No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g02842 |
| pyrus_communis | pycom14g14600 |
| rosa_roxburghii | Rroxscaffold_2G00095970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 320 |
| AccIII | TCCGGA | 1 cut(s) | 280 |
| AcsI | RAATTY | 2 cut(s) | 239, 308 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 231 |
| AjiI | CACGTC | 1 cut(s) | 248 |
| AluBI | AGCT | 1 cut(s) | 212 |
| AluI | AGCT | 1 cut(s) | 212 |
| Alw26I | GTCTC | 2 cut(s) | 69, 185 |
| Ama87I | CYCGRG | 1 cut(s) | 135 |
| Aor13HI | TCCGGA | 1 cut(s) | 280 |
| ApeKI | GCWGC | 1 cut(s) | 92 |
| ApoI | RAATTY | 2 cut(s) | 239, 308 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 237, 269, 293, 325 |
| AspS9I | GGNCC | 5 cut(s) | 168, 234, 278, 283, 301 |
| AsuHPI | GGTGA | 1 cut(s) | 44 |
| AvaI | CYCGRG | 1 cut(s) | 135 |
| AvaII | GGWCC | 5 cut(s) | 168, 234, 278, 283, 301 |
| BaeGI | GKGCMC | 1 cut(s) | 323 |
| BanI | GGYRCC | 1 cut(s) | 320 |
| BbvI | GCAGC | 1 cut(s) | 104 |
| BcoDI | GTCTC | 2 cut(s) | 69, 185 |
| BisI | GCNGC | 1 cut(s) | 93 |
| BlsI | GCNGC | 1 cut(s) | 94 |
| Bme18I | GGWCC | 5 cut(s) | 168, 234, 278, 283, 301 |
| BmeT110I | CYCGRG | 1 cut(s) | 135 |
| BmgBI | CACGTC | 1 cut(s) | 248 |
| BmgT120I | GGNCC | 5 cut(s) | 168, 234, 278, 283, 301 |
| BmiI | GGNNCC | 4 cut(s) | 170, 235, 303, 322 |
| BmsI | GCATC | 2 cut(s) | 45, 196 |
| BpuEI | CTTGAG | 1 cut(s) | 280 |
| BsaJI | CCNNGG | 1 cut(s) | 136 |
| BsaWI | WCCGGW | 1 cut(s) | 280 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 231 |
| BseAI | TCCGGA | 1 cut(s) | 280 |
| BseDI | CCNNGG | 1 cut(s) | 136 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 231 |
| BseSI | GKGCMC | 1 cut(s) | 323 |
| BseXI | GCAGC | 1 cut(s) | 104 |
| BshNI | GGYRCC | 1 cut(s) | 320 |
| BsiHKCI | CYCGRG | 1 cut(s) | 135 |
| BsiSI | CCGG | 1 cut(s) | 281 |
| BslFI | GGGAC | 1 cut(s) | 32 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 231 |
| BsmAI | GTCTC | 2 cut(s) | 69, 185 |
| BsmFI | GGGAC | 1 cut(s) | 32 |
| BsoBI | CYCGRG | 1 cut(s) | 135 |
| Bsp1286I | GDGCHC | 1 cut(s) | 323 |
| Bsp13I | TCCGGA | 1 cut(s) | 280 |
| BspEI | TCCGGA | 1 cut(s) | 280 |
| BspLI | GGNNCC | 4 cut(s) | 170, 235, 303, 322 |
| BspT107I | GGYRCC | 1 cut(s) | 320 |
| BssECI | CCNNGG | 1 cut(s) | 136 |
| Bst4CI | ACNGT | 2 cut(s) | 108, 206 |
| BstMAI | GTCTC | 2 cut(s) | 69, 185 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 98 |
| BstSLI | GKGCMC | 1 cut(s) | 323 |
| BstV1I | GCAGC | 1 cut(s) | 104 |
| BtrI | CACGTC | 1 cut(s) | 248 |
| Cfr13I | GGNCC | 5 cut(s) | 168, 234, 278, 283, 301 |
| CviAII | CATG | 1 cut(s) | 177 |
| CviJI | RGCY | 4 cut(s) | 198, 212, 253, 295 |
| CviKI_1 | RGCY | 4 cut(s) | 198, 212, 253, 295 |
| Eco47I | GGWCC | 5 cut(s) | 168, 234, 278, 283, 301 |
| Eco88I | CYCGRG | 1 cut(s) | 135 |
| FaeI | CATG | 1 cut(s) | 180 |
| FaiI | YATR | 3 cut(s) | 166, 178, 317 |
| FaqI | GGGAC | 1 cut(s) | 32 |
| FatI | CATG | 1 cut(s) | 176 |
| Fnu4HI | GCNGC | 1 cut(s) | 93 |
| Fsp4HI | GCNGC | 1 cut(s) | 93 |
| GluI | GCNGC | 1 cut(s) | 93 |
| HapII | CCGG | 1 cut(s) | 281 |
| Hin1II | CATG | 1 cut(s) | 180 |
| HindIII | AAGCTT | 1 cut(s) | 210 |
| HinfI | GANTC | 2 cut(s) | 131, 144 |
| HpaII | CCGG | 1 cut(s) | 281 |
| HphI | GGTGA | 1 cut(s) | 44 |
| Hpy188I | TCNGA | 1 cut(s) | 29 |
| Hpy188III | TCNNGA | 2 cut(s) | 135, 281 |
| HpyAV | CCTTC | 1 cut(s) | 56 |
| HpyCH4III | ACNGT | 2 cut(s) | 108, 206 |
| HpyCH4IV | ACGT | 1 cut(s) | 247 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 98 |
| HpySE526I | ACGT | 1 cut(s) | 247 |
| Hsp92II | CATG | 1 cut(s) | 180 |
| Kpn2I | TCCGGA | 1 cut(s) | 280 |
| LpnPI | CCDG | 1 cut(s) | 294 |
| Lsp1109I | GCAGC | 1 cut(s) | 104 |
| LweI | GCATC | 2 cut(s) | 45, 196 |
| MaeII | ACGT | 1 cut(s) | 247 |
| MaeIII | GTNAC | 2 cut(s) | 102, 108 |
| MboII | GAAGA | 4 cut(s) | 16, 19, 41, 42 |
| MhlI | GDGCHC | 1 cut(s) | 323 |
| MluCI | AATT | 2 cut(s) | 239, 308 |
| MmeI | TCCRAC | 2 cut(s) | 108, 181 |
| MnlI | CCTC | 4 cut(s) | 9, 131, 235, 255 |
| MroI | TCCGGA | 1 cut(s) | 280 |
| MseI | TTAA | 1 cut(s) | 267 |
| MspI | CCGG | 1 cut(s) | 281 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 98 |
| NlaIII | CATG | 1 cut(s) | 180 |
| NlaIV | GGNNCC | 4 cut(s) | 170, 235, 303, 322 |
| PfeI | GAWTC | 2 cut(s) | 131, 144 |
| PkrI | GCNGC | 1 cut(s) | 94 |
| PspN4I | GGNNCC | 4 cut(s) | 170, 235, 303, 322 |
| PspPI | GGNCC | 5 cut(s) | 168, 234, 278, 283, 301 |
| SaqAI | TTAA | 1 cut(s) | 267 |
| SatI | GCNGC | 1 cut(s) | 93 |
| Sau96I | GGNCC | 5 cut(s) | 168, 234, 278, 283, 301 |
| SduI | GDGCHC | 1 cut(s) | 323 |
| SetI | ASST | 5 cut(s) | 48, 57, 142, 214, 250 |
| SfaNI | GCATC | 2 cut(s) | 45, 196 |
| SinI | GGWCC | 5 cut(s) | 168, 234, 278, 283, 301 |
| SmlI | CTYRAG | 1 cut(s) | 259 |
| SmoI | CTYRAG | 1 cut(s) | 259 |
| Sse9I | AATT | 2 cut(s) | 239, 308 |
| TaaI | ACNGT | 2 cut(s) | 108, 206 |
| TaiI | ACGT | 1 cut(s) | 250 |
| TaqI | TCGA | 2 cut(s) | 142, 333 |
| TasI | AATT | 2 cut(s) | 239, 308 |
| TfiI | GAWTC | 2 cut(s) | 131, 144 |
| Tru1I | TTAA | 1 cut(s) | 267 |
| Tru9I | TTAA | 1 cut(s) | 267 |
| TseI | GCWGC | 1 cut(s) | 92 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 5 cut(s) | 168, 234, 278, 283, 301 |
| XapI | RAATTY | 2 cut(s) | 239, 308 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 68, 124, 313 |