Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000289.1

Orthogroup ID

OG0008744

Physical Location & Seq

Genomic Coordinates Reverse (-)

134515 .. 137814

Gene Structure 3300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000289.1_g000026.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2382 bp

atgagtcgttccccatcattttcagtgaagtcggaatttagtccaaagcttgatccagaatctttgcagcaatgggttgtggctttttgtatcatcagatttgatcttgaacagggtcagcttattgaagagtgttacccacctggttgtcttacgcaagatgaggagcttgaaatcgcttttagttcattcccagattccgtttcccagcatcagaatcgctcaagcattcatgactgtatattctttttccggtttcgaaggcgggaacgtcttcaaatggacaatgtggcttccacagagatcactgagagtaataagaagttacctacaaattccccagatgtaaaaccccctagaagttcaaaaagtaacaacatttctgatacttcgagatacatgtatggttatgtctttaatcgacagagacatgatgagaggctaaaacgaggtggggagcagaagtctgtgggtcagcttattgaagagtgttacccacctggttgtcttacgcaagatgaggagcttgaaatcgctttcagttcattcccagattccgtttcccagcatcagaatcgctcaagcattcatgactgtatattctttttccggtttcgaaggcggggacgtcttcaaatggacagtgtggcttccacagagatcactgagagtaataagaagttacctacaaattccccagatgtaaaaccccctagaagttcaaaaagtaacaacatttctgatacttcgagatacatgtatggttatgtctttaatcgacagagacatgatgagaggctaaaacgaggtggggagcagaagtctgtggtaattttgtcacacagtcctttctctagtgtgtttagacctttgttacaaatcatgggtcctctatattttgacattggaaggaaggctcttgagcatattgctgcttatgtttcaatgtggccatgccctgtacctggtaagctaatggagcttcctattgggaatgctgctctgaaagtgaacttgccacctgcccacagcttgccctcagaaagtgggatgttgtttgaagaatctgcatcctctatggctccttttcttcctaataatcagtcagtcccacagggtctttttcatgactcagatctattcggcatctttaggggtctattgttgcagctttgggttctgtgggagttgttacttattggtgagcccattcttatcatagctcctacacctccacaatgttctgaagctgttgctggtcttgtgagtttggtagcacctctactttgtagtgttgattttagaccttatttcaccatccatgacccagaatttgcccagctcaactcgcttcatgaaggagacacttttcctcctatgattttgggtgttactaacctctttttccttaaatctctccgtaatatgccccacattgtttctgtcggaagccctgctcctaataccaaccggcttcctttttctagtaggtcctctactggaagactttccggtagaccagaagggtttggtcttcaacagctttcccttaaaagattttctccttcaaacttgttgaatgctgtcaagttaaggagagatggtcctctttgtctcatgacagagcataaggaagccatttggagcacttatgctgcaacaactaagcctgacacttctatcctcaataggcttatagatgctgggatgtcaccacgggttgaggagtcaatgtcagttgttaacaatgagatactacggcgtcatttcttggagctcaccaccaactttttggcgccttttggtccatattttaagactagaacaccttcagaaggatcttctccgtttgtcgatcctcctcctctcgttccgtataatgacaatgaatttctggcaagtttatcagcaagaggacctgggaagtttttatcaaaaaggatgagatcgaactggctggacttgtacaggcggtttctgcaagggcccaactttacaccatggtttcaaagaaggcgtactgttgctgaacaagagcaagatagactctggaagcaggcgagaattaacaccgacatacatcagttaatatcgaagatgtcggaattggaagttgttgattccttcaatgctattgagagacatattcttggagaaacacagcaatctggaagtgatggcacacatagcacagactctgctgcgacttgccaaaagctaaagagagatctgcaggcagtattcaatgtgcttcccaaggacgtgcaacaacttctacttcttaccccagaaagggcagctcttctgaaaggaagctctgaaaataaaaaacttccggggaccccgcctatacaaattgcatcgccaacgtcaccaaggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SPA

Protein Analysis

793

Amino Acids

89.6

Weight (kDa)

8.58

Isoelectric Point (pI)

71.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008744)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73930 AT1G73930
fragaria_vesca	FvH4_5g12680
malus_domestica	MD06G1211600.v1.1 MD14G1222100.v1.1
prunus_persica	Prupe.5G217600_v2.0.a1 Prupe.5G217600_v2.0.a1
pyrus_communis	pycom06g18900 pycom14g18370
rosa_chinensis	RchiOBHm_Chr7g0184651
rosa_laevigata	RLG00000004962
rosa_multiflora	Rmu_ssc0000289.1_g000026
rosa_roxburghii	Rroxscaffold_3G00269450
rosa_rugosa	Rorug06G0464100 Rorug06G0464200 Rorug06G0464200 Rorug06G0464200 Rorug06G0464200
rosa_samantha	Rh7AG078700 Rh7BG068600 Rh7CG069400 Rh7DG068700
rosa_wichuraiana	Rw7G005660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1030
AatII	GACGTC	1 cut(s)	631
Acc36I	ACCTGC	1 cut(s)	1030
AccB1I	GGYRCC	1 cut(s)	1795
AccI	GTMKAC	1 cut(s)	1516
AciI	CCGC	4 cut(s)	265, 622, 1972, 2345
AclWI	GGATC	3 cut(s)	47, 1846, 1850
AcoI	YGGCCR	1 cut(s)	950
AcsI	RAATTY	5 cut(s)	35, 334, 691, 1331, 1889
AcuI	CTGAAG	2 cut(s)	1266, 1815
AcyI	GRCGYC	3 cut(s)	628, 1762, 1796
AfaI	GTAC	3 cut(s)	963, 1967, 2020
AfiI	CCNNNNNNNGG	4 cut(s)	965, 1835, 2292, 2293
AflIII	ACRYGT	2 cut(s)	399, 756
AjiI	CACGTC	1 cut(s)	2263
AjnI	CCWGG	4 cut(s)	142, 499, 964, 1918
Alw21I	GWGCWC	2 cut(s)	1649, 1779
Alw26I	GTCTC	5 cut(s)	421, 778, 1356, 1619, 2134
AlwI	GGATC	3 cut(s)	47, 1846, 1850
AlwNI	CAGNNNCTG	1 cut(s)	2198
AoxI	GGCC	2 cut(s)	950, 1985
ApaI	GGGCCC	1 cut(s)	1989
ApeKI	GCWGC	7 cut(s)	67, 932, 998, 1168, 1655, 2201, 2297
ApoI	RAATTY	5 cut(s)	35, 334, 691, 1331, 1889
ArsI	GACNNNNNNTTYG	4 cut(s)	871, 903, 1316, 1348
Asp700I	GAANNNNTTC	3 cut(s)	273, 1507, 1828
AspLEI	GCGC	1 cut(s)	1798
AspS9I	GGNCC	8 cut(s)	887, 1491, 1604, 1805, 1916, 1985, 1986, 2340
AsuC2I	CCSGG	1 cut(s)	2337
AsuHPI	GGTGA	5 cut(s)	1214, 1306, 1704, 1771, 2364
AsuII	TTCGAA	2 cut(s)	259, 616
AvaII	GGWCC	6 cut(s)	887, 1491, 1604, 1805, 1916, 2340
BaeGI	GKGCMC	1 cut(s)	1989
BalI	TGGCCA	1 cut(s)	952
BanI	GGYRCC	1 cut(s)	1795
BanII	GRGCYC	3 cut(s)	1209, 1779, 1989
BbsI	GAAGAC	4 cut(s)	266, 623, 1510, 1526
Bbv12I	GWGCWC	2 cut(s)	1649, 1779
BbvI	GCAGC	7 cut(s)	79, 919, 985, 1180, 1642, 2188, 2309
BccI	CCATC	4 cut(s)	22, 1325, 1595, 2171
BceAI	ACGGC	1 cut(s)	1775
BcgI	CGANNNNNNTGC	4 cut(s)	200, 234, 557, 591
BciT130I	CCWGG	4 cut(s)	144, 501, 966, 1920
BcnI	CCSGG	1 cut(s)	2337
BcoDI	GTCTC	5 cut(s)	421, 778, 1356, 1619, 2134
BfaI	CTAG	5 cut(s)	357, 714, 855, 1485, 1821
BfmI	CTRYAG	1 cut(s)	2231
BfoI	RGCGCY	1 cut(s)	1799
BfuAI	ACCTGC	1 cut(s)	1030
BglII	AGATCT	2 cut(s)	1135, 2227
BisI	GCNGC	7 cut(s)	68, 933, 999, 1169, 1656, 2202, 2298
BlsI	GCNGC	7 cut(s)	69, 934, 1000, 1170, 1657, 2203, 2299
Bme1390I	CCNGG	5 cut(s)	144, 501, 966, 1920, 2337
Bme18I	GGWCC	6 cut(s)	887, 1491, 1604, 1805, 1916, 2340
BmgBI	CACGTC	1 cut(s)	2263
BmgT120I	GGNCC	8 cut(s)	887, 1491, 1604, 1805, 1916, 1985, 1986, 2340
BmiI	GGNNCC	6 cut(s)	888, 1083, 1797, 1987, 2341, 2342
BmrFI	CCNGG	5 cut(s)	144, 501, 966, 1920, 2337
BmsI	GCATC	6 cut(s)	220, 577, 1079, 1155, 1690, 2369
BpiI	GAAGAC	4 cut(s)	266, 623, 1510, 1526
Bpu14I	TTCGAA	2 cut(s)	259, 616
BpuEI	CTTGAG	3 cut(s)	208, 565, 941
BpuMI	CCSGG	1 cut(s)	2337
BsaHI	GRCGYC	3 cut(s)	628, 1762, 1796
BsaJI	CCNNGG	6 cut(s)	1715, 1919, 2000, 2256, 2336, 2375
BsaWI	WCCGGW	3 cut(s)	252, 609, 1511
Bsc4I	CCNNNNNNNGG	4 cut(s)	965, 1835, 2292, 2293
Bse118I	RCCGGY	1 cut(s)	1470
Bse1I	ACTGG	2 cut(s)	1504, 1958
Bse3DI	GCAATG	1 cut(s)	77
BseBI	CCWGG	4 cut(s)	144, 501, 966, 1920
BseDI	CCNNGG	6 cut(s)	1715, 1919, 2000, 2256, 2336, 2375
BseGI	GGATG	5 cut(s)	1056, 1070, 1317, 1713, 1947
BseLI	CCNNNNNNNGG	4 cut(s)	965, 1835, 2292, 2293
BseMI	GCAATG	1 cut(s)	77
BseMII	CTCAG	4 cut(s)	300, 657, 1053, 1146
BseNI	ACTGG	2 cut(s)	1504, 1958
BseRI	GAGGAG	5 cut(s)	179, 536, 1739, 1851, 1854
BseSI	GKGCMC	1 cut(s)	1989
BseXI	GCAGC	7 cut(s)	79, 919, 985, 1180, 1642, 2188, 2309
BseYI	CCCAGC	4 cut(s)	207, 564, 1338, 1703
BshFI	GGCC	2 cut(s)	952, 1987
BshNI	GGYRCC	1 cut(s)	1795
BsiHKAI	GWGCWC	2 cut(s)	1649, 1779
BsiSI	CCGG	5 cut(s)	253, 610, 1471, 1512, 2336
BslFI	GGGAC	3 cut(s)	639, 1094, 2353
BslI	CCNNNNNNNGG	4 cut(s)	965, 1835, 2292, 2293
BsmAI	GTCTC	5 cut(s)	421, 778, 1356, 1619, 2134
BsmFI	GGGAC	3 cut(s)	639, 1094, 2353
BsmI	GAATGC	4 cut(s)	228, 585, 1000, 1585
BsnI	GGCC	2 cut(s)	952, 1987
Bsp119I	TTCGAA	2 cut(s)	259, 616
Bsp120I	GGGCCC	1 cut(s)	1985
Bsp1286I	GDGCHC	4 cut(s)	1209, 1649, 1779, 1989
Bsp1407I	TGTACA	1 cut(s)	1965
Bsp143I	GATC	9 cut(s)	52, 103, 303, 660, 1135, 1838, 1855, 1946, 2227
Bsp19I	CCATGG	1 cut(s)	2000
BspACI	CCGC	4 cut(s)	265, 622, 1972, 2345
BspANI	GGCC	2 cut(s)	952, 1987
BspCNI	CTCAG	4 cut(s)	301, 658, 1052, 1145
BspHI	TCATGA	5 cut(s)	232, 589, 1126, 1354, 1617
BspLI	GGNNCC	6 cut(s)	888, 1083, 1797, 1987, 2341, 2342
BspMAI	CTGCAG	1 cut(s)	2235
BspMI	ACCTGC	1 cut(s)	1030
BspPI	GGATC	3 cut(s)	47, 1846, 1850
BspQI	GCTCTTC	1 cut(s)	2307
BspT104I	TTCGAA	2 cut(s)	259, 616
BspT107I	GGYRCC	1 cut(s)	1795
BsrDI	GCAATG	1 cut(s)	77
BsrFI	RCCGGY	1 cut(s)	1470
BsrGI	TGTACA	1 cut(s)	1965
BsrI	ACTGG	2 cut(s)	1504, 1958
BssAI	RCCGGY	1 cut(s)	1470
BssECI	CCNNGG	6 cut(s)	1715, 1919, 2000, 2256, 2336, 2375
BssMI	GATC	9 cut(s)	52, 103, 303, 660, 1135, 1838, 1855, 1946, 2227
BssNI	GRCGYC	3 cut(s)	628, 1762, 1796
BssT1I	CCWWGG	3 cut(s)	2000, 2256, 2375
Bst2UI	CCWGG	4 cut(s)	144, 501, 966, 1920
Bst4CI	ACNGT	5 cut(s)	239, 596, 644, 845, 2023
Bst6I	CTCTTC	3 cut(s)	123, 480, 2307
BstACI	GRCGYC	3 cut(s)	628, 1762, 1796
BstAUI	TGTACA	1 cut(s)	1965
BstBI	TTCGAA	2 cut(s)	259, 616
BstC8I	GCNNGC	3 cut(s)	1034, 2058, 2235
BstDEI	CTNAG	5 cut(s)	309, 666, 1039, 1132, 1665
BstDSI	CCRYGG	2 cut(s)	1715, 2000
BstENI	CCTNNNNNAGG	1 cut(s)	1833
BstF5I	GGATG	5 cut(s)	1056, 1070, 1317, 1713, 1947
BstH2I	RGCGCY	1 cut(s)	1799
BstHHI	GCGC	1 cut(s)	1798
BstKTI	GATC	9 cut(s)	55, 106, 306, 663, 1138, 1841, 1858, 1949, 2230
BstMAI	GTCTC	5 cut(s)	421, 778, 1356, 1619, 2134
BstMBI	GATC	9 cut(s)	52, 103, 303, 660, 1135, 1838, 1855, 1946, 2227
BstMWI	GCNNNNNNNGC	4 cut(s)	979, 1348, 1978, 2187
BstNI	CCWGG	4 cut(s)	144, 501, 966, 1920
BstNSI	RCATGY	2 cut(s)	403, 760
BstSCI	CCNGG	5 cut(s)	142, 499, 964, 1918, 2335
BstSFI	CTRYAG	1 cut(s)	2231
BstSLI	GKGCMC	1 cut(s)	1989
BstV1I	GCAGC	7 cut(s)	79, 919, 985, 1180, 1642, 2188, 2309
BstV2I	GAAGAC	4 cut(s)	266, 623, 1510, 1526
BstX2I	RGATCY	3 cut(s)	1135, 1838, 2227
BstXI	CCANNNNNNTGG	1 cut(s)	1792
BstYI	RGATCY	3 cut(s)	1135, 1838, 2227
BsuRI	GGCC	2 cut(s)	952, 1987
BtgI	CCRYGG	2 cut(s)	1715, 2000
BtgZI	GCGATG	1 cut(s)	2346
BtrI	CACGTC	1 cut(s)	2263
BtsCI	GGATG	5 cut(s)	1056, 1070, 1317, 1713, 1947
BtsIMutI	CAGTG	4 cut(s)	30, 306, 649, 663
BveI	ACCTGC	1 cut(s)	1030
Cac8I	GCNNGC	3 cut(s)	1034, 2058, 2235
CaiI	CAGNNNCTG	1 cut(s)	2198
CciI	TCATGA	5 cut(s)	232, 589, 1126, 1354, 1617
CfoI	GCGC	1 cut(s)	1798
Cfr10I	RCCGGY	1 cut(s)	1470
Cfr13I	GGNCC	8 cut(s)	887, 1491, 1604, 1805, 1916, 1985, 1986, 2340
CseI	GACGC	1 cut(s)	1751
CsiI	ACCWGGT	3 cut(s)	142, 499, 964
Csp6I	GTAC	3 cut(s)	962, 1966, 2019
CviQI	GTAC	3 cut(s)	962, 1966, 2019
DdeI	CTNAG	5 cut(s)	309, 666, 1039, 1132, 1665
DinI	GGCGCC	1 cut(s)	1797
DpnI	GATC	9 cut(s)	54, 105, 305, 662, 1137, 1840, 1857, 1948, 2229
DpnII	GATC	9 cut(s)	52, 103, 303, 660, 1135, 1838, 1855, 1946, 2227
EaeI	YGGCCR	1 cut(s)	950
Eam1104I	CTCTTC	3 cut(s)	123, 480, 2307
EarI	CTCTTC	3 cut(s)	123, 480, 2307
Ecl136II	GAGCTC	1 cut(s)	1777
Eco130I	CCWWGG	3 cut(s)	2000, 2256, 2375
Eco24I	GRGCYC	3 cut(s)	1209, 1779, 1989
Eco47I	GGWCC	6 cut(s)	887, 1491, 1604, 1805, 1916, 2340
Eco53kI	GAGCTC	1 cut(s)	1777
Eco57I	CTGAAG	2 cut(s)	1266, 1815
EcoICRI	GAGCTC	1 cut(s)	1777
EcoNI	CCTNNNNNAGG	1 cut(s)	1833
EcoO109I	RGGNCCY	5 cut(s)	887, 1491, 1916, 1985, 2340
EcoRII	CCWGG	4 cut(s)	142, 499, 964, 1918
EcoT14I	CCWWGG	3 cut(s)	2000, 2256, 2375
EcoT38I	GRGCYC	3 cut(s)	1209, 1779, 1989
EgeI	GGCGCC	1 cut(s)	1797
EheI	GGCGCC	1 cut(s)	1797
ErhI	CCWWGG	3 cut(s)	2000, 2256, 2375
FaqI	GGGAC	3 cut(s)	639, 1094, 2353
FauI	CCCGC	3 cut(s)	258, 615, 2352
FblI	GTMKAC	1 cut(s)	1516
Fnu4HI	GCNGC	7 cut(s)	68, 933, 999, 1169, 1656, 2202, 2298
FokI	GGATG	5 cut(s)	1057, 1063, 1304, 1720, 1954
FriOI	GRGCYC	3 cut(s)	1209, 1779, 1989
Fsp4HI	GCNGC	7 cut(s)	68, 933, 999, 1169, 1656, 2202, 2298
FspBI	CTAG	5 cut(s)	357, 714, 855, 1485, 1821
GlaI	GCGC	1 cut(s)	1797
GluI	GCNGC	7 cut(s)	68, 933, 999, 1169, 1656, 2202, 2298
GsaI	CCCAGC	4 cut(s)	211, 568, 1342, 1707
HaeII	RGCGCY	1 cut(s)	1799
HaeIII	GGCC	2 cut(s)	952, 1987
HapII	CCGG	5 cut(s)	253, 610, 1471, 1512, 2336
HgaI	GACGC	1 cut(s)	1751
HhaI	GCGC	1 cut(s)	1798
Hin1I	GRCGYC	3 cut(s)	628, 1762, 1796
Hin6I	GCGC	1 cut(s)	1796
HinP1I	GCGC	1 cut(s)	1796
HincII	GTYRAC	1 cut(s)	1744
HindII	GTYRAC	1 cut(s)	1744
HindIII	AAGCTT	1 cut(s)	47
HpaI	GTTAAC	1 cut(s)	1744
HpaII	CCGG	5 cut(s)	253, 610, 1471, 1512, 2336
HphI	GGTGA	5 cut(s)	1214, 1306, 1704, 1771, 2364
Hpy166II	GTNNAC	3 cut(s)	1012, 1517, 1744
Hpy8I	GTNNAC	3 cut(s)	1012, 1517, 1744
HpyCH4III	ACNGT	5 cut(s)	239, 596, 644, 845, 2023
HpyCH4IV	ACGT	4 cut(s)	271, 628, 2262, 2369
HpyCH4V	TGCA	8 cut(s)	67, 1070, 1168, 1658, 1981, 2233, 2266, 2360
HpyF10VI	GCNNNNNNNGC	4 cut(s)	979, 1348, 1978, 2187
HpyF3I	CTNAG	5 cut(s)	309, 666, 1039, 1132, 1665
HpySE526I	ACGT	4 cut(s)	271, 628, 2262, 2369
Hsp92I	GRCGYC	3 cut(s)	628, 1762, 1796
HspAI	GCGC	1 cut(s)	1796
KasI	GGCGCC	1 cut(s)	1795
KflI	GGGWCCC	1 cut(s)	2340
KspAI	GTTAAC	1 cut(s)	1744
Kzo9I	GATC	9 cut(s)	52, 103, 303, 660, 1135, 1838, 1855, 1946, 2227
LguI	GCTCTTC	1 cut(s)	2307
Lsp1109I	GCAGC	7 cut(s)	79, 919, 985, 1180, 1642, 2188, 2309
LweI	GCATC	6 cut(s)	220, 577, 1079, 1155, 1690, 2369
MabI	ACCWGGT	3 cut(s)	142, 499, 964
MaeI	CTAG	5 cut(s)	357, 714, 855, 1485, 1821
MaeII	ACGT	4 cut(s)	271, 628, 2262, 2369
MalI	GATC	9 cut(s)	54, 105, 305, 662, 1137, 1840, 1857, 1948, 2229
MboI	GATC	9 cut(s)	52, 103, 303, 660, 1135, 1838, 1855, 1946, 2227
MflI	RGATCY	3 cut(s)	1135, 1838, 2227
MhlI	GDGCHC	4 cut(s)	1209, 1649, 1779, 1989
MlsI	TGGCCA	1 cut(s)	952
MluCI	AATT	9 cut(s)	35, 334, 691, 831, 1331, 1889, 2064, 2105, 2355
MluNI	TGGCCA	1 cut(s)	952
Mly113I	GGCGCC	1 cut(s)	1796
MlyI	GAGTC	5 cut(s)	13, 1124, 1736, 2040, 2189
MmeI	TCCRAC	3 cut(s)	12, 1426, 2082
Mox20I	TGGCCA	1 cut(s)	952
MroXI	GAANNNNTTC	3 cut(s)	273, 1507, 1828
MscI	TGGCCA	1 cut(s)	952
MseI	TTAA	9 cut(s)	417, 774, 1410, 1551, 1592, 1743, 1815, 2067, 2087
Msp20I	TGGCCA	1 cut(s)	952
MspI	CCGG	5 cut(s)	253, 610, 1471, 1512, 2336
MspR9I	CCNGG	5 cut(s)	144, 501, 966, 1920, 2337
Mva1269I	GAATGC	4 cut(s)	228, 585, 1000, 1585
MvaI	CCWGG	4 cut(s)	144, 501, 966, 1920
MwoI	GCNNNNNNNGC	4 cut(s)	979, 1348, 1978, 2187
NarI	GGCGCC	1 cut(s)	1796
NciI	CCSGG	1 cut(s)	2337
NcoI	CCATGG	1 cut(s)	2000
NdeII	GATC	9 cut(s)	52, 103, 303, 660, 1135, 1838, 1855, 1946, 2227
NlaIV	GGNNCC	6 cut(s)	888, 1083, 1797, 1987, 2341, 2342
NmuCI	GTSAC	3 cut(s)	837, 1710, 2370
NspI	RCATGY	2 cut(s)	403, 760
NspV	TTCGAA	2 cut(s)	259, 616
PagI	TCATGA	5 cut(s)	232, 589, 1126, 1354, 1617
PaqCI	CACCTGC	1 cut(s)	1030
PciI	ACATGT	2 cut(s)	399, 756
PciSI	GCTCTTC	1 cut(s)	2307
PctI	GAATGC	4 cut(s)	228, 585, 1000, 1585
PdmI	GAANNNNTTC	3 cut(s)	273, 1507, 1828
PfeI	GAWTC	7 cut(s)	59, 197, 217, 554, 574, 1064, 2120
PkrI	GCNGC	7 cut(s)	69, 934, 1000, 1170, 1657, 2203, 2299
PleI	GAGTC	5 cut(s)	12, 1124, 1735, 2040, 2189
PluTI	GGCGCC	1 cut(s)	1799
PpsI	GAGTC	5 cut(s)	12, 1124, 1735, 2040, 2189
PpuMI	RGGWCCY	4 cut(s)	887, 1491, 1916, 2340
PscI	ACATGT	2 cut(s)	399, 756
Psp124BI	GAGCTC	1 cut(s)	1779
Psp5II	RGGWCCY	4 cut(s)	887, 1491, 1916, 2340
Psp6I	CCWGG	4 cut(s)	142, 499, 964, 1918
PspFI	CCCAGC	4 cut(s)	207, 564, 1338, 1703
PspGI	CCWGG	4 cut(s)	142, 499, 964, 1918
PspN4I	GGNNCC	6 cut(s)	888, 1083, 1797, 1987, 2341, 2342
PspOMI	GGGCCC	1 cut(s)	1985
PspPI	GGNCC	8 cut(s)	887, 1491, 1604, 1805, 1916, 1985, 1986, 2340
PspPPI	RGGWCCY	4 cut(s)	887, 1491, 1916, 2340
PstI	CTGCAG	1 cut(s)	2235
PstNI	CAGNNNCTG	1 cut(s)	2198
PsuI	RGATCY	3 cut(s)	1135, 1838, 2227
RsaI	GTAC	3 cut(s)	963, 1967, 2020
RsaNI	GTAC	3 cut(s)	962, 1966, 2019
SacI	GAGCTC	1 cut(s)	1779
SapI	GCTCTTC	1 cut(s)	2307
SaqAI	TTAA	9 cut(s)	417, 774, 1410, 1551, 1592, 1743, 1815, 2067, 2087
SatI	GCNGC	7 cut(s)	68, 933, 999, 1169, 1656, 2202, 2298
Sau3AI	GATC	9 cut(s)	52, 103, 303, 660, 1135, 1838, 1855, 1946, 2227
Sau96I	GGNCC	8 cut(s)	887, 1491, 1604, 1805, 1916, 1985, 1986, 2340
SchI	GAGTC	5 cut(s)	13, 1124, 1736, 2040, 2189
ScrFI	CCNGG	5 cut(s)	144, 501, 966, 1920, 2337
SduI	GDGCHC	4 cut(s)	1209, 1649, 1779, 1989
SexAI	ACCWGGT	3 cut(s)	142, 499, 964
SfaNI	GCATC	6 cut(s)	220, 577, 1079, 1155, 1690, 2369
SfcI	CTRYAG	1 cut(s)	2231
SfoI	GGCGCC	1 cut(s)	1797
SfuI	TTCGAA	2 cut(s)	259, 616
SinI	GGWCC	6 cut(s)	887, 1491, 1604, 1805, 1916, 2340
SmlI	CTYRAG	3 cut(s)	223, 580, 920
SmoI	CTYRAG	3 cut(s)	223, 580, 920
Sse9I	AATT	9 cut(s)	35, 334, 691, 831, 1331, 1889, 2064, 2105, 2355
SsiI	CCGC	4 cut(s)	265, 622, 1972, 2345
SspDI	GGCGCC	1 cut(s)	1795
SspMI	CTAG	5 cut(s)	357, 714, 855, 1485, 1821
SstI	GAGCTC	1 cut(s)	1779
StyD4I	CCNGG	5 cut(s)	142, 499, 964, 1918, 2335
StyI	CCWWGG	3 cut(s)	2000, 2256, 2375
TaaI	ACNGT	5 cut(s)	239, 596, 644, 845, 2023
TaiI	ACGT	4 cut(s)	274, 631, 2265, 2372
TaqI	TCGA	9 cut(s)	259, 392, 421, 616, 749, 778, 1854, 1949, 2093
TasI	AATT	9 cut(s)	35, 334, 691, 831, 1331, 1889, 2064, 2105, 2355
TatI	WGTACW	1 cut(s)	1965
TfiI	GAWTC	7 cut(s)	59, 197, 217, 554, 574, 1064, 2120
Tru1I	TTAA	9 cut(s)	417, 774, 1410, 1551, 1592, 1743, 1815, 2067, 2087
Tru9I	TTAA	9 cut(s)	417, 774, 1410, 1551, 1592, 1743, 1815, 2067, 2087
TscAI	CASTG	4 cut(s)	30, 313, 649, 670
TseFI	GTSAC	3 cut(s)	837, 1710, 2370
TseI	GCWGC	7 cut(s)	67, 932, 998, 1168, 1655, 2201, 2297
Tsp45I	GTSAC	3 cut(s)	837, 1710, 2370
TspDTI	ATGAA	8 cut(s)	177, 221, 534, 578, 1115, 1343, 1371, 1902
TspGWI	ACGGA	5 cut(s)	190, 547, 1409, 1836, 1863
TspRI	CASTG	4 cut(s)	30, 313, 649, 670
VpaK11BI	GGWCC	6 cut(s)	887, 1491, 1604, 1805, 1916, 2340
XagI	CCTNNNNNAGG	1 cut(s)	1833
XapI	RAATTY	5 cut(s)	35, 334, 691, 1331, 1889
XceI	RCATGY	2 cut(s)	403, 760
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1789
XmiI	GTMKAC	1 cut(s)	1516
XmnI	GAANNNNTTC	3 cut(s)	273, 1507, 1828
XspI	CTAG	5 cut(s)	357, 714, 855, 1485, 1821
ZraI	GACGTC	1 cut(s)	629

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.