Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0018406

Physical Location & Seq

Genomic Coordinates Forward (+)

87017498 .. 87021520

Gene Structure 4023 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00065330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGCCACAAGGAAAGTTACTCTTTCAGGTAAAAGAGAGACGACAGTCCTCGATCAGTCACAAAATTATGGCGGAAGATGAATCCACGCGGTACTTGGAAGAGCTCCGCCATCTCCGGAGCATGGCCAACCACCCCAGCATCATCAACCTCCTTTCCTCTGAGATTTCCAGTTTGGAAAAGGATCAATCTCCACCACTACCGCCCCAATCTTCACCACCGCGCCTCAGCCAAGAGGCCGCGTCAGCAGCTGAGAAGACTAATGTCACGGCAAGATCATGCGGCAAGAAATATGTAGCAAGTGAAGATGAAAAGGATCCGACGAAATACTATGAAAACAGGCTGAATTACATTGCTACCCTGACAAATCCATATCCCCATGAATCCTCTGTTTCAAAGAGTATAACTGAATATGTGAAGGAGTATGAAGGCCTCCTCAAGGACCAACAAGGGGTGCATCTTGAGAATGTCACAGAATCCTTGGCTGGAATGGTCATGAAACAAAGATCCTCCGGCCCAGGGTGTTTCTTTTATGATTTATGTGGTGATCGAGCTCGAGTACAAATTTATGCTAGTGCCAGCAATTCGGATATGGATAAATCTGAATTTGTTAAGATCCACTCTAATGTGAAGCGCGGTGACATTGTTAATGTGACCGGGTTTCCAGGTAAAACAATGAGTGGCCAGATCAGCATTTTTGCAAGATCATTTGTAGTCTTAGCACCTTGTCTCCACATGATGCCTACTGTCAATCCAAAGAAAATAACTGAGGAAACTGAAGAATGGGGTCCCGGACGTCCCAGGAATCCTGAAACATACAGTTTAAAAGACCAGGAAACTCGATATCGTCAGCGTCACCTGGATTTAAGGATAAACCCTGATGTTCAACGTATAGTGGTGGAGACCAGGAGTGAGATCACTTTCTATATTAGGAGGTTTCTTCATAGTCGTCAGTTCCGTGAAGTTGAAACTCCAATATTGAACACGACTGCTGGTGGAGCAACTGCGCGTCCTTTTATGACGCATCACAATGAACTTGACATGCAACTTTACATGCGCATTGCACCCGAGCTCTATCTTAAACAGCTAGTTGTTGGTGGAATTGAACGCGTTTTTGAGATAGGCAAACAGTTTAGGAATGAGGGTATTGATCTGACACATAATCCTGAGTTCGCAACCTGTGAATTCTATCAGGCTTATGCAGACTATAATCACATGATGGAGCTCACTGAGGAAATGTTGAGTGGAATGGTCAAGGAACTTACAGGTGGATATAAGATTATGTATCATTCAAATGGACTTGATAAGGATCCAATTGAGATAGACTTCACACCCCCTTTCACACGGATTGACATGATTGAAGAATTAAATAAGATTGCAAATCTTGAAATAAATCCGGAGGATCTCTTCAGTGAGGAAGCTAACAGTGATCTAAAGGTCGCGTGCAAGAAGTATGGGATCCAATGTCCACCTCCTGAAACAACAACTCGTTTATTGGACAAGCTTGTTGATCACTTTTTGGAAGAGCAATGTGTGAATCCAACATTTATAATCAACCATCCTGAGATAATGAGTCCATTGGCAAAGTGGCATCGATCAAGACCTGGCTTGACAGAACGCTTTGAATTGTTTGTCAGTAAGCATGAGCTTTGTAATGGATACACTGAACTGAATAATCCTTTTGTCCAACGCCAACGATTCGCTAATCAACTCAAGGATAGACAATCCGGTGATGATGAAGCAATGCCTTTGGATGAAGGGTTTTGTAGAGCTCTTGAATATGGATTACCTCCAACAGGTGGTGTGGGAATAGGCATTGACCGCCTTTGTATGCTTTTAACTGATTCTGTGAACATTAAGGAAGTCATCCCCTTCCCAACCATGAAGCCACAGGATCAGCCTTCAGCTAGACCCAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0009506 GO:0016874 GO:0016875 GO:0030054 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0140098 GO:0140101

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2 tRNA_anti-codon

Protein Analysis

638

Amino Acids

72.82

Weight (kDa)

5.73

Isoelectric Point (pI)

56.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_anti-codon	PF01336	159 - 239	3e-08	OB-fold nucleic acid binding domain
tRNA-synt_2	PF00152	276 - 627	3.3e-90	tRNA synthetases class II (D, K and N)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0018406)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g37790
rosa_chinensis	RchiOBHm_Chr5g0011081
rosa_laevigata	RLG00000031808
rosa_multiflora	Rmu_sc0003242.1_g000009
rosa_roxburghii	Rroxscaffold_1G00065330
rosa_rugosa	Rorug04G0455100 Rorug04G0455100
rosa_samantha	Rh5DG081700
rosa_wichuraiana	Rw0G000170 Rw0G017780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1547
AatII	GACGTC	1 cut(s)	796
Acc16I	TGCGCA	1 cut(s)	1055
AccB7I	CCANNNNNTGG	1 cut(s)	1796
AccII	CGCG	7 cut(s)	88, 220, 239, 633, 1006, 1107, 1439
AccIII	TCCGGA	2 cut(s)	114, 1393
AciI	CCGC	9 cut(s)	71, 88, 106, 200, 218, 237, 279, 633, 1819
AcoI	YGGCCR	2 cut(s)	123, 679
AcsI	RAATTY	3 cut(s)	561, 602, 1181
AcuI	CTGAAG	3 cut(s)	795, 1390, 1884
AcyI	GRCGYC	1 cut(s)	793
AfaI	GTAC	2 cut(s)	92, 558
AfiI	CCNNNNNNNGG	6 cut(s)	121, 436, 448, 516, 1793, 1796
AflIII	ACRYGT	1 cut(s)	1105
AjnI	CCWGG	7 cut(s)	514, 661, 797, 828, 855, 902, 1600
Alw21I	GWGCWC	5 cut(s)	105, 553, 1071, 1224, 1771
Alw26I	GTCTC	3 cut(s)	31, 731, 893
AlwNI	CAGNNNCTG	1 cut(s)	248
Ama87I	CYCGRG	2 cut(s)	552, 1064
Aor13HI	TCCGGA	2 cut(s)	114, 1393
AoxI	GGCC	5 cut(s)	123, 234, 427, 511, 679
ApeKI	GCWGC	1 cut(s)	245
ApoI	RAATTY	3 cut(s)	561, 602, 1181
AspLEI	GCGC	4 cut(s)	222, 633, 1006, 1056
AspS9I	GGNCC	3 cut(s)	439, 512, 785
AsuC2I	CCSGG	2 cut(s)	655, 789
AsuHPI	GGTGA	5 cut(s)	204, 554, 647, 845, 1739
AvaI	CYCGRG	2 cut(s)	552, 1064
AvaII	GGWCC	2 cut(s)	439, 785
BalI	TGGCCA	2 cut(s)	125, 681
BamHI	GGATCC	3 cut(s)	313, 1306, 1455
BanII	GRGCYC	5 cut(s)	105, 553, 1071, 1224, 1771
BbsI	GAAGAC	1 cut(s)	260
Bbv12I	GWGCWC	5 cut(s)	105, 553, 1071, 1224, 1771
BbvCI	CCTCAGC	1 cut(s)	224
BbvI	GCAGC	1 cut(s)	257
BccI	CCATC	3 cut(s)	117, 1210, 1563
BceAI	ACGGC	1 cut(s)	282
BciT130I	CCWGG	7 cut(s)	516, 663, 799, 830, 857, 904, 1602
BciVI	GTATCC	1 cut(s)	1649
BclI	TGATCA	1 cut(s)	1507
BcnI	CCSGG	2 cut(s)	655, 789
BcoDI	GTCTC	3 cut(s)	31, 731, 893
BfaI	CTAG	4 cut(s)	570, 1085, 1905, 1915
BfuI	GTATCC	1 cut(s)	1649
BisI	GCNGC	3 cut(s)	237, 246, 280
BlsI	GCNGC	3 cut(s)	238, 247, 281
Bme1390I	CCNGG	9 cut(s)	516, 655, 663, 789, 799, 830, 857, 904, 1602
Bme18I	GGWCC	2 cut(s)	439, 785
BmeT110I	CYCGRG	2 cut(s)	552, 1064
BmgT120I	GGNCC	3 cut(s)	439, 512, 785
BmiI	GGNNCC	5 cut(s)	315, 786, 787, 1308, 1457
BmrFI	CCNGG	9 cut(s)	516, 655, 663, 789, 799, 830, 857, 904, 1602
BmsI	GCATC	5 cut(s)	147, 463, 726, 1030, 1597
BoxI	GACNNNNGTC	2 cut(s)	43, 260
BpiI	GAAGAC	1 cut(s)	260
Bpu10I	CCTNAGC	1 cut(s)	224
BpuEI	CTTGAG	3 cut(s)	419, 479, 1694
BpuMI	CCSGG	2 cut(s)	655, 789
Bsa29I	ATCGAT	1 cut(s)	1591
BsaBI	GATNNNNATC	1 cut(s)	1305
BsaHI	GRCGYC	1 cut(s)	793
BsaI	GGTCTC	1 cut(s)	893
BsaJI	CCNNGG	4 cut(s)	477, 514, 515, 797
BsaWI	WCCGGW	3 cut(s)	114, 1393, 1724
BsaXI	ACNNNNNCTCC	2 cut(s)	711, 741
Bsc4I	CCNNNNNNNGG	6 cut(s)	121, 436, 448, 516, 1793, 1796
Bse1I	ACTGG	1 cut(s)	168
Bse3DI	GCAATG	4 cut(s)	348, 1056, 1532, 1746
Bse8I	GATNNNNATC	1 cut(s)	1305
BseAI	TCCGGA	2 cut(s)	114, 1393
BseBI	CCWGG	7 cut(s)	516, 663, 799, 830, 857, 904, 1602
BseCI	ATCGAT	1 cut(s)	1591
BseDI	CCNNGG	4 cut(s)	477, 514, 515, 797
BseGI	GGATG	3 cut(s)	1555, 1756, 1863
BseJI	GATNNNNATC	1 cut(s)	1305
BseLI	CCNNNNNNNGG	6 cut(s)	121, 436, 448, 516, 1793, 1796
BseMI	GCAATG	4 cut(s)	348, 1056, 1532, 1746
BseMII	CTCAG	7 cut(s)	150, 238, 240, 756, 1155, 1218, 1551
BseNI	ACTGG	1 cut(s)	168
BseRI	GAGGAG	1 cut(s)	422
BseXI	GCAGC	1 cut(s)	257
BseYI	CCCAGC	2 cut(s)	134, 1910
Bsh1236I	CGCG	7 cut(s)	88, 220, 239, 633, 1006, 1107, 1439
BshFI	GGCC	5 cut(s)	125, 236, 429, 513, 681
BshVI	ATCGAT	1 cut(s)	1591
BsiHKAI	GWGCWC	5 cut(s)	105, 553, 1071, 1224, 1771
BsiHKCI	CYCGRG	2 cut(s)	552, 1064
BsiSI	CCGG	6 cut(s)	115, 510, 654, 789, 1394, 1725
BslFI	GGGAC	2 cut(s)	771, 780
BslI	CCNNNNNNNGG	6 cut(s)	121, 436, 448, 516, 1793, 1796
BsmAI	GTCTC	3 cut(s)	31, 731, 893
BsmBI	CGTCTC	1 cut(s)	31
BsmFI	GGGAC	2 cut(s)	771, 780
BsnI	GGCC	5 cut(s)	125, 236, 429, 513, 681
Bso31I	GGTCTC	1 cut(s)	893
BsoBI	CYCGRG	2 cut(s)	552, 1064
Bsp1286I	GDGCHC	5 cut(s)	105, 553, 1071, 1224, 1771
Bsp13I	TCCGGA	2 cut(s)	114, 1393
BspACI	CCGC	9 cut(s)	71, 88, 106, 200, 218, 237, 279, 633, 1819
BspANI	GGCC	5 cut(s)	125, 236, 429, 513, 681
BspCNI	CTCAG	7 cut(s)	151, 237, 241, 757, 1156, 1219, 1552
BspDI	ATCGAT	1 cut(s)	1591
BspEI	TCCGGA	2 cut(s)	114, 1393
BspFNI	CGCG	7 cut(s)	88, 220, 239, 633, 1006, 1107, 1439
BspHI	TCATGA	1 cut(s)	492
BspLI	GGNNCC	5 cut(s)	315, 786, 787, 1308, 1457
BspQI	GCTCTTC	2 cut(s)	93, 1515
BspTNI	GGTCTC	1 cut(s)	893
BsrDI	GCAATG	4 cut(s)	348, 1056, 1532, 1746
BsrI	ACTGG	1 cut(s)	168
BssECI	CCNNGG	4 cut(s)	477, 514, 515, 797
BssNI	GRCGYC	1 cut(s)	793
BssT1I	CCWWGG	1 cut(s)	477
Bst2UI	CCWGG	7 cut(s)	516, 663, 799, 830, 857, 904, 1602
Bst4CI	ACNGT	5 cut(s)	45, 745, 818, 1128, 1424
Bst6I	CTCTTC	3 cut(s)	93, 1409, 1515
BstACI	GRCGYC	1 cut(s)	793
BstC8I	GCNNGC	2 cut(s)	577, 1441
BstDEI	CTNAG	8 cut(s)	159, 224, 249, 715, 765, 1164, 1227, 1560
BstENI	CCTNNNNNAGG	2 cut(s)	434, 1791
BstF5I	GGATG	3 cut(s)	1555, 1756, 1863
BstFNI	CGCG	7 cut(s)	88, 220, 239, 633, 1006, 1107, 1439
BstHHI	GCGC	4 cut(s)	222, 633, 1006, 1056
BstMAI	GTCTC	3 cut(s)	31, 731, 893
BstMWI	GCNNNNNNNGC	5 cut(s)	242, 245, 687, 995, 1818
BstNI	CCWGG	7 cut(s)	516, 663, 799, 830, 857, 904, 1602
BstNSI	RCATGY	2 cut(s)	1042, 1054
BstPAI	GACNNNNGTC	2 cut(s)	43, 260
BstSCI	CCNGG	9 cut(s)	514, 653, 661, 787, 797, 828, 855, 902, 1600
BstUI	CGCG	7 cut(s)	88, 220, 239, 633, 1006, 1107, 1439
BstV1I	GCAGC	1 cut(s)	257
BstV2I	GAAGAC	1 cut(s)	260
BstX2I	RGATCY	6 cut(s)	313, 503, 612, 1306, 1399, 1455
BstYI	RGATCY	6 cut(s)	313, 503, 612, 1306, 1399, 1455
Bsu15I	ATCGAT	1 cut(s)	1591
BsuI	GTATCC	1 cut(s)	1649
BsuRI	GGCC	5 cut(s)	125, 236, 429, 513, 681
BsuTUI	ATCGAT	1 cut(s)	1591
BtsCI	GGATG	3 cut(s)	1555, 1756, 1863
BtsIMutI	CAGTG	4 cut(s)	1224, 1414, 1429, 1659
Cac8I	GCNNGC	2 cut(s)	577, 1441
CaiI	CAGNNNCTG	1 cut(s)	248
CciI	TCATGA	1 cut(s)	492
CfoI	GCGC	4 cut(s)	222, 633, 1006, 1056
Cfr13I	GGNCC	3 cut(s)	439, 512, 785
ClaI	ATCGAT	1 cut(s)	1591
CseI	GACGC	4 cut(s)	228, 839, 995, 1027
Csp6I	GTAC	2 cut(s)	91, 557
CviQI	GTAC	2 cut(s)	91, 557
DdeI	CTNAG	8 cut(s)	159, 224, 249, 715, 765, 1164, 1227, 1560
DraI	TTTAAA	1 cut(s)	822
EaeI	YGGCCR	2 cut(s)	123, 679
Eam1104I	CTCTTC	3 cut(s)	93, 1409, 1515
EarI	CTCTTC	3 cut(s)	93, 1409, 1515
EciI	GGCGGA	2 cut(s)	86, 95
Ecl136II	GAGCTC	5 cut(s)	103, 551, 1069, 1222, 1769
Eco130I	CCWWGG	1 cut(s)	477
Eco147I	AGGCCT	1 cut(s)	429
Eco24I	GRGCYC	5 cut(s)	105, 553, 1071, 1224, 1771
Eco31I	GGTCTC	1 cut(s)	893
Eco32I	GATATC	1 cut(s)	842
Eco47I	GGWCC	2 cut(s)	439, 785
Eco53kI	GAGCTC	5 cut(s)	103, 551, 1069, 1222, 1769
Eco57I	CTGAAG	3 cut(s)	795, 1390, 1884
Eco88I	CYCGRG	2 cut(s)	552, 1064
EcoICRI	GAGCTC	5 cut(s)	103, 551, 1069, 1222, 1769
EcoNI	CCTNNNNNAGG	2 cut(s)	434, 1791
EcoO109I	RGGNCCY	1 cut(s)	785
EcoRI	GAATTC	1 cut(s)	1181
EcoRII	CCWGG	7 cut(s)	514, 661, 797, 828, 855, 902, 1600
EcoRV	GATATC	1 cut(s)	842
EcoT14I	CCWWGG	1 cut(s)	477
EcoT38I	GRGCYC	5 cut(s)	105, 553, 1071, 1224, 1771
ErhI	CCWWGG	1 cut(s)	477
Esp3I	CGTCTC	1 cut(s)	31
FalI	AAGNNNNNCTT	1 cut(s)	37
FaqI	GGGAC	2 cut(s)	771, 780
FbaI	TGATCA	1 cut(s)	1507
Fnu4HI	GCNGC	3 cut(s)	237, 246, 280
FokI	GGATG	3 cut(s)	1542, 1763, 1850
FriOI	GRGCYC	5 cut(s)	105, 553, 1071, 1224, 1771
Fsp4HI	GCNGC	3 cut(s)	237, 246, 280
FspAI	RTGCGCAY	1 cut(s)	1055
FspBI	CTAG	4 cut(s)	570, 1085, 1905, 1915
FspI	TGCGCA	1 cut(s)	1055
GlaI	GCGC	4 cut(s)	221, 632, 1005, 1055
GluI	GCNGC	3 cut(s)	237, 246, 280
GsaI	CCCAGC	2 cut(s)	138, 1914
HaeIII	GGCC	5 cut(s)	125, 236, 429, 513, 681
HapII	CCGG	6 cut(s)	115, 510, 654, 789, 1394, 1725
HgaI	GACGC	4 cut(s)	228, 839, 995, 1027
HhaI	GCGC	4 cut(s)	222, 633, 1006, 1056
Hin1I	GRCGYC	1 cut(s)	793
Hin6I	GCGC	4 cut(s)	220, 631, 1004, 1054
HinP1I	GCGC	4 cut(s)	220, 631, 1004, 1054
HindIII	AAGCTT	1 cut(s)	1499
HinfI	GANTC	8 cut(s)	80, 380, 473, 802, 1534, 1570, 1695, 1841
HpaII	CCGG	6 cut(s)	115, 510, 654, 789, 1394, 1725
HphI	GGTGA	5 cut(s)	204, 554, 647, 845, 1739
Hpy166II	GTNNAC	2 cut(s)	1466, 1849
Hpy188I	TCNGA	5 cut(s)	160, 318, 586, 601, 1152
Hpy8I	GTNNAC	2 cut(s)	1466, 1849
Hpy99I	CGWCG	1 cut(s)	322
HpyAV	CCTTC	5 cut(s)	409, 419, 1748, 1879, 1908
HpyCH4III	ACNGT	5 cut(s)	45, 745, 818, 1128, 1424
HpyCH4IV	ACGT	2 cut(s)	793, 886
HpyCH4V	TGCA	7 cut(s)	454, 698, 1042, 1061, 1199, 1376, 1443
HpyF10VI	GCNNNNNNNGC	5 cut(s)	242, 245, 687, 995, 1818
HpyF3I	CTNAG	8 cut(s)	159, 224, 249, 715, 765, 1164, 1227, 1560
HpySE526I	ACGT	2 cut(s)	793, 886
Hsp92I	GRCGYC	1 cut(s)	793
HspAI	GCGC	4 cut(s)	220, 631, 1004, 1054
KflI	GGGWCCC	1 cut(s)	785
Kpn2I	TCCGGA	2 cut(s)	114, 1393
Ksp22I	TGATCA	1 cut(s)	1507
LguI	GCTCTTC	2 cut(s)	93, 1515
LmnI	GCTCC	4 cut(s)	108, 117, 995, 1219
Lsp1109I	GCAGC	1 cut(s)	257
LweI	GCATC	5 cut(s)	147, 463, 726, 1030, 1597
MaeI	CTAG	4 cut(s)	570, 1085, 1905, 1915
MaeII	ACGT	2 cut(s)	793, 886
MaeIII	GTNAC	7 cut(s)	15, 56, 262, 466, 635, 649, 851
MfeI	CAATTG	1 cut(s)	1311
MflI	RGATCY	6 cut(s)	313, 503, 612, 1306, 1399, 1455
MhlI	GDGCHC	5 cut(s)	105, 553, 1071, 1224, 1771
MlsI	TGGCCA	2 cut(s)	125, 681
MluI	ACGCGT	1 cut(s)	1105
MluNI	TGGCCA	2 cut(s)	125, 681
MlyI	GAGTC	1 cut(s)	1579
MmeI	TCCRAC	4 cut(s)	341, 1562, 1708, 1814
Mox20I	TGGCCA	2 cut(s)	125, 681
MroI	TCCGGA	2 cut(s)	114, 1393
MscI	TGGCCA	2 cut(s)	125, 681
MseI	TTAA	8 cut(s)	609, 645, 821, 863, 1077, 1364, 1835, 1854
MslI	CAYNNNNRTG	3 cut(s)	621, 1026, 1290
Msp20I	TGGCCA	2 cut(s)	125, 681
MspA1I	CMGCKG	1 cut(s)	248
MspI	CCGG	6 cut(s)	115, 510, 654, 789, 1394, 1725
MspR9I	CCNGG	9 cut(s)	516, 655, 663, 789, 799, 830, 857, 904, 1602
MunI	CAATTG	1 cut(s)	1311
MvaI	CCWGG	7 cut(s)	516, 663, 799, 830, 857, 904, 1602
MvnI	CGCG	7 cut(s)	88, 220, 239, 633, 1006, 1107, 1439
MwoI	GCNNNNNNNGC	5 cut(s)	242, 245, 687, 995, 1818
NciI	CCSGG	2 cut(s)	655, 789
NlaIV	GGNNCC	5 cut(s)	315, 786, 787, 1308, 1457
NmuCI	GTSAC	6 cut(s)	56, 262, 466, 635, 649, 851
NsbI	TGCGCA	1 cut(s)	1055
NspI	RCATGY	2 cut(s)	1042, 1054
PaeR7I	CTCGAG	1 cut(s)	552
PagI	TCATGA	1 cut(s)	492
PasI	CCCWGGG	1 cut(s)	515
PceI	AGGCCT	1 cut(s)	429
PciSI	GCTCTTC	2 cut(s)	93, 1515
PcsI	WCGNNNNNNNCGW	1 cut(s)	952
PfeI	GAWTC	7 cut(s)	80, 380, 473, 802, 1534, 1695, 1841
PflMI	CCANNNNNTGG	1 cut(s)	1796
PfoI	TCCNGGA	1 cut(s)	787
PkrI	GCNGC	3 cut(s)	238, 247, 281
PleI	GAGTC	1 cut(s)	1578
PpsI	GAGTC	1 cut(s)	1578
PpuMI	RGGWCCY	1 cut(s)	785
PshAI	GACNNNNGTC	2 cut(s)	43, 260
PsiI	TTATAA	1 cut(s)	1547
Psp124BI	GAGCTC	5 cut(s)	105, 553, 1071, 1224, 1771
Psp5II	RGGWCCY	1 cut(s)	785
Psp6I	CCWGG	7 cut(s)	514, 661, 797, 828, 855, 902, 1600
PspFI	CCCAGC	2 cut(s)	134, 1910
PspGI	CCWGG	7 cut(s)	514, 661, 797, 828, 855, 902, 1600
PspN4I	GGNNCC	5 cut(s)	315, 786, 787, 1308, 1457
PspPI	GGNCC	3 cut(s)	439, 512, 785
PspPPI	RGGWCCY	1 cut(s)	785
PspXI	VCTCGAGB	1 cut(s)	552
PstNI	CAGNNNCTG	1 cut(s)	248
PsuI	RGATCY	6 cut(s)	313, 503, 612, 1306, 1399, 1455
PvuII	CAGCTG	1 cut(s)	248
RsaI	GTAC	2 cut(s)	92, 558
RsaNI	GTAC	2 cut(s)	91, 557
RseI	CAYNNNNRTG	3 cut(s)	621, 1026, 1290
SacI	GAGCTC	5 cut(s)	105, 553, 1071, 1224, 1771
SapI	GCTCTTC	2 cut(s)	93, 1515
SaqAI	TTAA	8 cut(s)	609, 645, 821, 863, 1077, 1364, 1835, 1854
SatI	GCNGC	3 cut(s)	237, 246, 280
Sau96I	GGNCC	3 cut(s)	439, 512, 785
SchI	GAGTC	1 cut(s)	1579
ScrFI	CCNGG	9 cut(s)	516, 655, 663, 789, 799, 830, 857, 904, 1602
SduI	GDGCHC	5 cut(s)	105, 553, 1071, 1224, 1771
SfaNI	GCATC	5 cut(s)	147, 463, 726, 1030, 1597
Sfr274I	CTCGAG	1 cut(s)	552
SinI	GGWCC	2 cut(s)	439, 785
SlaI	CTCGAG	1 cut(s)	552
SmiMI	CAYNNNNRTG	3 cut(s)	621, 1026, 1290
SmlI	CTYRAG	4 cut(s)	434, 458, 552, 1709
SmoI	CTYRAG	4 cut(s)	434, 458, 552, 1709
SseBI	AGGCCT	1 cut(s)	429
SsiI	CCGC	9 cut(s)	71, 88, 106, 200, 218, 237, 279, 633, 1819
SspI	AATATT	1 cut(s)	975
SspMI	CTAG	4 cut(s)	570, 1085, 1905, 1915
SstI	GAGCTC	5 cut(s)	105, 553, 1071, 1224, 1771
StuI	AGGCCT	1 cut(s)	429
StyD4I	CCNGG	9 cut(s)	514, 653, 661, 787, 797, 828, 855, 902, 1600
StyI	CCWWGG	1 cut(s)	477
TaaI	ACNGT	5 cut(s)	45, 745, 818, 1128, 1424
TaiI	ACGT	2 cut(s)	796, 889
TaqI	TCGA	5 cut(s)	50, 547, 553, 838, 1591
TatI	WGTACW	1 cut(s)	556
TauI	GCSGC	2 cut(s)	239, 282
TfiI	GAWTC	7 cut(s)	80, 380, 473, 802, 1534, 1695, 1841
Tru1I	TTAA	8 cut(s)	609, 645, 821, 863, 1077, 1364, 1835, 1854
Tru9I	TTAA	8 cut(s)	609, 645, 821, 863, 1077, 1364, 1835, 1854
TscAI	CASTG	4 cut(s)	1231, 1414, 1429, 1666
TseFI	GTSAC	6 cut(s)	56, 262, 466, 635, 649, 851
TseI	GCWGC	1 cut(s)	245
Tsp45I	GTSAC	6 cut(s)	56, 262, 466, 635, 649, 851
TspGWI	ACGGA	2 cut(s)	944, 1357
TspRI	CASTG	4 cut(s)	1231, 1414, 1429, 1666
Van91I	CCANNNNNTGG	1 cut(s)	1796
VpaK11BI	GGWCC	2 cut(s)	439, 785
XagI	CCTNNNNNAGG	2 cut(s)	434, 1791
XapI	RAATTY	3 cut(s)	561, 602, 1181
XceI	RCATGY	2 cut(s)	1042, 1054
XcmI	CCANNNNNNNNNTGG	2 cut(s)	91, 1581
XhoI	CTCGAG	1 cut(s)	552
XspI	CTAG	4 cut(s)	570, 1085, 1905, 1915
ZraI	GACGTC	1 cut(s)	794

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.