Plant invertase/pectin methylesterase inhibitor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g00110 |
| prunus_persica | Prupe.4G001200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0000141 |
| rosa_multiflora | Rmu_ssc0000243.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00075950 |
| rosa_rugosa | Rorug04G0381900 |
| rosa_samantha | Rh5BG002300 Rh5CG001100 Rh5DG001000 |
| rosa_wichuraiana | Rw5G000130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 416 |
| Acc36I | ACCTGC | 1 cut(s) | 416 |
| AccI | GTMKAC | 1 cut(s) | 126 |
| AciI | CCGC | 1 cut(s) | 283 |
| AcsI | RAATTY | 1 cut(s) | 105 |
| AfaI | GTAC | 1 cut(s) | 248 |
| AgsI | TTSAA | 2 cut(s) | 50, 469 |
| AluBI | AGCT | 6 cut(s) | 121, 156, 213, 325, 412, 461 |
| AluI | AGCT | 6 cut(s) | 121, 156, 213, 325, 412, 461 |
| Alw26I | GTCTC | 4 cut(s) | 32, 180, 521, 544 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 325 |
| AoxI | GGCC | 1 cut(s) | 354 |
| ApeKI | GCWGC | 8 cut(s) | 77, 302, 319, 322, 325, 367, 443, 461 |
| ApoI | RAATTY | 1 cut(s) | 105 |
| AspLEI | GCGC | 1 cut(s) | 367 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 481 |
| BbvI | GCAGC | 8 cut(s) | 64, 312, 314, 331, 334, 354, 430, 448 |
| BcoDI | GTCTC | 4 cut(s) | 32, 180, 521, 544 |
| BfmI | CTRYAG | 1 cut(s) | 181 |
| BfuAI | ACCTGC | 1 cut(s) | 416 |
| BisI | GCNGC | 8 cut(s) | 78, 303, 320, 323, 326, 368, 444, 462 |
| BlsI | GCNGC | 8 cut(s) | 79, 304, 321, 324, 327, 369, 445, 463 |
| BpuEI | CTTGAG | 1 cut(s) | 494 |
| BsaI | GGTCTC | 1 cut(s) | 521 |
| BsaJI | CCNNGG | 1 cut(s) | 191 |
| Bse1I | ACTGG | 1 cut(s) | 559 |
| BseDI | CCNNGG | 1 cut(s) | 191 |
| BseNI | ACTGG | 1 cut(s) | 559 |
| BseXI | GCAGC | 8 cut(s) | 64, 312, 314, 331, 334, 354, 430, 448 |
| BshFI | GGCC | 1 cut(s) | 356 |
| BsmAI | GTCTC | 4 cut(s) | 32, 180, 521, 544 |
| BsnI | GGCC | 1 cut(s) | 356 |
| Bso31I | GGTCTC | 1 cut(s) | 521 |
| Bsp143I | GATC | 1 cut(s) | 505 |
| BspACI | CCGC | 1 cut(s) | 283 |
| BspANI | GGCC | 1 cut(s) | 356 |
| BspMI | ACCTGC | 1 cut(s) | 416 |
| BspTNI | GGTCTC | 1 cut(s) | 521 |
| BsrI | ACTGG | 1 cut(s) | 559 |
| BssECI | CCNNGG | 1 cut(s) | 191 |
| BssMI | GATC | 1 cut(s) | 505 |
| BssT1I | CCWWGG | 1 cut(s) | 191 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 325, 431 |
| BstC8I | GCNNGC | 4 cut(s) | 222, 283, 317, 414 |
| BstHHI | GCGC | 1 cut(s) | 367 |
| BstKTI | GATC | 1 cut(s) | 508 |
| BstMAI | GTCTC | 4 cut(s) | 32, 180, 521, 544 |
| BstMBI | GATC | 1 cut(s) | 505 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 118, 316, 325, 362, 422, 431, 440 |
| BstNSI | RCATGY | 1 cut(s) | 278 |
| BstSFI | CTRYAG | 1 cut(s) | 181 |
| BstV1I | GCAGC | 8 cut(s) | 64, 312, 314, 331, 334, 354, 430, 448 |
| BsuRI | GGCC | 1 cut(s) | 356 |
| BveI | ACCTGC | 1 cut(s) | 416 |
| Cac8I | GCNNGC | 4 cut(s) | 222, 283, 317, 414 |
| CaiI | CAGNNNCTG | 1 cut(s) | 325 |
| CfoI | GCGC | 1 cut(s) | 367 |
| CseI | GACGC | 1 cut(s) | 137 |
| Csp6I | GTAC | 1 cut(s) | 247 |
| CviAII | CATG | 4 cut(s) | 72, 275, 341, 496 |
| CviQI | GTAC | 1 cut(s) | 247 |
| DpnI | GATC | 1 cut(s) | 507 |
| DpnII | GATC | 1 cut(s) | 505 |
| Eco130I | CCWWGG | 1 cut(s) | 191 |
| Eco31I | GGTCTC | 1 cut(s) | 521 |
| EcoRI | GAATTC | 1 cut(s) | 105 |
| EcoT14I | CCWWGG | 1 cut(s) | 191 |
| ErhI | CCWWGG | 1 cut(s) | 191 |
| FaeI | CATG | 4 cut(s) | 75, 278, 344, 499 |
| FaiI | YATR | 9 cut(s) | 18, 68, 73, 183, 216, 276, 312, 342, 497 |
| FatI | CATG | 4 cut(s) | 71, 274, 340, 495 |
| FauI | CCCGC | 1 cut(s) | 290 |
| FblI | GTMKAC | 1 cut(s) | 126 |
| Fnu4HI | GCNGC | 8 cut(s) | 78, 303, 320, 323, 326, 368, 444, 462 |
| Fsp4HI | GCNGC | 8 cut(s) | 78, 303, 320, 323, 326, 368, 444, 462 |
| GlaI | GCGC | 1 cut(s) | 366 |
| GluI | GCNGC | 8 cut(s) | 78, 303, 320, 323, 326, 368, 444, 462 |
| HaeIII | GGCC | 1 cut(s) | 356 |
| HgaI | GACGC | 1 cut(s) | 137 |
| HhaI | GCGC | 1 cut(s) | 367 |
| Hin1II | CATG | 4 cut(s) | 75, 278, 344, 499 |
| Hin6I | GCGC | 1 cut(s) | 365 |
| HinP1I | GCGC | 1 cut(s) | 365 |
| HindIII | AAGCTT | 1 cut(s) | 119 |
| HinfI | GANTC | 2 cut(s) | 173, 196 |
| HphI | GGTGA | 2 cut(s) | 16, 481 |
| Hpy166II | GTNNAC | 1 cut(s) | 127 |
| Hpy188I | TCNGA | 3 cut(s) | 141, 397, 566 |
| Hpy8I | GTNNAC | 1 cut(s) | 127 |
| HpyCH4V | TGCA | 2 cut(s) | 328, 370 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 118, 316, 325, 362, 422, 431, 440 |
| Hsp92II | CATG | 4 cut(s) | 75, 278, 344, 499 |
| HspAI | GCGC | 1 cut(s) | 365 |
| Kzo9I | GATC | 1 cut(s) | 505 |
| LpnPI | CCDG | 7 cut(s) | 35, 87, 291, 299, 329, 411, 540 |
| Lsp1109I | GCAGC | 8 cut(s) | 64, 312, 314, 331, 334, 354, 430, 448 |
| MaeIII | GTNAC | 1 cut(s) | 335 |
| MalI | GATC | 1 cut(s) | 507 |
| MboI | GATC | 1 cut(s) | 505 |
| MboII | GAAGA | 3 cut(s) | 49, 52, 55 |
| MluCI | AATT | 2 cut(s) | 105, 391 |
| MlyI | GAGTC | 2 cut(s) | 182, 190 |
| MmeI | TCCRAC | 2 cut(s) | 119, 224 |
| MnlI | CCTC | 4 cut(s) | 260, 268, 398, 495 |
| MseI | TTAA | 1 cut(s) | 290 |
| MslI | CAYNNNNRTG | 1 cut(s) | 494 |
| MspA1I | CMGCKG | 1 cut(s) | 325 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 118, 316, 325, 362, 422, 431, 440 |
| NdeII | GATC | 1 cut(s) | 505 |
| NlaIII | CATG | 4 cut(s) | 75, 278, 344, 499 |
| NspI | RCATGY | 1 cut(s) | 278 |
| PaqCI | CACCTGC | 1 cut(s) | 416 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 381 |
| PkrI | GCNGC | 8 cut(s) | 79, 304, 321, 324, 327, 369, 445, 463 |
| PleI | GAGTC | 2 cut(s) | 181, 190 |
| PpsI | GAGTC | 2 cut(s) | 181, 190 |
| PstNI | CAGNNNCTG | 1 cut(s) | 325 |
| PvuII | CAGCTG | 1 cut(s) | 325 |
| RsaI | GTAC | 1 cut(s) | 248 |
| RsaNI | GTAC | 1 cut(s) | 247 |
| RseI | CAYNNNNRTG | 1 cut(s) | 494 |
| SaqAI | TTAA | 1 cut(s) | 290 |
| SatI | GCNGC | 8 cut(s) | 78, 303, 320, 323, 326, 368, 444, 462 |
| Sau3AI | GATC | 1 cut(s) | 505 |
| SchI | GAGTC | 2 cut(s) | 182, 190 |
| SetI | ASST | 9 cut(s) | 123, 158, 215, 252, 327, 390, 414, 430, 463 |
| SfcI | CTRYAG | 1 cut(s) | 181 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 494 |
| SmlI | CTYRAG | 1 cut(s) | 509 |
| SmoI | CTYRAG | 1 cut(s) | 509 |
| Sse9I | AATT | 2 cut(s) | 105, 391 |
| SsiI | CCGC | 1 cut(s) | 283 |
| SspI | AATATT | 1 cut(s) | 11 |
| StyI | CCWWGG | 1 cut(s) | 191 |
| TaqI | TCGA | 1 cut(s) | 152 |
| TasI | AATT | 2 cut(s) | 105, 391 |
| Tru1I | TTAA | 1 cut(s) | 290 |
| Tru9I | TTAA | 1 cut(s) | 290 |
| TseI | GCWGC | 8 cut(s) | 77, 302, 319, 322, 325, 367, 443, 461 |
| TspDTI | ATGAA | 2 cut(s) | 55, 512 |
| XapI | RAATTY | 1 cut(s) | 105 |
| XceI | RCATGY | 1 cut(s) | 278 |
| XmiI | GTMKAC | 1 cut(s) | 126 |