Rmu_ssc0000124.1_g000014

3-phosphoinositide-dependent protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000124.1
OG0009841
Physical Location & Seq
Reverse (-)
54327 .. 61001
6675 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2376 bp
atgttggcaatggagaaagattttgatgccaagttgaagattcaggggaattcttcttctaatggtggtggtggtgctgatagtaatgttcagagagccaagaactttgctttcagggctccccaagagaatttcaccatccaagactttgaattgggcaagatctatggcgttggttcctattcaaaggttgtgagagcaaggaagaaggattcaggaattgtctacgcgttaaagatcatggacaaaaagttcatcaccaaagaaaataaaacagcttatgtgaagctggaacgtattgttcttgatcagctggatcatccaggtgttgtgcggctatttttcacttttcaggattccttttcactgtatatggcactggaatcctgtgaaggtggagagctctttgatcaaataacaaggaaaggtcgtctgtctgaggacgaagctcgcttctatgcagcagaagttgtagacgcacttgaatatatacacagtatgggattgatacatagagatataaagccagagaatttgttacttacagcagagggtaatatcaaggttgccgattttgggagtgtaaagcctatgcaggatagccaaattacagtccttccaaatgcagcttcagatgataaggcttgtacatttgttgggacagctgcatatgttcctccagaagtcctgaattcttcccctgcaacttttggaaatgacctctgggcacttggctgcaccttgtaccaaatgctttcaggaacttctcctttcaaagatgcaagcgagtggcttatttttcaaagaattatagcaagagatattaggtttccaaattatttctcagacgaagctaaagaccttattgatcgcttattggatttagatcccagtaggaggcctggtgctggacgcgatggttatgctgcactgaagatgcatccattctttaagggagtcgactggaaaaatttaagagcgcaaacccctccaaaacttgccttggagccagggtcaggtgaggctgaagatgtccgtgataactcatggaacccttcacatattggagatggcgcagcaagacaaaatgagggtaacactggttcagcatcctcttctgaagcatctggtcatgtaactaggctagcttcaattgactcctttgattcaaaatggcaacaattccttgaccctggtgagtctgttctcatgatctcaatggtgaagaaacttcaaaaactgacaagcaagaaggtgcagcttattctcaccaacaagccaaagttgatatatgtggatcctgcaaagctgttgatgaagggaaatataatttggtctgacaactctaatgatctcaatgtccaagttgctagtccttcacagttcaaaattgttacgcccaaaaaggtactgtcatttgaggatgcaaaacaaagagcatggcaatggaagaaggcaattgaggggcttcaaaataggagatctttgaagctcatccaagaaataaaccggaaggggccttacattggcctcatcacagtctatccaccagaagaggctgcttttttcgacaccggggcttttaagcctaatccaaagcatccttttctggatttctcaggtaggcgattccgggtgggaaagatccatgataagaaagtcgtctatgtgagatgtggagttggaatggtgaatgctgctgcagcaacacagcaaatgctggatctatttgacgttgtcggaattgttcattttggcatagctggcagtgccaataactctatgtctatcggtgatgttaccattcctcaacagtttgctcacactggcatatgggattgggtggtaaaaacccaaatggaactttggatctgcaatgaaccaaaaggaggagagaacctgttgggacacattggatttagaaatgaacggttctattctgagtccggtaatccaaatactgctcggctgttgttttgggcaaagagtactcgaaagtggcttcaggttgctgctcatttggagggagtcgaactggtgcaatgtgtgaattccagtatgtgtctgccacagaagcccaagctagttgttggtcttaggggatcaacaagcaacgcttttgtggacaatgcagcttacaggaacttcctttttcaaacttttcatgtttcctcagtggacatggaaagctcggctgtagtaatgacaagcttgtcaaatggcttcccggtgattgtgatcagagggttatcagacttagctggaaggcaagcaggagagaacccgattcagacctttgggcctctggcagctataaatgcttgcaaagtagttgtacagttcatcaaggacctgccagaggcagggtatgtataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008289 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019220 GO:0019222 GO:0019538 GO:0023052 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032268 GO:0032270 GO:0033674 GO:0035091 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0070300 GO:0071704 GO:0071944 GO:0080090 GO:0140096 GO:1901564
KEGG Pathways
Metabolic & Signaling
ko01524 ko03320 ko04011 ko04068 ko04071 ko04140 ko04150 ko04151 ko04152 ko04210 ko04510 ko04660 ko04664 ko04722 ko04910 ko04919 ko04931 ko04960 ko05145 ko05160 ko05205 ko05213 ko05215 ko05223 ko05231 map01524 map03320 map04011 map04068 map04071 map04140 map04150 map04151 map04152 map04210 map04510 map04660 map04664 map04722 map04910 map04919 map04931 map04960 map05145 map05160 map05205 map05213 map05215 map05223 map05231
Pfam Domains
Protein Families
PH_3 Pkinase

Protein Analysis

791

Amino Acids

87.65

Weight (kDa)

8.69

Isoelectric Point (pI)

31.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 51 - 316 1.9e-65 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 52 - 301 8.2e-29 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 148 - 266 1e-08 Kinase-like
PH_3 PF14593 390 - 493 3.7e-30 PH domain
PNP_UDP_1 PF01048 509 - 783 2.4e-32 Phosphorylase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009841)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G10540 AT5G04510 AT5G04510 AT5G04510
fragaria_vesca FvH4_7g18280 FvH4_7g18280 FvH4_7g18280
malus_domestica MD07G1165300.v1.1
prunus_persica Prupe.2G204000_v2.0.a1 Prupe.2G204000_v2.0.a1
pyrus_communis pycom07g16060
rosa_chinensis RchiOBHm_Chr1g0361861
rosa_laevigata RLG00000027696
rosa_multiflora Rmu_ssc0000124.1_g000014
rosa_roxburghii Rroxscaffold_4G00294640
rosa_rugosa Rorug01G0292000
rosa_samantha Rh1AG302600 Rh1BG265700 Rh1CG283800 Rh1DG295700
rosa_wichuraiana Rw1G026810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2212
Acc36I ACCTGC 1 cut(s) 2361
AccI GTMKAC 3 cut(s) 225, 474, 960
AccII CGCG 2 cut(s) 230, 915
AciI CCGC 1 cut(s) 334
AclWI GGATC 8 cut(s) 324, 881, 1292, 1305, 1639, 1731, 1877, 2110
AcsI RAATTY 6 cut(s) 49, 130, 532, 691, 970, 2050
AcuI CTGAAG 5 cut(s) 615, 953, 1047, 1140, 1988
AfaI GTAC 5 cut(s) 649, 746, 1410, 1990, 2337
AfiI CCNNNNNNNGG 8 cut(s) 576, 897, 908, 1016, 1526, 1889, 2359, 2363
AflIII ACRYGT 1 cut(s) 228
AjnI CCWGG 4 cut(s) 322, 901, 1009, 1192
AjuI GAANNNNNNNTTGG 4 cut(s) 613, 645, 1315, 1347
AloI GAACNNNNNNTCC 2 cut(s) 236, 268
Alw21I GWGCWC 1 cut(s) 405
AlwI GGATC 8 cut(s) 324, 881, 1292, 1305, 1639, 1731, 1877, 2110
AoxI GGCC 4 cut(s) 899, 1517, 1528, 2300
ApoI RAATTY 6 cut(s) 49, 130, 532, 691, 970, 2050
AspLEI GCGC 2 cut(s) 982, 1076
AspS9I GGNCC 3 cut(s) 1517, 2300, 2350
AsuC2I CCSGG 3 cut(s) 1576, 1634, 2228
AsuHPI GGTGA 9 cut(s) 127, 250, 1031, 1208, 1234, 1261, 1702, 1805, 2242
AsuNHI GCTAGC 1 cut(s) 1144
AvaII GGWCC 1 cut(s) 2350
BaeGI GKGCMC 1 cut(s) 730
BamHI GGATCC 1 cut(s) 1297
BanII GRGCYC 2 cut(s) 121, 405
BarI GAAGNNNNNNTAC 2 cut(s) 1505, 1537
Bbv12I GWGCWC 1 cut(s) 405
BccI CCATC 3 cut(s) 146, 911, 1064
BcgI CGANNNNNNTGC 2 cut(s) 905, 939
BciT130I CCWGG 4 cut(s) 324, 903, 1011, 1194
BclI TGATCA 3 cut(s) 307, 409, 2238
BcnI CCSGG 3 cut(s) 1576, 1634, 2228
BfaI CTAG 4 cut(s) 1140, 1145, 1371, 2084
BfmI CTRYAG 2 cut(s) 1701, 2196
BfuAI ACCTGC 1 cut(s) 2361
BglII AGATCT 2 cut(s) 162, 1481
BmcAI AGTACT 1 cut(s) 1990
Bme1390I CCNGG 7 cut(s) 324, 903, 1011, 1194, 1576, 1634, 2228
Bme18I GGWCC 1 cut(s) 2350
BmgT120I GGNCC 3 cut(s) 1517, 2300, 2350
BmiI GGNNCC 6 cut(s) 120, 178, 1008, 1052, 1299, 1518
BmrFI CCNGG 7 cut(s) 324, 903, 1011, 1194, 1576, 1634, 2228
BmrI ACTGGG 1 cut(s) 885
BmsI GCATC 8 cut(s) 16, 769, 927, 949, 1118, 1133, 1414, 1609
BmtI GCTAGC 1 cut(s) 1148
BmuI ACTGGG 1 cut(s) 885
BpmI CTGGAG 1 cut(s) 663
BpuMI CCSGG 3 cut(s) 1576, 1634, 2228
BsaBI GATNNNNATC 2 cut(s) 885, 2237
BsaJI CCNNGG 4 cut(s) 1002, 1010, 1192, 1575
BsaWI WCCGGW 2 cut(s) 1509, 1946
BsaXI ACNNNNNCTCC 4 cut(s) 889, 919, 998, 1028
Bsc4I CCNNNNNNNGG 8 cut(s) 576, 897, 908, 1016, 1526, 1889, 2359, 2363
Bse1I ACTGG 7 cut(s) 384, 891, 968, 1105, 1831, 2040, 2055
Bse3DI GCAATG 4 cut(s) 15, 1451, 1882, 2048
Bse8I GATNNNNATC 2 cut(s) 885, 2237
BseBI CCWGG 4 cut(s) 324, 903, 1011, 1194
BseDI CCNNGG 4 cut(s) 1002, 1010, 1192, 1575
BseGI GGATG 7 cut(s) 138, 319, 940, 1109, 1429, 1494, 1600
BseJI GATNNNNATC 2 cut(s) 885, 2237
BseLI CCNNNNNNNGG 8 cut(s) 576, 897, 908, 1016, 1526, 1889, 2359, 2363
BseMI GCAATG 4 cut(s) 15, 1451, 1882, 2048
BseMII CTCAG 5 cut(s) 429, 858, 1632, 1932, 2187
BseNI ACTGG 7 cut(s) 384, 891, 968, 1105, 1831, 2040, 2055
BseRI GAGGAG 1 cut(s) 1905
BseSI GKGCMC 1 cut(s) 730
BsgI GTGCAG 3 cut(s) 721, 912, 1277
Bsh1236I CGCG 2 cut(s) 230, 915
BshFI GGCC 4 cut(s) 901, 1519, 1530, 2302
BsiHKAI GWGCWC 1 cut(s) 405
BsiSI CCGG 5 cut(s) 1510, 1575, 1633, 1947, 2228
BslFI GGGAC 2 cut(s) 673, 1920
BslI CCNNNNNNNGG 8 cut(s) 576, 897, 908, 1016, 1526, 1889, 2359, 2363
BsmFI GGGAC 2 cut(s) 673, 1920
BsmI GAATGC 1 cut(s) 1699
BsnI GGCC 4 cut(s) 901, 1519, 1530, 2302
Bsp1286I GDGCHC 3 cut(s) 121, 405, 730
Bsp1407I TGTACA 2 cut(s) 647, 2335
BspACI CCGC 1 cut(s) 334
BspANI GGCC 4 cut(s) 901, 1519, 1530, 2302
BspCNI CTCAG 5 cut(s) 430, 857, 1631, 1933, 2186
BspFNI CGCG 2 cut(s) 230, 915
BspHI TCATGA 1 cut(s) 1209
BspLI GGNNCC 6 cut(s) 120, 178, 1008, 1052, 1299, 1518
BspMAI CTGCAG 1 cut(s) 1705
BspMI ACCTGC 1 cut(s) 2361
BspOI GCTAGC 1 cut(s) 1148
BspPI GGATC 8 cut(s) 324, 881, 1292, 1305, 1639, 1731, 1877, 2110
BsrDI GCAATG 4 cut(s) 15, 1451, 1882, 2048
BsrGI TGTACA 2 cut(s) 647, 2335
BsrI ACTGG 7 cut(s) 384, 891, 968, 1105, 1831, 2040, 2055
BssECI CCNNGG 4 cut(s) 1002, 1010, 1192, 1575
BssT1I CCWWGG 1 cut(s) 1002
Bst2UI CCWGG 4 cut(s) 324, 903, 1011, 1194
Bst4CI ACNGT 9 cut(s) 369, 497, 613, 1383, 1413, 1540, 1815, 1932, 2340
Bst6I CTCTTC 2 cut(s) 1120, 1548
BstAUI TGTACA 2 cut(s) 647, 2335
BstC8I GCNNGC 6 cut(s) 451, 784, 1146, 1765, 2271, 2323
BstDEI CTNAG 7 cut(s) 438, 844, 1618, 1941, 2096, 2173, 2257
BstENI CCTNNNNNAGG 1 cut(s) 2357
BstF5I GGATG 7 cut(s) 138, 319, 940, 1109, 1429, 1494, 1600
BstFNI CGCG 2 cut(s) 230, 915
BstHHI GCGC 2 cut(s) 982, 1076
BstMWI GCNNNNNNNGC 6 cut(s) 116, 1703, 1764, 1769, 2074, 2318
BstNI CCWGG 4 cut(s) 324, 903, 1011, 1194
BstSCI CCNGG 7 cut(s) 322, 901, 1009, 1192, 1574, 1632, 2226
BstSFI CTRYAG 2 cut(s) 1701, 2196
BstSLI GKGCMC 1 cut(s) 730
BstUI CGCG 2 cut(s) 230, 915
BstX2I RGATCY 7 cut(s) 162, 886, 1297, 1481, 1644, 1723, 1869
BstYI RGATCY 7 cut(s) 162, 886, 1297, 1481, 1644, 1723, 1869
BsuRI GGCC 4 cut(s) 901, 1519, 1530, 2302
BtgZI GCGATG 1 cut(s) 930
BtsCI GGATG 7 cut(s) 138, 319, 940, 1109, 1429, 1494, 1600
BtsI GCAGTG 1 cut(s) 1774
BtsIMutI CAGTG 7 cut(s) 365, 377, 929, 1098, 1774, 1824, 2181
BveI ACCTGC 1 cut(s) 2361
Cac8I GCNNGC 6 cut(s) 451, 784, 1146, 1765, 2271, 2323
CciI TCATGA 1 cut(s) 1209
CfoI GCGC 2 cut(s) 982, 1076
Cfr13I GGNCC 3 cut(s) 1517, 2300, 2350
CseI GACGC 2 cut(s) 485, 921
Csp6I GTAC 5 cut(s) 648, 745, 1409, 1989, 2336
CviAII CATG 8 cut(s) 241, 1047, 1133, 1210, 1440, 1649, 2165, 2182
CviQI GTAC 5 cut(s) 648, 745, 1409, 1989, 2336
DdeI CTNAG 7 cut(s) 438, 844, 1618, 1941, 2096, 2173, 2257
DrdI GACNNNNNNGTC 1 cut(s) 2212
DseDI GACNNNNNNGTC 1 cut(s) 2212
Eam1104I CTCTTC 2 cut(s) 1120, 1548
EarI CTCTTC 2 cut(s) 1120, 1548
Ecl136II GAGCTC 1 cut(s) 403
Eco130I CCWWGG 1 cut(s) 1002
Eco147I AGGCCT 1 cut(s) 901
Eco24I GRGCYC 2 cut(s) 121, 405
Eco47I GGWCC 1 cut(s) 2350
Eco53kI GAGCTC 1 cut(s) 403
Eco57I CTGAAG 5 cut(s) 615, 953, 1047, 1140, 1988
EcoICRI GAGCTC 1 cut(s) 403
EcoNI CCTNNNNNAGG 1 cut(s) 2357
EcoO109I RGGNCCY 2 cut(s) 1517, 2350
EcoRI GAATTC 3 cut(s) 49, 691, 2050
EcoRII CCWGG 4 cut(s) 322, 901, 1009, 1192
EcoT14I CCWWGG 1 cut(s) 1002
EcoT22I ATGCAT 1 cut(s) 942
EcoT38I GRGCYC 2 cut(s) 121, 405
ErhI CCWWGG 1 cut(s) 1002
FaeI CATG 8 cut(s) 244, 1050, 1136, 1213, 1443, 1652, 2168, 2185
FalI AAGNNNNNCTT 2 cut(s) 2101, 2133
FaqI GGGAC 2 cut(s) 673, 1920
FatI CATG 8 cut(s) 240, 1046, 1132, 1209, 1439, 1648, 2164, 2181
FauNDI CATATG 2 cut(s) 670, 1832
FbaI TGATCA 3 cut(s) 307, 409, 2238
FblI GTMKAC 3 cut(s) 225, 474, 960
FokI GGATG 7 cut(s) 125, 306, 927, 1096, 1436, 1481, 1587
FriOI GRGCYC 2 cut(s) 121, 405
FspBI CTAG 4 cut(s) 1140, 1145, 1371, 2084
GlaI GCGC 2 cut(s) 981, 1075
GsuI CTGGAG 1 cut(s) 663
HaeIII GGCC 4 cut(s) 901, 1519, 1530, 2302
HapII CCGG 5 cut(s) 1510, 1575, 1633, 1947, 2228
HgaI GACGC 2 cut(s) 485, 921
HhaI GCGC 2 cut(s) 982, 1076
Hin1II CATG 8 cut(s) 244, 1050, 1136, 1213, 1443, 1652, 2168, 2185
Hin6I GCGC 2 cut(s) 980, 1074
HinP1I GCGC 2 cut(s) 980, 1074
HincII GTYRAC 1 cut(s) 961
HindII GTYRAC 1 cut(s) 961
HindIII AAGCTT 1 cut(s) 2209
HpaII CCGG 5 cut(s) 1510, 1575, 1633, 1947, 2228
HphI GGTGA 9 cut(s) 127, 250, 1031, 1208, 1234, 1261, 1702, 1805, 2242
Hpy166II GTNNAC 5 cut(s) 226, 475, 961, 2125, 2179
Hpy188III TCNNGA 8 cut(s) 216, 305, 353, 680, 688, 759, 1210, 1610
Hpy8I GTNNAC 5 cut(s) 226, 475, 961, 2125, 2179
HpyCH4III ACNGT 9 cut(s) 369, 497, 613, 1383, 1413, 1540, 1815, 1932, 2340
HpyCH4IV ACGT 2 cut(s) 295, 1734
HpyF10VI GCNNNNNNNGC 6 cut(s) 116, 1703, 1764, 1769, 2074, 2318
HpyF3I CTNAG 7 cut(s) 438, 844, 1618, 1941, 2096, 2173, 2257
HpySE526I ACGT 2 cut(s) 295, 1734
Hsp92II CATG 8 cut(s) 244, 1050, 1136, 1213, 1443, 1652, 2168, 2185
HspAI GCGC 2 cut(s) 980, 1074
Ksp22I TGATCA 3 cut(s) 307, 409, 2238
LmnI GCTCC 2 cut(s) 124, 1006
LweI GCATC 8 cut(s) 16, 769, 927, 949, 1118, 1133, 1414, 1609
MaeI CTAG 4 cut(s) 1140, 1145, 1371, 2084
MaeII ACGT 2 cut(s) 295, 1734
MaeIII GTNAC 5 cut(s) 537, 1094, 1135, 1393, 1798
MfeI CAATTG 2 cut(s) 1152, 1458
MflI RGATCY 7 cut(s) 162, 886, 1297, 1481, 1644, 1723, 1869
MhlI GDGCHC 3 cut(s) 121, 405, 730
MluI ACGCGT 1 cut(s) 228
MlyI GAGTC 5 cut(s) 966, 1151, 1208, 1952, 2037
MmeI TCCRAC 2 cut(s) 1663, 1720
Mph1103I ATGCAT 1 cut(s) 942
MseI TTAA 4 cut(s) 233, 951, 974, 1584
MslI CAYNNNNRTG 2 cut(s) 324, 1444
MspA1I CMGCKG 2 cut(s) 313, 665
MspI CCGG 5 cut(s) 1510, 1575, 1633, 1947, 2228
MspR9I CCNGG 7 cut(s) 324, 903, 1011, 1194, 1576, 1634, 2228
MunI CAATTG 2 cut(s) 1152, 1458
Mva1269I GAATGC 1 cut(s) 1699
MvaI CCWGG 4 cut(s) 324, 903, 1011, 1194
MvnI CGCG 2 cut(s) 230, 915
MwoI GCNNNNNNNGC 6 cut(s) 116, 1703, 1764, 1769, 2074, 2318
NciI CCSGG 3 cut(s) 1576, 1634, 2228
NdeI CATATG 2 cut(s) 670, 1832
NheI GCTAGC 1 cut(s) 1144
NlaIII CATG 8 cut(s) 244, 1050, 1136, 1213, 1443, 1652, 2168, 2185
NlaIV GGNNCC 6 cut(s) 120, 178, 1008, 1052, 1299, 1518
NmeAIII GCCGAG 2 cut(s) 1945, 2171
NsiI ATGCAT 1 cut(s) 942
PagI TCATGA 1 cut(s) 1209
PceI AGGCCT 1 cut(s) 901
PctI GAATGC 1 cut(s) 1699
PfeI GAWTC 7 cut(s) 40, 212, 356, 383, 1166, 1629, 2287
PflFI GACNNNGTC 1 cut(s) 1736
PleI GAGTC 5 cut(s) 965, 1151, 1207, 1951, 2036
PpsI GAGTC 5 cut(s) 965, 1151, 1207, 1951, 2036
PpuMI RGGWCCY 1 cut(s) 2350
Psp124BI GAGCTC 1 cut(s) 405
Psp5II RGGWCCY 1 cut(s) 2350
Psp6I CCWGG 4 cut(s) 322, 901, 1009, 1192
PspGI CCWGG 4 cut(s) 322, 901, 1009, 1192
PspN4I GGNNCC 6 cut(s) 120, 178, 1008, 1052, 1299, 1518
PspPI GGNCC 3 cut(s) 1517, 2300, 2350
PspPPI RGGWCCY 1 cut(s) 2350
PsrI GAACNNNNNNTAC 2 cut(s) 1087, 1119
PstI CTGCAG 1 cut(s) 1705
PsuI RGATCY 7 cut(s) 162, 886, 1297, 1481, 1644, 1723, 1869
PsyI GACNNNGTC 1 cut(s) 1736
PvuII CAGCTG 2 cut(s) 313, 665
RsaI GTAC 5 cut(s) 649, 746, 1410, 1990, 2337
RsaNI GTAC 5 cut(s) 648, 745, 1409, 1989, 2336
RseI CAYNNNNRTG 2 cut(s) 324, 1444
SacI GAGCTC 1 cut(s) 405
SalI GTCGAC 1 cut(s) 959
SaqAI TTAA 4 cut(s) 233, 951, 974, 1584
Sau96I GGNCC 3 cut(s) 1517, 2300, 2350
ScaI AGTACT 1 cut(s) 1990
SchI GAGTC 5 cut(s) 966, 1151, 1208, 1952, 2037
ScrFI CCNGG 7 cut(s) 324, 903, 1011, 1194, 1576, 1634, 2228
SduI GDGCHC 3 cut(s) 121, 405, 730
SfaNI GCATC 8 cut(s) 16, 769, 927, 949, 1118, 1133, 1414, 1609
SfcI CTRYAG 2 cut(s) 1701, 2196
SinI GGWCC 1 cut(s) 2350
SmiMI CAYNNNNRTG 2 cut(s) 324, 1444
SseBI AGGCCT 1 cut(s) 901
SsiI CCGC 1 cut(s) 334
SspMI CTAG 4 cut(s) 1140, 1145, 1371, 2084
SstI GAGCTC 1 cut(s) 405
StuI AGGCCT 1 cut(s) 901
StyD4I CCNGG 7 cut(s) 322, 901, 1009, 1192, 1574, 1632, 2226
StyI CCWWGG 1 cut(s) 1002
TaaI ACNGT 9 cut(s) 369, 497, 613, 1383, 1413, 1540, 1815, 1932, 2340
TaiI ACGT 2 cut(s) 298, 1737
TaqI TCGA 4 cut(s) 960, 1569, 1993, 2031
TatI WGTACW 3 cut(s) 647, 1988, 2335
TauI GCSGC 1 cut(s) 337
TfiI GAWTC 7 cut(s) 40, 212, 356, 383, 1166, 1629, 2287
Tru1I TTAA 4 cut(s) 233, 951, 974, 1584
Tru9I TTAA 4 cut(s) 233, 951, 974, 1584
TscAI CASTG 7 cut(s) 372, 384, 936, 1105, 1774, 1831, 2181
TspDTI ATGAA 7 cut(s) 244, 1331, 1739, 1893, 1941, 2153, 2332
TspGWI ACGGA 1 cut(s) 1025
TspRI CASTG 7 cut(s) 372, 384, 936, 1105, 1774, 1831, 2181
Tth111I GACNNNGTC 1 cut(s) 1736
VpaK11BI GGWCC 1 cut(s) 2350
XagI CCTNNNNNAGG 1 cut(s) 2357
XapI RAATTY 6 cut(s) 49, 130, 532, 691, 970, 2050
XmiI GTMKAC 3 cut(s) 225, 474, 960
XspI CTAG 4 cut(s) 1140, 1145, 1371, 2084
ZrmI AGTACT 1 cut(s) 1990
Zsp2I ATGCAT 1 cut(s) 942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.