No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0093951 |
| rosa_roxburghii | Rroxscaffold_2G00147580 |
| rosa_samantha | Rh2AG087600 Rh2DG086200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 135, 186 |
| AfeI | AGCGCT | 1 cut(s) | 44 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 207 |
| AgsI | TTSAA | 2 cut(s) | 29, 320 |
| AjnI | CCWGG | 2 cut(s) | 299, 408 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 323, 355 |
| Alw21I | GWGCWC | 1 cut(s) | 109 |
| Aor51HI | AGCGCT | 1 cut(s) | 44 |
| AoxI | GGCC | 1 cut(s) | 20 |
| ApeKI | GCWGC | 2 cut(s) | 132, 188 |
| AspLEI | GCGC | 2 cut(s) | 45, 299 |
| AspS9I | GGNCC | 1 cut(s) | 20 |
| Bbv12I | GWGCWC | 1 cut(s) | 109 |
| BbvI | GCAGC | 2 cut(s) | 119, 200 |
| BceAI | ACGGC | 1 cut(s) | 176 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 31 |
| BciT130I | CCWGG | 2 cut(s) | 301, 410 |
| BfoI | RGCGCY | 2 cut(s) | 46, 300 |
| BisI | GCNGC | 3 cut(s) | 133, 136, 189 |
| BlsI | GCNGC | 3 cut(s) | 134, 137, 190 |
| Bme1390I | CCNGG | 2 cut(s) | 301, 410 |
| BmgT120I | GGNCC | 1 cut(s) | 20 |
| BmiI | GGNNCC | 2 cut(s) | 21, 374 |
| BmrFI | CCNGG | 2 cut(s) | 301, 410 |
| BmsI | GCATC | 1 cut(s) | 46 |
| BsaJI | CCNNGG | 2 cut(s) | 408, 441 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 207 |
| Bse1I | ACTGG | 1 cut(s) | 374 |
| BseBI | CCWGG | 2 cut(s) | 301, 410 |
| BseDI | CCNNGG | 2 cut(s) | 408, 441 |
| BseGI | GGATG | 2 cut(s) | 61, 71 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 207 |
| BseMII | CTCAG | 1 cut(s) | 284 |
| BseNI | ACTGG | 1 cut(s) | 374 |
| BseRI | GAGGAG | 3 cut(s) | 159, 428, 458 |
| BseXI | GCAGC | 2 cut(s) | 119, 200 |
| BsgI | GTGCAG | 1 cut(s) | 256 |
| Bsh1285I | CGRYCG | 1 cut(s) | 174 |
| BshFI | GGCC | 1 cut(s) | 22 |
| BsiEI | CGRYCG | 1 cut(s) | 174 |
| BsiHKAI | GWGCWC | 1 cut(s) | 109 |
| BslFI | GGGAC | 2 cut(s) | 223, 403 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 207 |
| BsmFI | GGGAC | 2 cut(s) | 223, 403 |
| BsnI | GGCC | 1 cut(s) | 22 |
| Bsp1286I | GDGCHC | 1 cut(s) | 109 |
| BspACI | CCGC | 2 cut(s) | 135, 186 |
| BspANI | GGCC | 1 cut(s) | 22 |
| BspCNI | CTCAG | 1 cut(s) | 285 |
| BspLI | GGNNCC | 2 cut(s) | 21, 374 |
| BsrI | ACTGG | 1 cut(s) | 374 |
| BssECI | CCNNGG | 2 cut(s) | 408, 441 |
| Bst2UI | CCWGG | 2 cut(s) | 301, 410 |
| Bst4CI | ACNGT | 1 cut(s) | 245 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 129 |
| BstC8I | GCNNGC | 3 cut(s) | 41, 90, 94 |
| BstDEI | CTNAG | 1 cut(s) | 293 |
| BstF5I | GGATG | 2 cut(s) | 61, 71 |
| BstH2I | RGCGCY | 2 cut(s) | 46, 300 |
| BstHHI | GCGC | 2 cut(s) | 45, 299 |
| BstMCI | CGRYCG | 1 cut(s) | 174 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 85, 129 |
| BstNI | CCWGG | 2 cut(s) | 301, 410 |
| BstSCI | CCNGG | 2 cut(s) | 299, 408 |
| BstV1I | GCAGC | 2 cut(s) | 119, 200 |
| BsuRI | GGCC | 1 cut(s) | 22 |
| BtsCI | GGATG | 2 cut(s) | 61, 71 |
| Cac8I | GCNNGC | 3 cut(s) | 41, 90, 94 |
| CfoI | GCGC | 2 cut(s) | 45, 299 |
| Cfr13I | GGNCC | 1 cut(s) | 20 |
| CviAII | CATG | 2 cut(s) | 110, 380 |
| CviJI | RGCY | 8 cut(s) | 22, 79, 96, 138, 191, 407, 440, 451 |
| CviKI_1 | RGCY | 8 cut(s) | 22, 79, 96, 138, 191, 407, 440, 451 |
| DdeI | CTNAG | 1 cut(s) | 293 |
| Eco47III | AGCGCT | 1 cut(s) | 44 |
| EcoRII | CCWGG | 2 cut(s) | 299, 408 |
| FaeI | CATG | 2 cut(s) | 113, 383 |
| FaiI | YATR | 6 cut(s) | 48, 111, 141, 179, 229, 381 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 68, 100 |
| FaqI | GGGAC | 2 cut(s) | 223, 403 |
| FatI | CATG | 2 cut(s) | 109, 379 |
| Fnu4HI | GCNGC | 3 cut(s) | 133, 136, 189 |
| FokI | GGATG | 2 cut(s) | 68, 78 |
| Fsp4HI | GCNGC | 3 cut(s) | 133, 136, 189 |
| GlaI | GCGC | 2 cut(s) | 44, 298 |
| GluI | GCNGC | 3 cut(s) | 133, 136, 189 |
| HaeII | RGCGCY | 2 cut(s) | 46, 300 |
| HaeIII | GGCC | 1 cut(s) | 22 |
| HhaI | GCGC | 2 cut(s) | 45, 299 |
| Hin1II | CATG | 2 cut(s) | 113, 383 |
| Hin6I | GCGC | 2 cut(s) | 43, 297 |
| HinP1I | GCGC | 2 cut(s) | 43, 297 |
| HincII | GTYRAC | 1 cut(s) | 385 |
| HindII | GTYRAC | 1 cut(s) | 385 |
| HinfI | GANTC | 5 cut(s) | 167, 211, 416, 425, 458 |
| Hpy166II | GTNNAC | 1 cut(s) | 385 |
| Hpy188I | TCNGA | 2 cut(s) | 348, 395 |
| Hpy188III | TCNNGA | 1 cut(s) | 462 |
| Hpy8I | GTNNAC | 1 cut(s) | 385 |
| HpyCH4III | ACNGT | 1 cut(s) | 245 |
| HpyCH4V | TGCA | 5 cut(s) | 39, 59, 164, 241, 273 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 85, 129 |
| HpyF3I | CTNAG | 1 cut(s) | 293 |
| Hsp92II | CATG | 2 cut(s) | 113, 383 |
| HspAI | GCGC | 2 cut(s) | 43, 297 |
| LmnI | GCTCC | 2 cut(s) | 104, 146 |
| LpnPI | CCDG | 6 cut(s) | 78, 286, 313, 355, 395, 422 |
| Lsp1109I | GCAGC | 2 cut(s) | 119, 200 |
| LweI | GCATC | 1 cut(s) | 46 |
| MaeIII | GTNAC | 1 cut(s) | 193 |
| MboII | GAAGA | 5 cut(s) | 41, 125, 167, 308, 446 |
| MfeI | CAATTG | 1 cut(s) | 204 |
| MhlI | GDGCHC | 1 cut(s) | 109 |
| MluCI | AATT | 1 cut(s) | 204 |
| MlyI | GAGTC | 2 cut(s) | 205, 425 |
| MnlI | CCTC | 5 cut(s) | 137, 193, 391, 406, 436 |
| MspR9I | CCNGG | 2 cut(s) | 301, 410 |
| MunI | CAATTG | 1 cut(s) | 204 |
| MvaI | CCWGG | 2 cut(s) | 301, 410 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 85, 129 |
| NlaIII | CATG | 2 cut(s) | 113, 383 |
| NlaIV | GGNNCC | 2 cut(s) | 21, 374 |
| PfeI | GAWTC | 3 cut(s) | 167, 425, 458 |
| PkrI | GCNGC | 3 cut(s) | 134, 137, 190 |
| PleI | GAGTC | 2 cut(s) | 205, 424 |
| PpsI | GAGTC | 2 cut(s) | 205, 424 |
| Psp6I | CCWGG | 2 cut(s) | 299, 408 |
| PspGI | CCWGG | 2 cut(s) | 299, 408 |
| PspN4I | GGNNCC | 2 cut(s) | 21, 374 |
| PspPI | GGNCC | 1 cut(s) | 20 |
| SatI | GCNGC | 3 cut(s) | 133, 136, 189 |
| Sau96I | GGNCC | 1 cut(s) | 20 |
| SchI | GAGTC | 2 cut(s) | 205, 425 |
| ScrFI | CCNGG | 2 cut(s) | 301, 410 |
| SduI | GDGCHC | 1 cut(s) | 109 |
| SetI | ASST | 2 cut(s) | 185, 341 |
| SfaNI | GCATC | 1 cut(s) | 46 |
| Sse9I | AATT | 1 cut(s) | 204 |
| SsiI | CCGC | 2 cut(s) | 135, 186 |
| StyD4I | CCNGG | 2 cut(s) | 299, 408 |
| TaaI | ACNGT | 1 cut(s) | 245 |
| TaqII | GACCGA | 1 cut(s) | 160 |
| TasI | AATT | 1 cut(s) | 204 |
| TauI | GCSGC | 1 cut(s) | 138 |
| TfiI | GAWTC | 3 cut(s) | 167, 425, 458 |
| TseI | GCWGC | 2 cut(s) | 132, 188 |
| TspDTI | ATGAA | 2 cut(s) | 126, 168 |
| TspGWI | ACGGA | 2 cut(s) | 68, 365 |