Rroxscaffold_2G00148530

) efflux antiporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0007041
Physical Location & Seq
Forward (+)
86183763 .. 86189912
6150 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00148530.1

Sequence Viewer

Length: 1749 bp
ATGAGGCTCCGACTCGCTCTGCTGTGTCTCTGCTTCGTCACTATTCCTCAGCTCGAATCCCCAGTCGCGGCCTCGGCCGAGTCGAACTCGGTGCTGGAGGAGGAGATCAATGCCGAGTCGGAAAACTCATCGCTGGCGAGATCTGGTAACGACAGCTTCGCCAACATGATTGATCGGGCTCTCGAGCGCGAGTTCCCTGAGAACGAGCAAAATCAAGCCGCGGACTCCGGTAGCTTCAATAATAGCGTTAATGAGCAGCAGGCGACTCTAGAGACTGTTGCTAGAGTTAAGTCCAAGAAAAATGACAGCAAGGAGGAGAAGTCATTTCAATTTCATGATGTTTTCCATCTGGAGAATGAGAATGGAGCAGAAGATATGCCTACACTAATAGATCGGAAGGATAATGTTTTTATTATATCCAATCTCAAGTCAAAGTATCCTGTGCTGCAAGTGGACTTGAGACTGATATCAGATCTGGTAGTTGTCATTGTCTCTGCAACATGTGGTGGCATTGCCTTCGCCTGTGCTGGACAACCTGTCATTACTGGATACTTACTAGCAGGATCTGCCATTGGACCTGGAGGCTTGAGTTTTGTCAGTGAAATGGTCCAAGTTGAGACAGTGGCTCAGTTTGGAGTGATATTTCTTCTTTTTGCATTGGGCCTGGAATTCTCAGCTGCTAAGCTTCGGGTTGTTCGAGCAGTGGCTGTTTTGGGAGGTTTACTGCAGACTTTCCTGTTTATGTGCTTGTGTGGAATAACAGCCTCGTTATGTGGTGGAAGACCTTCTGAAGGGGTGTTTGTTGGTGCATTTCTTTCCATGTCTTCGACAGCAGTGGTTTTGAAATTCTTGATGGAAAGAAATAGTATTAATGCTCTTCATGGTCAAGTCACAGTTGGCACTCTTATAATGCAGGACTGTGCTGTGGGTTTGCTATTTGCTCTGCTTCCAGTTCTTGGTGGCACTTCTGGTATTCTTCAAGGAGTAATATCCATGACCAAATCGTTGGTGGTCTTGCTTACATTTTTGGCCACATTATCAATATTATCACGTTCTTGTGTACCATGGTTCCTTAAGCTTATGATAAGCCTATCTTCTCAGACTAATGAACTCTATCAATTGGCAGCTGTGGCATTCTGCTTACTTGTCGCTTGGTGTAGTGATAAGCTGGGTTTAAGTCTTGAACTGGGTTCCTTTGCGGCAGGAGTGATGATATCAACAACTGATCTTGGTCAACATACACTTGAACAGGTTGAGCCCATTCGCAATATGTTTGCTGCTCTTTTTCTCGCTAGCATTGGGATGTTAATAGATGTTCATTTCCTTTGGAATCATGTTGATATTTTATTAGCAGCTGTTACATTGGTAATCATCGTAAAAACTGTAGTGGTTGCTACTGTTGTCAAGGGATTTGGATACAACAACAAGACTTCCCTTCTTGTTGGAATGTCTTTGGCACAAATCGGAGAATTTGCTTTTGTTTTACTAAGCCGCGCTTCTAATCTTCATCTGGTAGAGGTGGGTGCTTCACCTGGTAAACTGTATGTGTTACTTCTAGGCACAACAGCTCTTAGTCTGGTCACTACACCATTGCTGTTCAAGATGATTCCTGCTGTTGTTCATCTTGGGGTGTTGTTGCGGTGGCTCTCCCCTGATAGCCTAAGTGAGATTGGCTTCAAAGGAGATAGCTTTCGCTCAGATGGTGCTAAGCGTATTGCTTTCTTGGTCCAAGAATCTCATCATTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0015075 GO:0015318 GO:0016020 GO:0022857 GO:0022890 GO:0034220 GO:0051179 GO:0051234 GO:0055085 GO:0098655
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Na_H_Exchanger

Protein Analysis

582

Amino Acids

62.45

Weight (kDa)

5.47

Isoelectric Point (pI)

34.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 163 - 534 1.9e-74 Sodium/hydrogen exchanger, transmembrane
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 908
AccB7I CCANNNNNTGG 1 cut(s) 956
AccII CGCG 4 cut(s) 68, 189, 221, 1494
AciI CCGC 6 cut(s) 68, 219, 221, 1199, 1492, 1639
AclWI GGATC 1 cut(s) 571
AcoI YGGCCR 2 cut(s) 75, 1029
AcsI RAATTY 3 cut(s) 668, 845, 1469
AcuI CTGAAG 1 cut(s) 810
AfaI GTAC 1 cut(s) 1062
AfiI CCNNNNNNNGG 3 cut(s) 67, 791, 956
AflII CTTAAG 1 cut(s) 1073
AflIII ACRYGT 1 cut(s) 500
AgsI TTSAA 8 cut(s) 238, 329, 844, 980, 1184, 1247, 1600, 1678
AhdI GACNNNNNGTC 1 cut(s) 536
AjnI CCWGG 3 cut(s) 577, 663, 1531
Alw26I GTCTC 5 cut(s) 32, 266, 454, 496, 611
AlwI GGATC 1 cut(s) 571
AlwNI CAGNNNCTG 2 cut(s) 566, 707
Ama87I CYCGRG 1 cut(s) 182
AoxI GGCC 4 cut(s) 69, 75, 661, 1029
ApeKI GCWGC 6 cut(s) 256, 445, 677, 1124, 1277, 1352
ApoI RAATTY 3 cut(s) 668, 845, 1469
ArsI GACNNNNNNTTYG 2 cut(s) 48, 80
AseI ATTAAT 1 cut(s) 870
Asp700I GAANNNNTTC 1 cut(s) 784
AspLEI GCGC 2 cut(s) 189, 1496
AspS9I GGNCC 4 cut(s) 575, 607, 661, 1726
AsuHPI GGTGA 1 cut(s) 1521
AsuNHI GCTAGC 1 cut(s) 1292
AvaI CYCGRG 1 cut(s) 182
AvaII GGWCC 3 cut(s) 575, 607, 1726
BalI TGGCCA 1 cut(s) 1031
BanII GRGCYC 2 cut(s) 181, 1260
BbsI GAAGAC 2 cut(s) 787, 816
BbvCI CCTCAGC 1 cut(s) 48
BbvI GCAGC 6 cut(s) 268, 432, 664, 1136, 1264, 1364
BccI CCATC 3 cut(s) 354, 847, 1694
BcgI CGANNNNNNTGC 4 cut(s) 73, 107, 499, 533
BciT130I CCWGG 3 cut(s) 579, 665, 1533
BciVI GTATCC 3 cut(s) 447, 542, 1409
BcoDI GTCTC 5 cut(s) 32, 266, 454, 496, 611
BfaI CTAG 5 cut(s) 269, 282, 557, 1293, 1556
BfmI CTRYAG 2 cut(s) 725, 1383
BfrI CTTAAG 1 cut(s) 1073
BfuI GTATCC 3 cut(s) 447, 542, 1409
BglII AGATCT 2 cut(s) 140, 472
BlpI GCTNAGC 2 cut(s) 681, 1707
Bme1390I CCNGG 3 cut(s) 579, 665, 1533
Bme18I GGWCC 3 cut(s) 575, 607, 1726
BmeRI GACNNNNNGTC 1 cut(s) 536
BmeT110I CYCGRG 1 cut(s) 182
BmgT120I GGNCC 4 cut(s) 575, 607, 661, 1726
BmiI GGNNCC 3 cut(s) 8, 1070, 1192
BmrFI CCNGG 3 cut(s) 579, 665, 1533
BmrI ACTGGG 2 cut(s) 56, 1196
BmtI GCTAGC 1 cut(s) 1296
BmuI ACTGGG 2 cut(s) 56, 1196
BpiI GAAGAC 2 cut(s) 787, 816
BplI GAGNNNNNCTC 2 cut(s) 71, 103
BpmI CTGGAG 3 cut(s) 116, 371, 600
Bpu10I CCTNAGC 1 cut(s) 48
Bpu1102I GCTNAGC 2 cut(s) 681, 1707
BpuEI CTTGAG 3 cut(s) 410, 478, 607
BsaJI CCNNGG 3 cut(s) 72, 219, 1064
BsaWI WCCGGW 1 cut(s) 227
BsaXI ACNNNNNCTCC 2 cut(s) 305, 335
Bsc4I CCNNNNNNNGG 3 cut(s) 67, 791, 956
Bse1I ACTGG 4 cut(s) 62, 550, 950, 1191
Bse3DI GCAATG 2 cut(s) 510, 1589
BseBI CCWGG 3 cut(s) 579, 665, 1533
BseDI CCNNGG 3 cut(s) 72, 219, 1064
BseGI GGATG 1 cut(s) 1308
BseLI CCNNNNNNNGG 3 cut(s) 67, 791, 956
BseMI GCAATG 2 cut(s) 510, 1589
BseMII CTCAG 6 cut(s) 62, 189, 641, 687, 1112, 1710
BseNI ACTGG 4 cut(s) 62, 550, 950, 1191
BseRI GAGGAG 3 cut(s) 113, 116, 329
BseX3I CGGCCG 1 cut(s) 75
BseXI GCAGC 6 cut(s) 268, 432, 664, 1136, 1264, 1364
BseYI CCCAGC 1 cut(s) 1168
Bsh1236I CGCG 4 cut(s) 68, 189, 221, 1494
Bsh1285I CGRYCG 1 cut(s) 78
BshFI GGCC 4 cut(s) 71, 77, 663, 1031
BsiEI CGRYCG 1 cut(s) 78
BsiHKCI CYCGRG 1 cut(s) 182
BsiSI CCGG 1 cut(s) 228
BslI CCNNNNNNNGG 3 cut(s) 67, 791, 956
BsmAI GTCTC 5 cut(s) 32, 266, 454, 496, 611
BsmI GAATGC 1 cut(s) 1133
BsnI GGCC 4 cut(s) 71, 77, 663, 1031
BsoBI CYCGRG 1 cut(s) 182
Bsp1286I GDGCHC 2 cut(s) 181, 1260
Bsp143I GATC 7 cut(s) 105, 140, 172, 391, 472, 563, 1225
Bsp1720I GCTNAGC 2 cut(s) 681, 1707
Bsp19I CCATGG 1 cut(s) 1064
BspACI CCGC 6 cut(s) 68, 219, 221, 1199, 1492, 1639
BspANI GGCC 4 cut(s) 71, 77, 663, 1031
BspCNI CTCAG 6 cut(s) 61, 190, 640, 686, 1111, 1709
BspFNI CGCG 4 cut(s) 68, 189, 221, 1494
BspHI TCATGA 1 cut(s) 334
BspLI GGNNCC 3 cut(s) 8, 1070, 1192
BspMAI CTGCAG 1 cut(s) 729
BspOI GCTAGC 1 cut(s) 1296
BspPI GGATC 1 cut(s) 571
BspQI GCTCTTC 1 cut(s) 882
BspTI CTTAAG 1 cut(s) 1073
BsrDI GCAATG 2 cut(s) 510, 1589
BsrI ACTGG 4 cut(s) 62, 550, 950, 1191
BssECI CCNNGG 3 cut(s) 72, 219, 1064
BssMI GATC 7 cut(s) 105, 140, 172, 391, 472, 563, 1225
BssT1I CCWWGG 1 cut(s) 1064
Bst2UI CCWGG 3 cut(s) 579, 665, 1533
Bst4CI ACNGT 7 cut(s) 277, 622, 895, 920, 1384, 1399, 1542
Bst6I CTCTTC 1 cut(s) 882
BstAFI CTTAAG 1 cut(s) 1073
BstAPI GCANNNNNTGC 1 cut(s) 566
BstC8I GCNNGC 3 cut(s) 135, 261, 1294
BstDSI CCRYGG 2 cut(s) 219, 1064
BstENI CCTNNNNNAGG 1 cut(s) 789
BstF5I GGATG 1 cut(s) 1308
BstFNI CGCG 4 cut(s) 68, 189, 221, 1494
BstHHI GCGC 2 cut(s) 189, 1496
BstKTI GATC 7 cut(s) 108, 143, 175, 394, 475, 566, 1228
BstMAI GTCTC 5 cut(s) 32, 266, 454, 496, 611
BstMBI GATC 7 cut(s) 105, 140, 172, 391, 472, 563, 1225
BstMCI CGRYCG 1 cut(s) 78
BstMWI GCNNNNNNNGC 3 cut(s) 74, 566, 1130
BstNI CCWGG 3 cut(s) 579, 665, 1533
BstNSI RCATGY 1 cut(s) 504
BstSCI CCNGG 3 cut(s) 577, 663, 1531
BstSFI CTRYAG 2 cut(s) 725, 1383
BstUI CGCG 4 cut(s) 68, 189, 221, 1494
BstV1I GCAGC 6 cut(s) 268, 432, 664, 1136, 1264, 1364
BstV2I GAAGAC 2 cut(s) 787, 816
BstX2I RGATCY 3 cut(s) 140, 472, 563
BstXI CCANNNNNNTGG 1 cut(s) 1006
BstYI RGATCY 3 cut(s) 140, 472, 563
BstZI CGGCCG 1 cut(s) 75
BsuI GTATCC 3 cut(s) 447, 542, 1409
BsuRI GGCC 4 cut(s) 71, 77, 663, 1031
BtgI CCRYGG 2 cut(s) 219, 1064
BtgZI GCGATG 1 cut(s) 114
BtsCI GGATG 1 cut(s) 1308
BtsI GCAGTG 2 cut(s) 708, 840
BtsIMutI CAGTG 4 cut(s) 604, 627, 708, 840
Cac8I GCNNGC 3 cut(s) 135, 261, 1294
CaiI CAGNNNCTG 2 cut(s) 566, 707
CciI TCATGA 1 cut(s) 334
CfoI GCGC 2 cut(s) 189, 1496
Cfr13I GGNCC 4 cut(s) 575, 607, 661, 1726
Cfr42I CCGCGG 1 cut(s) 222
CsiI ACCWGGT 1 cut(s) 1531
Csp6I GTAC 1 cut(s) 1061
CviAII CATG 8 cut(s) 166, 335, 501, 820, 881, 994, 1065, 1334
CviQI GTAC 1 cut(s) 1061
DpnI GATC 7 cut(s) 107, 142, 174, 393, 474, 565, 1227
DpnII GATC 7 cut(s) 105, 140, 172, 391, 472, 563, 1225
DriI GACNNNNNGTC 1 cut(s) 536
EaeI YGGCCR 2 cut(s) 75, 1029
EagI CGGCCG 1 cut(s) 75
Eam1104I CTCTTC 1 cut(s) 882
Eam1105I GACNNNNNGTC 1 cut(s) 536
EarI CTCTTC 1 cut(s) 882
EclXI CGGCCG 1 cut(s) 75
Eco130I CCWWGG 1 cut(s) 1064
Eco24I GRGCYC 2 cut(s) 181, 1260
Eco32I GATATC 2 cut(s) 468, 1215
Eco47I GGWCC 3 cut(s) 575, 607, 1726
Eco52I CGGCCG 1 cut(s) 75
Eco57I CTGAAG 1 cut(s) 810
Eco88I CYCGRG 1 cut(s) 182
EcoNI CCTNNNNNAGG 1 cut(s) 789
EcoRI GAATTC 1 cut(s) 668
EcoRII CCWGG 3 cut(s) 577, 663, 1531
EcoRV GATATC 2 cut(s) 468, 1215
EcoT14I CCWWGG 1 cut(s) 1064
EcoT38I GRGCYC 2 cut(s) 181, 1260
ErhI CCWWGG 1 cut(s) 1064
FaeI CATG 8 cut(s) 169, 338, 504, 823, 884, 997, 1068, 1337
FalI AAGNNNNNCTT 4 cut(s) 1078, 1110, 1480, 1512
FatI CATG 8 cut(s) 165, 334, 500, 819, 880, 993, 1064, 1333
FokI GGATG 1 cut(s) 1315
FriOI GRGCYC 2 cut(s) 181, 1260
FspBI CTAG 5 cut(s) 269, 282, 557, 1293, 1556
GlaI GCGC 2 cut(s) 188, 1495
GsaI CCCAGC 1 cut(s) 1172
GsuI CTGGAG 3 cut(s) 116, 371, 600
HaeIII GGCC 4 cut(s) 71, 77, 663, 1031
HapII CCGG 1 cut(s) 228
HhaI GCGC 2 cut(s) 189, 1496
Hin1II CATG 8 cut(s) 169, 338, 504, 823, 884, 997, 1068, 1337
Hin6I GCGC 2 cut(s) 187, 1494
HinP1I GCGC 2 cut(s) 187, 1494
HincII GTYRAC 1 cut(s) 1235
HindII GTYRAC 1 cut(s) 1235
HindIII AAGCTT 2 cut(s) 683, 1076
HinfI GANTC 9 cut(s) 12, 56, 80, 116, 224, 265, 1330, 1606, 1733
HpaII CCGG 1 cut(s) 228
HphI GGTGA 1 cut(s) 1521
Hpy166II GTNNAC 5 cut(s) 454, 722, 1061, 1235, 1538
Hpy188I TCNGA 8 cut(s) 11, 121, 396, 472, 790, 1101, 1466, 1699
Hpy188III TCNNGA 7 cut(s) 182, 269, 335, 350, 850, 1181, 1600
Hpy8I GTNNAC 5 cut(s) 454, 722, 1061, 1235, 1538
HpyAV CCTTC 5 cut(s) 391, 526, 785, 795, 1445
HpyCH4III ACNGT 7 cut(s) 277, 622, 895, 920, 1384, 1399, 1542
HpyCH4IV ACGT 1 cut(s) 1051
HpyCH4V TGCA 6 cut(s) 448, 497, 656, 727, 809, 913
HpyF10VI GCNNNNNNNGC 3 cut(s) 74, 566, 1130
HpySE526I ACGT 1 cut(s) 1051
Hsp92II CATG 8 cut(s) 169, 338, 504, 823, 884, 997, 1068, 1337
HspAI GCGC 2 cut(s) 187, 1494
KspI CCGCGG 1 cut(s) 222
Kzo9I GATC 7 cut(s) 105, 140, 172, 391, 472, 563, 1225
LguI GCTCTTC 1 cut(s) 882
LmnI GCTCC 2 cut(s) 12, 365
Lsp1109I GCAGC 6 cut(s) 268, 432, 664, 1136, 1264, 1364
MabI ACCWGGT 1 cut(s) 1531
MaeI CTAG 5 cut(s) 269, 282, 557, 1293, 1556
MaeII ACGT 1 cut(s) 1051
MaeIII GTNAC 6 cut(s) 37, 146, 889, 1357, 1548, 1579
MalI GATC 7 cut(s) 107, 142, 174, 393, 474, 565, 1227
MboI GATC 7 cut(s) 105, 140, 172, 391, 472, 563, 1225
MboII GAAGA 8 cut(s) 383, 638, 792, 816, 869, 968, 1086, 1496
MfeI CAATTG 1 cut(s) 1118
MflI RGATCY 3 cut(s) 140, 472, 563
MhlI GDGCHC 2 cut(s) 181, 1260
MlsI TGGCCA 1 cut(s) 1031
MluCI AATT 5 cut(s) 329, 668, 845, 1118, 1469
MluNI TGGCCA 1 cut(s) 1031
MlyI GAGTC 5 cut(s) 6, 89, 125, 218, 259
MmeI TCCRAC 3 cut(s) 34, 99, 1423
MnlI CCTC 9 cut(s) 57, 82, 91, 94, 307, 575, 710, 775, 1510
Mox20I TGGCCA 1 cut(s) 1031
MroXI GAANNNNTTC 1 cut(s) 784
MscI TGGCCA 1 cut(s) 1031
MseI TTAA 6 cut(s) 249, 288, 870, 1074, 1175, 1307
MslI CAYNNNNRTG 1 cut(s) 1301
Msp20I TGGCCA 1 cut(s) 1031
MspA1I CMGCKG 4 cut(s) 221, 677, 1127, 1355
MspCI CTTAAG 1 cut(s) 1073
MspI CCGG 1 cut(s) 228
MspR9I CCNGG 3 cut(s) 579, 665, 1533
MunI CAATTG 1 cut(s) 1118
Mva1269I GAATGC 1 cut(s) 1133
MvaI CCWGG 3 cut(s) 579, 665, 1533
MvnI CGCG 4 cut(s) 68, 189, 221, 1494
MwoI GCNNNNNNNGC 3 cut(s) 74, 566, 1130
NcoI CCATGG 1 cut(s) 1064
NdeII GATC 7 cut(s) 105, 140, 172, 391, 472, 563, 1225
NheI GCTAGC 1 cut(s) 1292
NlaIII CATG 8 cut(s) 169, 338, 504, 823, 884, 997, 1068, 1337
NlaIV GGNNCC 3 cut(s) 8, 1070, 1192
NmeAIII GCCGAG 3 cut(s) 53, 103, 139
NmuCI GTSAC 3 cut(s) 37, 889, 1579
NspI RCATGY 1 cut(s) 504
PaeR7I CTCGAG 1 cut(s) 182
PagI TCATGA 1 cut(s) 334
PciI ACATGT 1 cut(s) 500
PciSI GCTCTTC 1 cut(s) 882
PcsI WCGNNNNNNNCGW 2 cut(s) 80, 694
PctI GAATGC 1 cut(s) 1133
PdmI GAANNNNTTC 1 cut(s) 784
PfeI GAWTC 4 cut(s) 56, 1330, 1606, 1733
PflMI CCANNNNNTGG 1 cut(s) 956
PleI GAGTC 5 cut(s) 6, 88, 124, 218, 259
PpsI GAGTC 5 cut(s) 6, 88, 124, 218, 259
PscI ACATGT 1 cut(s) 500
PshBI ATTAAT 1 cut(s) 870
PsiI TTATAA 1 cut(s) 908
Psp6I CCWGG 3 cut(s) 577, 663, 1531
PspFI CCCAGC 1 cut(s) 1168
PspGI CCWGG 3 cut(s) 577, 663, 1531
PspN4I GGNNCC 3 cut(s) 8, 1070, 1192
PspPI GGNCC 4 cut(s) 575, 607, 661, 1726
PstI CTGCAG 1 cut(s) 729
PstNI CAGNNNCTG 2 cut(s) 566, 707
PsuI RGATCY 3 cut(s) 140, 472, 563
PvuII CAGCTG 3 cut(s) 677, 1127, 1355
RsaI GTAC 1 cut(s) 1062
RsaNI GTAC 1 cut(s) 1061
RseI CAYNNNNRTG 1 cut(s) 1301
SacII CCGCGG 1 cut(s) 222
SapI GCTCTTC 1 cut(s) 882
SaqAI TTAA 6 cut(s) 249, 288, 870, 1074, 1175, 1307
Sau3AI GATC 7 cut(s) 105, 140, 172, 391, 472, 563, 1225
Sau96I GGNCC 4 cut(s) 575, 607, 661, 1726
SchI GAGTC 5 cut(s) 6, 89, 125, 218, 259
ScrFI CCNGG 3 cut(s) 579, 665, 1533
SduI GDGCHC 2 cut(s) 181, 1260
SexAI ACCWGGT 1 cut(s) 1531
SfcI CTRYAG 2 cut(s) 725, 1383
Sfr274I CTCGAG 1 cut(s) 182
Sfr303I CCGCGG 1 cut(s) 222
SgrBI CCGCGG 1 cut(s) 222
SinI GGWCC 3 cut(s) 575, 607, 1726
SlaI CTCGAG 1 cut(s) 182
SmiMI CAYNNNNRTG 1 cut(s) 1301
SmlI CTYRAG 5 cut(s) 182, 425, 457, 586, 1073
SmoI CTYRAG 5 cut(s) 182, 425, 457, 586, 1073
Sse9I AATT 5 cut(s) 329, 668, 845, 1118, 1469
SsiI CCGC 6 cut(s) 68, 219, 221, 1199, 1492, 1639
SspI AATATT 1 cut(s) 1044
SspMI CTAG 5 cut(s) 269, 282, 557, 1293, 1556
StyD4I CCNGG 3 cut(s) 577, 663, 1531
StyI CCWWGG 1 cut(s) 1064
TaaI ACNGT 7 cut(s) 277, 622, 895, 920, 1384, 1399, 1542
TaiI ACGT 1 cut(s) 1054
TaqI TCGA 5 cut(s) 54, 83, 183, 697, 827
TasI AATT 5 cut(s) 329, 668, 845, 1118, 1469
TauI GCSGC 4 cut(s) 71, 221, 1202, 1494
TfiI GAWTC 4 cut(s) 56, 1330, 1606, 1733
Tru1I TTAA 6 cut(s) 249, 288, 870, 1074, 1175, 1307
Tru9I TTAA 6 cut(s) 249, 288, 870, 1074, 1175, 1307
TscAI CASTG 4 cut(s) 604, 627, 708, 840
TseFI GTSAC 3 cut(s) 37, 889, 1579
TseI GCWGC 6 cut(s) 256, 445, 677, 1124, 1277, 1352
Tsp45I GTSAC 3 cut(s) 37, 889, 1579
TspDTI ATGAA 6 cut(s) 323, 869, 1122, 1307, 1496, 1610
TspRI CASTG 4 cut(s) 604, 627, 708, 840
Van91I CCANNNNNTGG 1 cut(s) 956
Vha464I CTTAAG 1 cut(s) 1073
VpaK11BI GGWCC 3 cut(s) 575, 607, 1726
VspI ATTAAT 1 cut(s) 870
XagI CCTNNNNNAGG 1 cut(s) 789
XapI RAATTY 3 cut(s) 668, 845, 1469
XbaI TCTAGA 1 cut(s) 268
XceI RCATGY 1 cut(s) 504
XcmI CCANNNNNNNNNTGG 1 cut(s) 1006
XhoI CTCGAG 1 cut(s) 182
XmnI GAANNNNTTC 1 cut(s) 784
XspI CTAG 5 cut(s) 269, 282, 557, 1293, 1556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.