Belongs to the iron ascorbate-dependent oxidoreductase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom05g26900 |
| rosa_multiflora | Rmu_sc0000059.1_g000008 Rmu_sc0038764.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00063910 |
| rosa_samantha | Rh5BG094600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 172 |
| AclWI | GGATC | 1 cut(s) | 47 |
| AcsI | RAATTY | 1 cut(s) | 68 |
| AfaI | GTAC | 1 cut(s) | 152 |
| AgsI | TTSAA | 3 cut(s) | 61, 130, 166 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 182, 214 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 138, 170 |
| AluBI | AGCT | 3 cut(s) | 14, 99, 181 |
| AluI | AGCT | 3 cut(s) | 14, 99, 181 |
| Alw21I | GWGCWC | 1 cut(s) | 9 |
| AlwI | GGATC | 1 cut(s) | 47 |
| ApoI | RAATTY | 1 cut(s) | 68 |
| AspS9I | GGNCC | 2 cut(s) | 86, 202 |
| AsuHPI | GGTGA | 1 cut(s) | 31 |
| AvaII | GGWCC | 2 cut(s) | 86, 202 |
| Bbv12I | GWGCWC | 1 cut(s) | 9 |
| BccI | CCATC | 1 cut(s) | 136 |
| BceAI | ACGGC | 1 cut(s) | 159 |
| Bme18I | GGWCC | 2 cut(s) | 86, 202 |
| BmgT120I | GGNCC | 2 cut(s) | 86, 202 |
| BmiI | GGNNCC | 1 cut(s) | 215 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 26, 58 |
| BpmI | CTGGAG | 1 cut(s) | 200 |
| BsaBI | GATNNNNATC | 1 cut(s) | 44 |
| Bse1I | ACTGG | 1 cut(s) | 89 |
| Bse8I | GATNNNNATC | 1 cut(s) | 44 |
| BseGI | GGATG | 1 cut(s) | 147 |
| BseJI | GATNNNNATC | 1 cut(s) | 44 |
| BseMII | CTCAG | 1 cut(s) | 18 |
| BseNI | ACTGG | 1 cut(s) | 89 |
| BsiHKAI | GWGCWC | 1 cut(s) | 9 |
| Bsp1286I | GDGCHC | 1 cut(s) | 9 |
| Bsp143I | GATC | 1 cut(s) | 39 |
| BspACI | CCGC | 1 cut(s) | 172 |
| BspCNI | CTCAG | 1 cut(s) | 19 |
| BspLI | GGNNCC | 1 cut(s) | 215 |
| BspPI | GGATC | 1 cut(s) | 47 |
| BsrI | ACTGG | 1 cut(s) | 89 |
| BssMI | GATC | 1 cut(s) | 39 |
| Bst4CI | ACNGT | 2 cut(s) | 126, 150 |
| BstDEI | CTNAG | 1 cut(s) | 27 |
| BstF5I | GGATG | 1 cut(s) | 147 |
| BstKTI | GATC | 1 cut(s) | 42 |
| BstMBI | GATC | 1 cut(s) | 39 |
| BstX2I | RGATCY | 1 cut(s) | 39 |
| BstYI | RGATCY | 1 cut(s) | 39 |
| BtsCI | GGATG | 1 cut(s) | 147 |
| BtsIMutI | CAGTG | 2 cut(s) | 96, 122 |
| Cfr13I | GGNCC | 2 cut(s) | 86, 202 |
| Csp6I | GTAC | 1 cut(s) | 151 |
| CviJI | RGCY | 4 cut(s) | 14, 99, 181, 214 |
| CviKI_1 | RGCY | 4 cut(s) | 14, 99, 181, 214 |
| CviQI | GTAC | 1 cut(s) | 151 |
| DdeI | CTNAG | 1 cut(s) | 27 |
| DpnI | GATC | 1 cut(s) | 41 |
| DpnII | GATC | 1 cut(s) | 39 |
| Eco47I | GGWCC | 2 cut(s) | 86, 202 |
| FaiI | YATR | 3 cut(s) | 17, 53, 196 |
| FauI | CCCGC | 1 cut(s) | 179 |
| FokI | GGATG | 1 cut(s) | 154 |
| GsuI | CTGGAG | 1 cut(s) | 200 |
| HphI | GGTGA | 1 cut(s) | 31 |
| Hpy166II | GTNNAC | 1 cut(s) | 22 |
| Hpy188I | TCNGA | 1 cut(s) | 28 |
| Hpy188III | TCNNGA | 1 cut(s) | 217 |
| Hpy8I | GTNNAC | 1 cut(s) | 22 |
| Hpy99I | CGWCG | 1 cut(s) | 188 |
| HpyCH4III | ACNGT | 2 cut(s) | 126, 150 |
| HpyCH4IV | ACGT | 1 cut(s) | 153 |
| HpyF3I | CTNAG | 1 cut(s) | 27 |
| HpySE526I | ACGT | 1 cut(s) | 153 |
| Kzo9I | GATC | 1 cut(s) | 39 |
| LmnI | GCTCC | 2 cut(s) | 4, 219 |
| LpnPI | CCDG | 3 cut(s) | 102, 109, 123 |
| MaeII | ACGT | 1 cut(s) | 153 |
| MaeIII | GTNAC | 1 cut(s) | 91 |
| MalI | GATC | 1 cut(s) | 41 |
| MboI | GATC | 1 cut(s) | 39 |
| MboII | GAAGA | 1 cut(s) | 49 |
| MflI | RGATCY | 1 cut(s) | 39 |
| MhlI | GDGCHC | 1 cut(s) | 9 |
| MluCI | AATT | 3 cut(s) | 68, 81, 226 |
| MnlI | CCTC | 3 cut(s) | 30, 67, 204 |
| NdeII | GATC | 1 cut(s) | 39 |
| NlaIV | GGNNCC | 1 cut(s) | 215 |
| NmuCI | GTSAC | 1 cut(s) | 91 |
| PspN4I | GGNNCC | 1 cut(s) | 215 |
| PspPI | GGNCC | 2 cut(s) | 86, 202 |
| PsuI | RGATCY | 1 cut(s) | 39 |
| RsaI | GTAC | 1 cut(s) | 152 |
| RsaNI | GTAC | 1 cut(s) | 151 |
| Sau3AI | GATC | 1 cut(s) | 39 |
| Sau96I | GGNCC | 2 cut(s) | 86, 202 |
| SduI | GDGCHC | 1 cut(s) | 9 |
| SetI | ASST | 4 cut(s) | 16, 101, 156, 183 |
| SinI | GGWCC | 2 cut(s) | 86, 202 |
| Sse9I | AATT | 3 cut(s) | 68, 81, 226 |
| SsiI | CCGC | 1 cut(s) | 172 |
| TaaI | ACNGT | 2 cut(s) | 126, 150 |
| TaiI | ACGT | 1 cut(s) | 156 |
| TaqI | TCGA | 2 cut(s) | 72, 183 |
| TasI | AATT | 3 cut(s) | 68, 81, 226 |
| TscAI | CASTG | 2 cut(s) | 96, 129 |
| TseFI | GTSAC | 1 cut(s) | 91 |
| Tsp45I | GTSAC | 1 cut(s) | 91 |
| TspRI | CASTG | 2 cut(s) | 96, 129 |
| VpaK11BI | GGWCC | 2 cut(s) | 86, 202 |
| XapI | RAATTY | 1 cut(s) | 68 |