) | 86, 345 |
| SexAI | ACCWGGT | 1 cut(s) | 695 |
| SfaNI | GCATC | 2 cut(s) | 755, 911 |
| SfoI | GGCGCC | 1 cut(s) | 21 |
| Sfr274I | CTCGAG | 1 cut(s) | 1033 |
| SinI | GGWCC | 3 cut(s) | 496, 1046, 1197 |
| SlaI | CTCGAG | 1 cut(s) | 1033 |
| SmaI | CCCGGG | 2 cut(s) | 241, 257 |
| SmlI | CTYRAG | 2 cut(s) | 281, 1033 |
| SmoI | CTYRAG | 2 cut(s) | 281, 1033 |
| SpeI | ACTAGT | 1 cut(s) | 188 |
| Sse9I | AATT | 3 cut(s) | 298, 991, 1176 |
| SsiI | CCGC | 9 cut(s) | 72, 151, 333, 354, 515, 557, 1039, 1058, 1088 |
| SspDI | GGCGCC | 1 cut(s) | 19 |
| SspMI | CTAG | 1 cut(s) | 189 |
| SstI | GAGCTC | 1 cut(s) | 345 |
| StyI | CCWWGG | 4 cut(s) | 481, 561, 1162, 1200 |
| TaaI | ACNGT | 3 cut(s) | 447, 1078, 1117 |
| TaiI | ACGT | 5 cut(s) | 396, 634, 672, 744, 1210 |
| TasI | AATT | 3 cut(s) | 298, 991, 1176 |
| TatI | WGTACW | 2 cut(s) | 191, 472 |
| TauI | GCSGC | 2 cut(s) | 560, 1060 |
| TfiI | GAWTC | 2 cut(s) | 244, 539 |
| Tru1I | TTAA | 1 cut(s) | 1158 |
| Tru9I | TTAA | 1 cut(s) | 1158 |
| TscAI | CASTG | 2 cut(s) | 310, 1081 |
| TseFI | GTSAC | 1 cut(s) | 1090 |
| Tsp45I | GTSAC | 1 cut(s) | 1090 |
| TspDTI | ATGAA | 3 cut(s) | 17, 609, 1188 |
| TspGWI | ACGGA | 3 cut(s) | 699, 1025, 1109 |
| TspMI | CCCGGG | 2 cut(s) | 239, 255 |
| TspRI | CASTG | 2 cut(s) | 310, 1081 |
| VpaK11BI | GGWCC | 3 cut(s) | 496, 1046, 1197 |
| XapI | RAATTY | 2 cut(s) | 991, 1176 |
| XhoI | CTCGAG | 1 cut(s) | 1033 |
| XmaI | CCCGGG | 2 cut(s) | 239, 255 |
| XmiI | GTMKAC | 3 cut(s) | 628, 959, 1007 |
| XmnI | GAANNNNTTC | 2 cut(s) | 618, 658 |
| XspI | CTAG | 1 cut(s) | 189 |
| ZrmI | AGTACT | 2 cut(s) | 193, 474 |