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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0115751 |
| rosa_roxburghii | Rroxscaffold_1G00065270 |
| rosa_rugosa | Rorug04G0454100 |
| rosa_samantha | Rh5BG081100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 497 |
| AciI | CCGC | 1 cut(s) | 222 |
| AclWI | GGATC | 3 cut(s) | 88, 252, 292 |
| AcoI | YGGCCR | 1 cut(s) | 132 |
| AcsI | RAATTY | 2 cut(s) | 468, 547 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 587 |
| AgsI | TTSAA | 5 cut(s) | 149, 425, 521, 547, 559 |
| AluBI | AGCT | 4 cut(s) | 42, 217, 390, 462 |
| AluI | AGCT | 4 cut(s) | 42, 217, 390, 462 |
| AlwI | GGATC | 3 cut(s) | 88, 252, 292 |
| Aor13HI | TCCGGA | 1 cut(s) | 497 |
| AoxI | GGCC | 3 cut(s) | 90, 132, 427 |
| ApeKI | GCWGC | 1 cut(s) | 39 |
| ApoI | RAATTY | 2 cut(s) | 468, 547 |
| AspS9I | GGNCC | 1 cut(s) | 590 |
| AsuC2I | CCSGG | 1 cut(s) | 161 |
| AvaII | GGWCC | 1 cut(s) | 590 |
| BbvI | GCAGC | 1 cut(s) | 51 |
| BcnI | CCSGG | 1 cut(s) | 161 |
| BfaI | CTAG | 3 cut(s) | 63, 366, 383 |
| BisI | GCNGC | 2 cut(s) | 40, 223 |
| BlpI | GCTNAGC | 1 cut(s) | 458 |
| BlsI | GCNGC | 2 cut(s) | 41, 224 |
| Bme1390I | CCNGG | 1 cut(s) | 161 |
| Bme18I | GGWCC | 1 cut(s) | 590 |
| BmgT120I | GGNCC | 1 cut(s) | 590 |
| BmrFI | CCNGG | 1 cut(s) | 161 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 458 |
| BpuMI | CCSGG | 1 cut(s) | 161 |
| BsaJI | CCNNGG | 2 cut(s) | 118, 568 |
| BsaWI | WCCGGW | 2 cut(s) | 353, 497 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 587 |
| Bse1I | ACTGG | 1 cut(s) | 589 |
| BseAI | TCCGGA | 1 cut(s) | 497 |
| BseDI | CCNNGG | 2 cut(s) | 118, 568 |
| BseGI | GGATG | 3 cut(s) | 156, 169, 266 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 587 |
| BseMII | CTCAG | 1 cut(s) | 472 |
| BseNI | ACTGG | 1 cut(s) | 589 |
| BseXI | GCAGC | 1 cut(s) | 51 |
| Bsh1285I | CGRYCG | 1 cut(s) | 51 |
| BshFI | GGCC | 3 cut(s) | 92, 134, 429 |
| BsiEI | CGRYCG | 1 cut(s) | 51 |
| BsiSI | CCGG | 4 cut(s) | 89, 161, 354, 498 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 587 |
| BsnI | GGCC | 3 cut(s) | 92, 134, 429 |
| Bsp13I | TCCGGA | 1 cut(s) | 497 |
| Bsp143I | GATC | 3 cut(s) | 80, 244, 284 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 458 |
| BspACI | CCGC | 1 cut(s) | 222 |
| BspANI | GGCC | 3 cut(s) | 92, 134, 429 |
| BspCNI | CTCAG | 1 cut(s) | 471 |
| BspEI | TCCGGA | 1 cut(s) | 497 |
| BspPI | GGATC | 3 cut(s) | 88, 252, 292 |
| BsrI | ACTGG | 1 cut(s) | 589 |
| BssECI | CCNNGG | 2 cut(s) | 118, 568 |
| BssMI | GATC | 3 cut(s) | 80, 244, 284 |
| BssT1I | CCWWGG | 2 cut(s) | 118, 568 |
| Bst4CI | ACNGT | 2 cut(s) | 49, 344 |
| BstDEI | CTNAG | 3 cut(s) | 278, 311, 458 |
| BstEII | GGTNACC | 1 cut(s) | 209 |
| BstF5I | GGATG | 3 cut(s) | 156, 169, 266 |
| BstKTI | GATC | 3 cut(s) | 83, 247, 287 |
| BstMBI | GATC | 3 cut(s) | 80, 244, 284 |
| BstMCI | CGRYCG | 1 cut(s) | 51 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 36 |
| BstPI | GGTNACC | 1 cut(s) | 209 |
| BstSCI | CCNGG | 1 cut(s) | 159 |
| BstV1I | GCAGC | 1 cut(s) | 51 |
| BstX2I | RGATCY | 2 cut(s) | 244, 284 |
| BstYI | RGATCY | 2 cut(s) | 244, 284 |
| BsuRI | GGCC | 3 cut(s) | 92, 134, 429 |
| BtsCI | GGATG | 3 cut(s) | 156, 169, 266 |
| Cfr13I | GGNCC | 1 cut(s) | 590 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 58, 93 |
| CviAII | CATG | 1 cut(s) | 58 |
| CviJI | RGCY | 8 cut(s) | 42, 92, 134, 217, 225, 390, 429, 462 |
| CviKI_1 | RGCY | 8 cut(s) | 42, 92, 134, 217, 225, 390, 429, 462 |
| DdeI | CTNAG | 3 cut(s) | 278, 311, 458 |
| DpnI | GATC | 3 cut(s) | 82, 246, 286 |
| DpnII | GATC | 3 cut(s) | 80, 244, 284 |
| DraI | TTTAAA | 1 cut(s) | 258 |
| EaeI | YGGCCR | 1 cut(s) | 132 |
| Eco130I | CCWWGG | 2 cut(s) | 118, 568 |
| Eco147I | AGGCCT | 1 cut(s) | 429 |
| Eco47I | GGWCC | 1 cut(s) | 590 |
| Eco91I | GGTNACC | 1 cut(s) | 209 |
| EcoO65I | GGTNACC | 1 cut(s) | 209 |
| EcoT14I | CCWWGG | 2 cut(s) | 118, 568 |
| ErhI | CCWWGG | 2 cut(s) | 118, 568 |
| FaeI | CATG | 1 cut(s) | 61 |
| FaiI | YATR | 9 cut(s) | 19, 26, 59, 207, 230, 323, 329, 362, 485 |
| FatI | CATG | 1 cut(s) | 57 |
| Fnu4HI | GCNGC | 2 cut(s) | 40, 223 |
| FokI | GGATG | 3 cut(s) | 143, 176, 253 |
| Fsp4HI | GCNGC | 2 cut(s) | 40, 223 |
| FspBI | CTAG | 3 cut(s) | 63, 366, 383 |
| GluI | GCNGC | 2 cut(s) | 40, 223 |
| HaeIII | GGCC | 3 cut(s) | 92, 134, 429 |
| HapII | CCGG | 4 cut(s) | 89, 161, 354, 498 |
| Hin1II | CATG | 1 cut(s) | 61 |
| HincII | GTYRAC | 1 cut(s) | 176 |
| HindII | GTYRAC | 1 cut(s) | 176 |
| HindIII | AAGCTT | 1 cut(s) | 388 |
| HinfI | GANTC | 3 cut(s) | 379, 505, 521 |
| HpaII | CCGG | 4 cut(s) | 89, 161, 354, 498 |
| Hpy166II | GTNNAC | 2 cut(s) | 176, 590 |
| Hpy188III | TCNNGA | 2 cut(s) | 383, 498 |
| Hpy8I | GTNNAC | 2 cut(s) | 176, 590 |
| HpyAV | CCTTC | 2 cut(s) | 243, 419 |
| HpyCH4III | ACNGT | 2 cut(s) | 49, 344 |
| HpyCH4V | TGCA | 1 cut(s) | 109 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 36 |
| HpyF3I | CTNAG | 3 cut(s) | 278, 311, 458 |
| Hsp92II | CATG | 1 cut(s) | 61 |
| Kpn2I | TCCGGA | 1 cut(s) | 497 |
| Kzo9I | GATC | 3 cut(s) | 80, 244, 284 |
| LpnPI | CCDG | 6 cut(s) | 102, 174, 227, 367, 511, 570 |
| Lsp1109I | GCAGC | 1 cut(s) | 51 |
| MaeI | CTAG | 3 cut(s) | 63, 366, 383 |
| MaeIII | GTNAC | 3 cut(s) | 209, 344, 513 |
| MalI | GATC | 3 cut(s) | 82, 246, 286 |
| MboI | GATC | 3 cut(s) | 80, 244, 284 |
| MflI | RGATCY | 2 cut(s) | 244, 284 |
| MluCI | AATT | 7 cut(s) | 31, 71, 84, 439, 468, 490, 547 |
| MnlI | CCTC | 2 cut(s) | 103, 403 |
| MroI | TCCGGA | 1 cut(s) | 497 |
| MseI | TTAA | 3 cut(s) | 74, 197, 257 |
| MspI | CCGG | 4 cut(s) | 89, 161, 354, 498 |
| MspR9I | CCNGG | 1 cut(s) | 161 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 36 |
| NciI | CCSGG | 1 cut(s) | 161 |
| NdeII | GATC | 3 cut(s) | 80, 244, 284 |
| NlaIII | CATG | 1 cut(s) | 61 |
| NmuCI | GTSAC | 2 cut(s) | 344, 513 |
| PceI | AGGCCT | 1 cut(s) | 429 |
| PfeI | GAWTC | 3 cut(s) | 379, 505, 521 |
| PfoI | TCCNGGA | 1 cut(s) | 159 |
| PkrI | GCNGC | 2 cut(s) | 41, 224 |
| PspEI | GGTNACC | 1 cut(s) | 209 |
| PspPI | GGNCC | 1 cut(s) | 590 |
| PsuI | RGATCY | 2 cut(s) | 244, 284 |
| SaqAI | TTAA | 3 cut(s) | 74, 197, 257 |
| SatI | GCNGC | 2 cut(s) | 40, 223 |
| Sau3AI | GATC | 3 cut(s) | 80, 244, 284 |
| Sau96I | GGNCC | 1 cut(s) | 590 |
| ScrFI | CCNGG | 1 cut(s) | 161 |
| SinI | GGWCC | 1 cut(s) | 590 |
| Sse9I | AATT | 7 cut(s) | 31, 71, 84, 439, 468, 490, 547 |
| SseBI | AGGCCT | 1 cut(s) | 429 |
| SsiI | CCGC | 1 cut(s) | 222 |
| SspI | AATATT | 1 cut(s) | 13 |
| SspMI | CTAG | 3 cut(s) | 63, 366, 383 |
| StuI | AGGCCT | 1 cut(s) | 429 |
| StyD4I | CCNGG | 1 cut(s) | 159 |
| StyI | CCWWGG | 2 cut(s) | 118, 568 |
| TaaI | ACNGT | 2 cut(s) | 49, 344 |
| TasI | AATT | 7 cut(s) | 31, 71, 84, 439, 468, 490, 547 |
| TauI | GCSGC | 1 cut(s) | 225 |
| TfiI | GAWTC | 3 cut(s) | 379, 505, 521 |
| Tru1I | TTAA | 3 cut(s) | 74, 197, 257 |
| Tru9I | TTAA | 3 cut(s) | 74, 197, 257 |
| TseFI | GTSAC | 2 cut(s) | 344, 513 |
| TseI | GCWGC | 1 cut(s) | 39 |
| Tsp45I | GTSAC | 2 cut(s) | 344, 513 |
| TspDTI | ATGAA | 1 cut(s) | 180 |
| VpaK11BI | GGWCC | 1 cut(s) | 590 |
| XapI | RAATTY | 2 cut(s) | 468, 547 |
| XbaI | TCTAGA | 1 cut(s) | 382 |
| XspI | CTAG | 3 cut(s) | 63, 366, 383 |