Rroxscaffold_7G00206040

Protein of unknown function (DUF1645)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0015064
Physical Location & Seq
Forward (+)
55711629 .. 55712843
1215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00206040.1

Sequence Viewer

Length: 1215 bp
ATGAAAGTAGCACTTCCGGCGCCTCCGGTGGACTTCAACTTCGACAGCGCCTGCTCCTCCCCTTACTTGACCGCCCCGTCGAGCCCCACCCGGTTCGGCAACTGCTACTTCAGCGCACCCACCAGCCCCAACCGGTCTTCCTCCTTTTACCGCCAGTTCAACGACTTCGACTACAATCTTAGCTCTACTAGTACTAAATACTCCCCTTCCTCTATCCCTTTCAAGTGGGAAGAAAAGCCCGGGATTCCGAAATCTCGGGCTACAATCAACGGCGACGATCTTGAAGATTTCGAGTTCAATTTCAGTGGCCAACTGGAGAAAGCTTCTTTGCCCGCAGATGAGCTCTTTGACGGCGGGAAGATCAAGCCTCTGAAGCCTCCTCCTCGGCTACACGTCAGCACTAATAGAAAGCAGGATCCGGGATCCTCCTCCGGTTTATCTCCACGGTCGCCGTCGCCGAGATCATCGAGAGTACTATGCCAAGGGAAGAGAATGGTCCAAGACGTGTTGTCTCCGCGCCATCTTCACAGAAAGGTCGATTCCGATCCTTTCACGGCGGCCATGGAGGAGACTCGGAGAGATTGTTACAGAGATGAATATGACCACGCAGAAGAAGAGTTTCAGAGTCGACGTGGTAGGGAAAGAATGTCGAGAATGCCTTCGAGACACGTCAACGCTTCAATCCGAAAAGGAACCAGGTCTTTGTCTCCGTTGAGGATTCCGGACATCATGTTCGATGACGTTGCATCACCTGCTCCGACGACGAGTACCTCTAACAGCTCAATCAAGCCAGCCACTCCTTCTTCTATTTCTTCGGCTTACTCTTCGATATTATCAGCGATTTCGTTCTCGAAAGTGAACAAGAAGTGGAAGCTGAAAGATCTCTTGTTGTTCCGGAGCGCATCGGAAGGTAGAGCCACGACGGGGAAGGATCCTCTAAGGAAGTATTCGCTTTTGTCGACAAAGAAAAGTATGTCGGAAGATGTGAAGAATTCTAGTTTCCGGTCGACGGACAGCGTTGGCTCGGTTAGCTCGAGGCGGAGAGGACCGGTTTCGCCGCACGAACTGCATTACACGGTGAACCGGGCGGTGACGGAGGAGATGAGGAGGAAGACCGTGTTGCCCTACAAACATGGGCTGTTGGGTTGCTTGGGGTTTAACCATGGGTTGCATGAAATTTCCAGGGGCGCTTTTGGGTCCTTGGCGCGTAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1645

Protein Analysis

404

Amino Acids

44.95

Weight (kDa)

9.81

Isoelectric Point (pI)

69.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1645 PF07816 112 - 375 6.7e-47 Protein of unknown function (DUF1645)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015064)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15760
fragaria_vesca FvH4_2g06670
malus_domestica MD10G1090600.v1.1
prunus_persica Prupe.8G119300_v2.0.a1
pyrus_communis pycom05g06930 pycom10g07410
rosa_chinensis RchiOBHm_Chr6g0258711
rosa_laevigata RLG00000014587
rosa_multiflora Rmu_ssc0000014.1_g000003
rosa_roxburghii Rroxscaffold_7G00206040
rosa_rugosa Rorug05G0583100
rosa_samantha Rh6AG099500 Rh6BG091200 Rh6CG088600 Rh6DG082800
rosa_wichuraiana Rw6G008640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 760
AasI GACNNNNNNGTC 1 cut(s) 76
Acc36I ACCTGC 1 cut(s) 760
AccB1I GGYRCC 1 cut(s) 19
AccI GTMKAC 3 cut(s) 628, 959, 1007
AccII CGCG 2 cut(s) 517, 1207
AccIII TCCGGA 2 cut(s) 721, 894
AciI CCGC 9 cut(s) 72, 151, 333, 354, 515, 557, 1039, 1058, 1088
AclWI GGATC 7 cut(s) 410, 417, 423, 430, 539, 926, 939
AcoI YGGCCR 2 cut(s) 307, 558
AcsI RAATTY 2 cut(s) 991, 1176
AcuI CTGAAG 2 cut(s) 94, 392
AcyI GRCGYC 1 cut(s) 20
AfaI GTAC 3 cut(s) 193, 474, 769
AfiI CCNNNNNNNGG 2 cut(s) 924, 1009
AflIII ACRYGT 3 cut(s) 391, 504, 667
AgeI ACCGGT 2 cut(s) 132, 1048
AgsI TTSAA 6 cut(s) 37, 160, 223, 284, 298, 681
AhdI GACNNNNNGTC 1 cut(s) 508
AhlI ACTAGT 1 cut(s) 188
AjiI CACGTC 4 cut(s) 394, 505, 632, 670
AjnI CCWGG 2 cut(s) 695, 1181
AloI GAACNNNNNNTCC 2 cut(s) 716, 748
AluBI AGCT 7 cut(s) 183, 323, 343, 780, 874, 1032, 1212
AluI AGCT 7 cut(s) 183, 323, 343, 780, 874, 1032, 1212
Alw21I GWGCWC 1 cut(s) 345
Alw26I GTCTC 4 cut(s) 516, 563, 658, 711
AlwI GGATC 7 cut(s) 410, 417, 423, 430, 539, 926, 939
AlwNI CAGNNNCTG 1 cut(s) 51
Ama87I CYCGRG 3 cut(s) 239, 255, 1033
Aor13HI TCCGGA 2 cut(s) 721, 894
AoxI GGCC 2 cut(s) 307, 558
ApoI RAATTY 2 cut(s) 991, 1176
ArsI GACNNNNNNTTYG 4 cut(s) 23, 55, 716, 748
AsiGI ACCGGT 2 cut(s) 132, 1048
Asp700I GAANNNNTTC 2 cut(s) 618, 658
AspLEI GCGC 7 cut(s) 22, 50, 116, 519, 902, 1190, 1207
AspS9I GGNCC 3 cut(s) 496, 1046, 1197
AsuC2I CCSGG 5 cut(s) 91, 240, 241, 420, 1085
AsuHPI GGTGA 3 cut(s) 741, 1090, 1102
AvaI CYCGRG 3 cut(s) 239, 255, 1033
AvaII GGWCC 3 cut(s) 496, 1046, 1197
BalI TGGCCA 1 cut(s) 309
BamHI GGATCC 3 cut(s) 415, 422, 931
BanI GGYRCC 1 cut(s) 19
BanII GRGCYC 2 cut(s) 86, 345
BbsI GAAGAC 2 cut(s) 129, 1118
Bbv12I GWGCWC 1 cut(s) 345
BccI CCATC 1 cut(s) 528
BceAI ACGGC 4 cut(s) 286, 367, 436, 570
BcgI CGANNNNNNTGC 2 cut(s) 725, 759
BciT130I CCWGG 2 cut(s) 697, 1183
BcnI CCSGG 5 cut(s) 91, 240, 241, 420, 1085
BcoDI GTCTC 4 cut(s) 516, 563, 658, 711
BcuI ACTAGT 1 cut(s) 188
BfaI CTAG 2 cut(s) 189, 996
BfoI RGCGCY 3 cut(s) 23, 51, 1191
BfuAI ACCTGC 1 cut(s) 760
BglII AGATCT 1 cut(s) 880
BisI GCNGC 2 cut(s) 558, 1058
BlsI GCNGC 2 cut(s) 559, 1059
BmcAI AGTACT 2 cut(s) 193, 474
Bme1390I CCNGG 7 cut(s) 91, 240, 241, 420, 697, 1085, 1183
Bme18I GGWCC 3 cut(s) 496, 1046, 1197
BmeRI GACNNNNNGTC 1 cut(s) 508
BmeT110I CYCGRG 3 cut(s) 239, 255, 1033
BmgBI CACGTC 4 cut(s) 394, 505, 632, 670
BmgT120I GGNCC 3 cut(s) 496, 1046, 1197
BmiI GGNNCC 6 cut(s) 21, 417, 424, 694, 933, 1198
BmrFI CCNGG 7 cut(s) 91, 240, 241, 420, 697, 1085, 1183
BmsI GCATC 2 cut(s) 755, 911
BpiI GAAGAC 2 cut(s) 129, 1118
BpmI CTGGAG 1 cut(s) 335
BpuMI CCSGG 5 cut(s) 91, 240, 241, 420, 1085
BsaBI GATNNNNATC 1 cut(s) 543
BsaHI GRCGYC 1 cut(s) 20
BsaJI CCNNGG 8 cut(s) 239, 383, 443, 481, 561, 1162, 1182, 1200
BsaWI WCCGGW 7 cut(s) 25, 132, 431, 721, 894, 1002, 1048
BsaXI ACNNNNNCTCC 2 cut(s) 568, 598
Bsc4I CCNNNNNNNGG 2 cut(s) 924, 1009
Bse118I RCCGGY 2 cut(s) 132, 1048
Bse1I ACTGG 2 cut(s) 154, 318
Bse8I GATNNNNATC 1 cut(s) 543
BseAI TCCGGA 2 cut(s) 721, 894
BseBI CCWGG 2 cut(s) 697, 1183
BseDI CCNNGG 8 cut(s) 239, 383, 443, 481, 561, 1162, 1182, 1200
BseJI GATNNNNATC 1 cut(s) 543
BseLI CCNNNNNNNGG 2 cut(s) 924, 1009
BseNI ACTGG 2 cut(s) 154, 318
BseRI GAGGAG 7 cut(s) 46, 369, 372, 418, 581, 1112, 1120
Bsh1236I CGCG 2 cut(s) 517, 1207
Bsh1285I CGRYCG 2 cut(s) 449, 1007
BshFI GGCC 2 cut(s) 309, 560
BshNI GGYRCC 1 cut(s) 19
BshTI ACCGGT 2 cut(s) 132, 1048
BsiEI CGRYCG 2 cut(s) 449, 1007
BsiHKAI GWGCWC 1 cut(s) 345
BsiHKCI CYCGRG 3 cut(s) 239, 255, 1033
BslI CCNNNNNNNGG 2 cut(s) 924, 1009
BsmAI GTCTC 4 cut(s) 516, 563, 658, 711
BsmI GAATGC 1 cut(s) 660
BsnI GGCC 2 cut(s) 309, 560
BsoBI CYCGRG 3 cut(s) 239, 255, 1033
Bsp1286I GDGCHC 2 cut(s) 86, 345
Bsp13I TCCGGA 2 cut(s) 721, 894
Bsp143I GATC 8 cut(s) 277, 360, 415, 422, 461, 544, 880, 931
Bsp19I CCATGG 2 cut(s) 561, 1162
BspACI CCGC 9 cut(s) 72, 151, 333, 354, 515, 557, 1039, 1058, 1088
BspANI GGCC 2 cut(s) 309, 560
BspEI TCCGGA 2 cut(s) 721, 894
BspFNI CGCG 2 cut(s) 517, 1207
BspLI GGNNCC 6 cut(s) 21, 417, 424, 694, 933, 1198
BspMI ACCTGC 1 cut(s) 760
BspPI GGATC 7 cut(s) 410, 417, 423, 430, 539, 926, 939
BspT107I GGYRCC 1 cut(s) 19
BsrFI RCCGGY 2 cut(s) 132, 1048
BsrI ACTGG 2 cut(s) 154, 318
BssAI RCCGGY 2 cut(s) 132, 1048
BssECI CCNNGG 8 cut(s) 239, 383, 443, 481, 561, 1162, 1182, 1200
BssMI GATC 8 cut(s) 277, 360, 415, 422, 461, 544, 880, 931
BssNI GRCGYC 1 cut(s) 20
BssT1I CCWWGG 4 cut(s) 481, 561, 1162, 1200
Bst2UI CCWGG 2 cut(s) 697, 1183
Bst4CI ACNGT 3 cut(s) 447, 1078, 1117
Bst6I CTCTTC 3 cut(s) 482, 609, 829
BstACI GRCGYC 1 cut(s) 20
BstAPI GCANNNNNTGC 2 cut(s) 752, 1066
BstC8I GCNNGC 3 cut(s) 52, 333, 792
BstDEI CTNAG 2 cut(s) 179, 938
BstDSI CCRYGG 3 cut(s) 443, 561, 1162
BstFNI CGCG 2 cut(s) 517, 1207
BstH2I RGCGCY 3 cut(s) 23, 51, 1191
BstHHI GCGC 7 cut(s) 22, 50, 116, 519, 902, 1190, 1207
BstKTI GATC 8 cut(s) 280, 363, 418, 425, 464, 547, 883, 934
BstMAI GTCTC 4 cut(s) 516, 563, 658, 711
BstMBI GATC 8 cut(s) 277, 360, 415, 422, 461, 544, 880, 931
BstMCI CGRYCG 2 cut(s) 449, 1007
BstMWI GCNNNNNNNGC 6 cut(s) 17, 111, 373, 752, 1029, 1066
BstNI CCWGG 2 cut(s) 697, 1183
BstSCI CCNGG 7 cut(s) 89, 238, 239, 418, 695, 1083, 1181
BstUI CGCG 2 cut(s) 517, 1207
BstV2I GAAGAC 2 cut(s) 129, 1118
BstX2I RGATCY 4 cut(s) 415, 422, 880, 931
BstYI RGATCY 4 cut(s) 415, 422, 880, 931
BsuRI GGCC 2 cut(s) 309, 560
BtgI CCRYGG 3 cut(s) 443, 561, 1162
BtrI CACGTC 4 cut(s) 394, 505, 632, 670
BtsIMutI CAGTG 1 cut(s) 310
BveI ACCTGC 1 cut(s) 760
Cac8I GCNNGC 3 cut(s) 52, 333, 792
CaiI CAGNNNCTG 1 cut(s) 51
CfoI GCGC 7 cut(s) 22, 50, 116, 519, 902, 1190, 1207
Cfr10I RCCGGY 2 cut(s) 132, 1048
Cfr13I GGNCC 3 cut(s) 496, 1046, 1197
Cfr9I CCCGGG 1 cut(s) 239
CsiI ACCWGGT 1 cut(s) 695
Csp6I GTAC 3 cut(s) 192, 473, 768
CspAI ACCGGT 2 cut(s) 132, 1048
CspCI CAANNNNNGTGG 2 cut(s) 286, 321
CviAII CATG 5 cut(s) 562, 730, 1133, 1163, 1172
CviQI GTAC 3 cut(s) 192, 473, 768
DdeI CTNAG 2 cut(s) 179, 938
DinI GGCGCC 1 cut(s) 21
DpnI GATC 8 cut(s) 279, 362, 417, 424, 463, 546, 882, 933
DpnII GATC 8 cut(s) 277, 360, 415, 422, 461, 544, 880, 931
DrdI GACNNNNNNGTC 1 cut(s) 76
DriI GACNNNNNGTC 1 cut(s) 508
DseDI GACNNNNNNGTC 1 cut(s) 76
EaeI YGGCCR 2 cut(s) 307, 558
Eam1104I CTCTTC 3 cut(s) 482, 609, 829
Eam1105I GACNNNNNGTC 1 cut(s) 508
EarI CTCTTC 3 cut(s) 482, 609, 829
EciI GGCGGA 1 cut(s) 1054
Ecl136II GAGCTC 1 cut(s) 343
Eco130I CCWWGG 4 cut(s) 481, 561, 1162, 1200
Eco24I GRGCYC 2 cut(s) 86, 345
Eco47I GGWCC 3 cut(s) 496, 1046, 1197
Eco53kI GAGCTC 1 cut(s) 343
Eco57I CTGAAG 2 cut(s) 94, 392
Eco88I CYCGRG 3 cut(s) 239, 255, 1033
EcoICRI GAGCTC 1 cut(s) 343
EcoO109I RGGNCCY 1 cut(s) 1197
EcoRI GAATTC 1 cut(s) 991
EcoRII CCWGG 2 cut(s) 695, 1181
EcoT14I CCWWGG 4 cut(s) 481, 561, 1162, 1200
EcoT38I GRGCYC 2 cut(s) 86, 345
EgeI GGCGCC 1 cut(s) 21
EheI GGCGCC 1 cut(s) 21
ErhI CCWWGG 4 cut(s) 481, 561, 1162, 1200
FaeI CATG 5 cut(s) 565, 733, 1136, 1166, 1175
FaiI YATR 8 cut(s) 478, 563, 600, 731, 974, 1134, 1164, 1173
FalI AAGNNNNNCTT 1 cut(s) 29
FatI CATG 5 cut(s) 561, 729, 1132, 1162, 1171
FauI CCCGC 2 cut(s) 340, 347
FblI GTMKAC 3 cut(s) 628, 959, 1007
Fnu4HI GCNGC 2 cut(s) 558, 1058
FriOI GRGCYC 2 cut(s) 86, 345
Fsp4HI GCNGC 2 cut(s) 558, 1058
FspBI CTAG 2 cut(s) 189, 996
GlaI GCGC 7 cut(s) 21, 49, 115, 518, 901, 1189, 1206
GluI GCNGC 2 cut(s) 558, 1058
GsuI CTGGAG 1 cut(s) 335
HaeII RGCGCY 3 cut(s) 23, 51, 1191
HaeIII GGCC 2 cut(s) 309, 560
HhaI GCGC 7 cut(s) 22, 50, 116, 519, 902, 1190, 1207
Hin1I GRCGYC 1 cut(s) 20
Hin1II CATG 5 cut(s) 565, 733, 1136, 1166, 1175
Hin6I GCGC 7 cut(s) 20, 48, 114, 517, 900, 1188, 1205
HinP1I GCGC 7 cut(s) 20, 48, 114, 517, 900, 1188, 1205
HincII GTYRAC 4 cut(s) 629, 673, 960, 1008
HindII GTYRAC 4 cut(s) 629, 673, 960, 1008
HindIII AAGCTT 1 cut(s) 321
HinfI GANTC 5 cut(s) 244, 539, 571, 625, 718
HphI GGTGA 3 cut(s) 741, 1090, 1102
Hpy166II GTNNAC 7 cut(s) 31, 629, 673, 859, 960, 1008, 1081
Hpy188I TCNGA 9 cut(s) 249, 372, 544, 576, 624, 686, 759, 907, 979
Hpy188III TCNNGA 7 cut(s) 281, 468, 651, 663, 722, 850, 895
Hpy8I GTNNAC 7 cut(s) 31, 629, 673, 859, 960, 1008, 1081
Hpy99I CGWCG 8 cut(s) 82, 278, 457, 633, 763, 766, 925, 1012
HpyAV CCTTC 5 cut(s) 216, 669, 810, 902, 922
HpyCH4III ACNGT 3 cut(s) 447, 1078, 1117
HpyCH4IV ACGT 5 cut(s) 393, 504, 631, 669, 741
HpyCH4V TGCA 3 cut(s) 746, 1069, 1171
HpyF10VI GCNNNNNNNGC 6 cut(s) 17, 111, 373, 752, 1029, 1066
HpyF3I CTNAG 2 cut(s) 179, 938
HpySE526I ACGT 5 cut(s) 393, 504, 631, 669, 741
Hsp92I GRCGYC 1 cut(s) 20
Hsp92II CATG 5 cut(s) 565, 733, 1136, 1166, 1175
HspAI GCGC 7 cut(s) 20, 48, 114, 517, 900, 1188, 1205
KasI GGCGCC 1 cut(s) 19
Kpn2I TCCGGA 2 cut(s) 721, 894
Kzo9I GATC 8 cut(s) 277, 360, 415, 422, 461, 544, 880, 931
LmnI GCTCC 3 cut(s) 59, 760, 897
LweI GCATC 2 cut(s) 755, 911
MabI ACCWGGT 1 cut(s) 695
MaeI CTAG 2 cut(s) 189, 996
MaeII ACGT 5 cut(s) 393, 504, 631, 669, 741
MaeIII GTNAC 2 cut(s) 584, 1090
MalI GATC 8 cut(s) 279, 362, 417, 424, 463, 546, 882, 933
MboI GATC 8 cut(s) 277, 360, 415, 422, 461, 544, 880, 931
MflI RGATCY 4 cut(s) 415, 422, 880, 931
MhlI GDGCHC 2 cut(s) 86, 345
MlsI TGGCCA 1 cut(s) 309
MluCI AATT 3 cut(s) 298, 991, 1176
MluNI TGGCCA 1 cut(s) 309
Mly113I GGCGCC 1 cut(s) 20
MlyI GAGTC 2 cut(s) 565, 634
MmeI TCCRAC 2 cut(s) 782, 957
Mox20I TGGCCA 1 cut(s) 309
MroI TCCGGA 2 cut(s) 721, 894
MroXI GAANNNNTTC 2 cut(s) 618, 658
MscI TGGCCA 1 cut(s) 309
MseI TTAA 1 cut(s) 1158
Msp20I TGGCCA 1 cut(s) 309
MspR9I CCNGG 7 cut(s) 91, 240, 241, 420, 697, 1085, 1183
Mva1269I GAATGC 1 cut(s) 660
MvaI CCWGG 2 cut(s) 697, 1183
MvnI CGCG 2 cut(s) 517, 1207
MwoI GCNNNNNNNGC 6 cut(s) 17, 111, 373, 752, 1029, 1066
NarI GGCGCC 1 cut(s) 20
NciI CCSGG 5 cut(s) 91, 240, 241, 420, 1085
NcoI CCATGG 2 cut(s) 561, 1162
NdeII GATC 8 cut(s) 277, 360, 415, 422, 461, 544, 880, 931
NlaIII CATG 5 cut(s) 565, 733, 1136, 1166, 1175
NlaIV GGNNCC 6 cut(s) 21, 417, 424, 694, 933, 1198
NmeAIII GCCGAG 2 cut(s) 364, 483
NmuCI GTSAC 1 cut(s) 1090
PaeR7I CTCGAG 1 cut(s) 1033
PaqCI CACCTGC 1 cut(s) 760
PcsI WCGNNNNNNNCGW 3 cut(s) 455, 956, 1031
PctI GAATGC 1 cut(s) 660
PdmI GAANNNNTTC 2 cut(s) 618, 658
PfeI GAWTC 3 cut(s) 244, 539, 718
PfoI TCCNGGA 1 cut(s) 418
PinAI ACCGGT 2 cut(s) 132, 1048
PkrI GCNGC 2 cut(s) 559, 1059
PleI GAGTC 2 cut(s) 565, 633
PluTI GGCGCC 1 cut(s) 23
PpsI GAGTC 2 cut(s) 565, 633
PpuMI RGGWCCY 1 cut(s) 1197
Psp124BI GAGCTC 1 cut(s) 345
Psp5II RGGWCCY 1 cut(s) 1197
Psp6I CCWGG 2 cut(s) 695, 1181
PspGI CCWGG 2 cut(s) 695, 1181
PspN4I GGNNCC 6 cut(s) 21, 417, 424, 694, 933, 1198
PspPI GGNCC 3 cut(s) 496, 1046, 1197
PspPPI RGGWCCY 1 cut(s) 1197
PspXI VCTCGAGB 1 cut(s) 1033
PstNI CAGNNNCTG 1 cut(s) 51
PsuI RGATCY 4 cut(s) 415, 422, 880, 931
RsaI GTAC 3 cut(s) 193, 474, 769
RsaNI GTAC 3 cut(s) 192, 473, 768
SacI GAGCTC 1 cut(s) 345
SalI GTCGAC 3 cut(s) 627, 958, 1006
SaqAI TTAA 1 cut(s) 1158
SatI GCNGC 2 cut(s) 558, 1058
Sau3AI GATC 8 cut(s) 277, 360, 415, 422, 461, 544, 880, 931
Sau96I GGNCC 3 cut(s) 496, 1046, 1197
ScaI AGTACT 2 cut(s) 193, 474
SchI GAGTC 2 cut(s) 565, 634
ScrFI CCNGG 7 cut(s) 91, 240, 241, 420, 697, 1085, 1183
SduI GDGCHC 2 cut(s) 86, 345
SexAI ACCWGGT 1 cut(s) 695
SfaNI GCATC 2 cut(s) 755, 911
SfoI GGCGCC 1 cut(s) 21
Sfr274I CTCGAG 1 cut(s) 1033
SinI GGWCC 3 cut(s) 496, 1046, 1197
SlaI CTCGAG 1 cut(s) 1033
SmaI CCCGGG 1 cut(s) 241
SmlI CTYRAG 1 cut(s) 1033
SmoI CTYRAG 1 cut(s) 1033
SpeI ACTAGT 1 cut(s) 188
Sse9I AATT 3 cut(s) 298, 991, 1176
SsiI CCGC 9 cut(s) 72, 151, 333, 354, 515, 557, 1039, 1058, 1088
SspDI GGCGCC 1 cut(s) 19
SspMI CTAG 2 cut(s) 189, 996
SstI GAGCTC 1 cut(s) 345
StyD4I CCNGG 7 cut(s) 89, 238, 239, 418, 695, 1083, 1181
StyI CCWWGG 4 cut(s) 481, 561, 1162, 1200
TaaI ACNGT 3 cut(s) 447, 1078, 1117
TaiI ACGT 5 cut(s) 396, 507, 634, 672, 744
TasI AATT 3 cut(s) 298, 991, 1176
TatI WGTACW 2 cut(s) 191, 472
TauI GCSGC 2 cut(s) 560, 1060
TfiI GAWTC 3 cut(s) 244, 539, 718
Tru1I TTAA 1 cut(s) 1158
Tru9I TTAA 1 cut(s) 1158
TscAI CASTG 1 cut(s) 310
TseFI GTSAC 1 cut(s) 1090
Tsp45I GTSAC 1 cut(s) 1090
TspDTI ATGAA 3 cut(s) 17, 609, 1188
TspGWI ACGGA 3 cut(s) 699, 1025, 1109
TspMI CCCGGG 1 cut(s) 239
TspRI CASTG 1 cut(s) 310
VpaK11BI GGWCC 3 cut(s) 496, 1046, 1197
XapI RAATTY 2 cut(s) 991, 1176
XhoI CTCGAG 1 cut(s) 1033
XmaI CCCGGG 1 cut(s) 239
XmiI GTMKAC 3 cut(s) 628, 959, 1007
XmnI GAANNNNTTC 2 cut(s) 618, 658
XspI CTAG 2 cut(s) 189, 996
ZrmI AGTACT 2 cut(s) 193, 474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.