Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004672

Physical Location & Seq

Genomic Coordinates Reverse (-)

90268645 .. 90277183

Gene Structure 8539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00153470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGATCGGGGGAGGAGGAGATCACCCGTGGTGGGAACGATCGGCCCATGCAACGTTTCCGGCCGGTCCGATCGCTTGGAGCCGGGCTCCTTCGATCCGTGTCCGTGGGCGGCGGCGGGGCAAGGCGACACTCGAGGGAGGCTCGGCGTGGGGCGGCGATCCCGGGGAGCCCGGTCGGGGGGAGGTGGCGGAGGGGGGTGAAAAAGCCGGTCGGGTCGAGCTCGACCCGCCGAACCAGAAGAAGAGTGAAGAGCCGAGACCACCGCCGATGGCCGACGAAGCTATCATGGACCTTCCCTTAGCGGAACGCGCCCCCATTCCCTCCGGCGATCACTCCGTCTGGGCCGACGTGTCGCCGCTCCTCGACGCCGCGTGTAAAGATCTTCAAGATGGTATGCTCATTCATGGAGATAATTTCAATCTTTTTGCTGCCATGTCTGCTTTAGAGATAATGGACCCAAAGATGGATTCTGGTATCGTTTGTAAATACTACTCTGTTGATGAAGCAATTGAGGATGGTGCTGCTCCAGTTCCTATTAGCTCTGATAGAACGGTGGATGTTCAGTGCACTATTGATATTATGGACCATCTTCTAGCATGTGAGGCGACATGGCACAAGGGTCATTCATTGGCTCAAACTGTCTTCTCTTGCATCTATCTTCTCCGGCCTGATAGGACATCCTCACATGCATTACTGCATTCTTATTGCAAAGTCGTACGAGCAACCTGCAAGACAGTCATTTCAGTTGTCTCAGATGCACGCACTCATGAAGAAGAAGACCTCTTTACAATGTCATATGGTCTGGCTTTGCATGGGGATGGAGATGATAAGTGCTTGTCAATGCTAAATGCTGTTGAAGAAACAGTTAATCGCCAATTACGTGCTTGTAAAGCCCCATCGTCAAAAAGAAGAGTGTTAGAAGACTTTGTGCCACTGCAAAATAATCTTGAATTGGAGGAAGCCTACTGCAAAGCTTTGTTATGCCGCTTACGTTTTCGTAAGCATTTTTATCATGTTCTTACTTGCATGAGACGTCCTCAAGGGAGAGGTTTGGAGTTGGCAAGAAAGCATATAGCCTCCTGCATATCAGAATTACAATGCATCCTTAACTCATCGGAGTTCCTTAGATCTAGGTCTCCTGGAACTCATGAAGGAAGTATAGAAGATAAAACTACTGCTTCTGGCTGTCAAGCAATTGGATTTGATGCTAGTTTAAACTGTAGGTTATCTGCTCCAACACCACCACGCGCAATAAAAATTCTTAGTTGGAAAAAGGCTATTGAATATTTTATGAAACTTCTTCACGATCTGGATGTCATATGTTCTTACCCATTGGACCCATCTTTAGAAAGTGTTCTGCACTTTGTGGTTGAATTCCAAAAATCTATGCCTGATTTAGTAGCAAGAGCTCATCTTCAGCGTCTGCTTGTTGAAGATGGTAAACTCTATGGCCGGGATCCTCTCTTTGGTGTTATTACCAGAGCTGCAGCTGTACCTGATTCTATAAGGAACCATGATATGCAGAAACATGAATCAATTGTTCACCTGGGACAGTTGGTAATCAACTTGCTAAAAATTTTATGTACGAATAGTGCATGGCAAAGGCGTAAGCTTGGAAAGATTTTACAAGATTGGCGTGTTGTTTGCATACAGCTAGAGATGGCCTTTAGAAAGGACTCGGGGAAAACACAGATTCTTCAAATGATGAGGGCTCTACACAGATGTTATACAGAGCTTATGACACCATCTGATGCACTATGCACTTCTGTTGATCAGATGCTTGCTGCTTTGAGGAATGAACATATGATGGTACAAAGTCCAAGCCCTTTTAATACTGAGCATGAGAGATTTAGTCAGCACTTTGAGCTTCTACAAAAGGCTTGCATTCCTGATCAAGTCTCGTACCCCTTGTTTAAGGATTCTACTACTCATGCTCGTTTATTGAACCTAGTTAGGTATGATCACTTTAAAGATGCTCAGAAGATTGTGAAGGAGGTAAAAAGTAGTTTTTCCAATAACCCAGAAAAATCTGCCGAACTACGAAGGCTAGAGCAAGTAGCCGAGCACAATAGCATTGCCTTAAACATAATCTCCCGAGCCGGAGCCCTTGACCCCTCACTGAAGGTATCATTCGAGTTCAACCACCATCCTTATTTCGCAACAGCTGTTGTTAAGAGATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mak10

Protein Analysis

727

Amino Acids

81.32

Weight (kDa)

6.87

Isoelectric Point (pI)

50.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mak10	PF04112	131 - 270	5.1e-27	Mak10 subunit, NatC N(alpha)-terminal acetyltransferase
TPR_NAA35	PF25789	440 - 562	9.7e-41	NAA35-like, TPR repeats
TPR_NAA35	PF25789	584 - 722	1.6e-47	NAA35-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G11000 AT2G11000 AT2G11000 AT2G11000
fragaria_vesca	FvH4_1g02530 FvH4_1g02530 FvH4_1g02530 FvH4_1g02530 FvH4_1g02530
malus_domestica	MD02G1022800.v1.1 MD15G1165500.v1.1
prunus_persica	Prupe.7G249300_v2.0.a1 Prupe.7G249300_v2.0.a1 Prupe.7G249300_v2.0.a1 Prupe.7G249300_v2.0.a1 Prupe.7G249300_v2.0.a1 Prupe.7G249300_v2.0.a1 Prupe.7G249300_v2.0.a1
pyrus_communis	pycom02g01970 pycom15g14820
rosa_chinensis	RchiOBHm_Chr2g0087561
rosa_laevigata	RLG00000015878
rosa_multiflora	Rmu_sc0002299.1_g000022
rosa_roxburghii	Rroxscaffold_2G00153470
rosa_rugosa	Rorug01G0476400 Rorug01G0476500
rosa_samantha	Rh2AG029900 Rh2BG029900 Rh2CG030100 Rh2DG030100
rosa_wichuraiana	Rw2G002380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1036
Acc36I	ACCTGC	1 cut(s)	734
AccBSI	CCGCTC	1 cut(s)	358
AccII	CGCG	3 cut(s)	309, 371, 1248
AclI	AACGTT	1 cut(s)	53
AclWI	GGATC	4 cut(s)	88, 152, 1451, 1464
AcoI	YGGCCR	3 cut(s)	60, 270, 1450
AcsI	RAATTY	3 cut(s)	1257, 1373, 1575
AcuI	CTGAAG	2 cut(s)	1400, 2141
AcyI	GRCGYC	2 cut(s)	366, 1033
AdeI	CACNNNGTG	1 cut(s)	1366
AfaI	GTAC	5 cut(s)	717, 1494, 1585, 1812, 1904
AfiI	CCNNNNNNNGG	5 cut(s)	31, 176, 177, 463, 1466
AflIII	ACRYGT	1 cut(s)	348
AjiI	CACGTC	1 cut(s)	349
AjnI	CCWGG	2 cut(s)	1138, 1545
AjuI	GAANNNNNNNTTGG	2 cut(s)	451, 483
Alw21I	GWGCWC	4 cut(s)	222, 569, 1411, 2067
Alw26I	GTCTC	5 cut(s)	250, 754, 1024, 1140, 1903
Alw44I	GTGCAC	1 cut(s)	565
AlwI	GGATC	4 cut(s)	88, 152, 1451, 1464
AlwNI	CAGNNNCTG	1 cut(s)	1423
Ama87I	CYCGRG	4 cut(s)	131, 161, 1678, 2094
AoxI	GGCC	7 cut(s)	42, 60, 270, 342, 665, 1450, 1662
ApaLI	GTGCAC	1 cut(s)	565
ApeKI	GCWGC	5 cut(s)	428, 521, 1484, 1487, 1784
ApoI	RAATTY	3 cut(s)	1257, 1373, 1575
Asp700I	GAANNNNTTC	1 cut(s)	1353
AspLEI	GCGC	2 cut(s)	311, 1250
AspS9I	GGNCC	7 cut(s)	43, 65, 289, 342, 454, 583, 1336
AsuC2I	CCSGG	5 cut(s)	83, 162, 163, 171, 1454
AsuHPI	GGTGA	3 cut(s)	14, 209, 1535
AvaI	CYCGRG	4 cut(s)	131, 161, 1678, 2094
AvaII	GGWCC	5 cut(s)	65, 289, 454, 583, 1336
BaeGI	GKGCMC	1 cut(s)	569
BamHI	GGATCC	1 cut(s)	1456
BanII	GRGCYC	6 cut(s)	88, 171, 222, 1411, 1714, 2107
BbsI	GAAGAC	3 cut(s)	634, 783, 927
Bbv12I	GWGCWC	4 cut(s)	222, 569, 1411, 2067
BbvI	GCAGC	5 cut(s)	415, 508, 1471, 1499, 1771
BcgI	CGANNNNNNTGC	2 cut(s)	708, 742
BciT130I	CCWGG	2 cut(s)	1140, 1547
BclI	TGATCA	3 cut(s)	1771, 1891, 1960
BcnI	CCSGG	5 cut(s)	83, 162, 163, 171, 1454
BcoDI	GTCTC	5 cut(s)	250, 754, 1024, 1140, 1903
BfaI	CTAG	6 cut(s)	593, 1131, 1209, 1655, 1949, 2048
BfmI	CTRYAG	2 cut(s)	1219, 1485
BfuAI	ACCTGC	1 cut(s)	734
BglII	AGATCT	3 cut(s)	379, 1127, 2177
Bme1390I	CCNGG	7 cut(s)	83, 162, 163, 171, 1140, 1454, 1547
Bme18I	GGWCC	5 cut(s)	65, 289, 454, 583, 1336
BmeT110I	CYCGRG	4 cut(s)	131, 161, 1678, 2094
BmgBI	CACGTC	1 cut(s)	349
BmgT120I	GGNCC	7 cut(s)	43, 65, 289, 342, 454, 583, 1336
BmiI	GGNNCC	8 cut(s)	80, 87, 168, 456, 1338, 1458, 1511, 2104
BmrFI	CCNGG	7 cut(s)	83, 162, 163, 171, 1140, 1454, 1547
BmsI	GCATC	7 cut(s)	660, 745, 1110, 1195, 1741, 1767, 1963
BpiI	GAAGAC	3 cut(s)	634, 783, 927
BplI	GAGNNNNNCTC	6 cut(s)	70, 102, 125, 157, 1021, 1053
BpmI	CTGGAG	1 cut(s)	510
Bpu10I	CCTNAGC	1 cut(s)	298
BpuEI	CTTGAG	1 cut(s)	1023
BpuMI	CCSGG	5 cut(s)	83, 162, 163, 171, 1454
BsaAI	YACGTR	1 cut(s)	881
BsaHI	GRCGYC	2 cut(s)	366, 1033
BsaI	GGTCTC	2 cut(s)	250, 1140
BsaJI	CCNNGG	5 cut(s)	26, 103, 161, 162, 1546
BsaXI	ACNNNNNCTCC	2 cut(s)	2075, 2105
Bsc4I	CCNNNNNNNGG	5 cut(s)	31, 176, 177, 463, 1466
Bse118I	RCCGGY	2 cut(s)	62, 206
Bse1I	ACTGG	1 cut(s)	527
Bse3DI	GCAATG	1 cut(s)	2073
BseBI	CCWGG	2 cut(s)	1140, 1547
BseDI	CCNNGG	5 cut(s)	26, 103, 161, 162, 1546
BseGI	GGATG	7 cut(s)	520, 562, 677, 823, 1101, 1318, 2146
BseLI	CCNNNNNNNGG	5 cut(s)	31, 176, 177, 463, 1466
BseMI	GCAATG	1 cut(s)	2073
BseMII	CTCAG	3 cut(s)	765, 1827, 1991
BseNI	ACTGG	1 cut(s)	527
BseRI	GAGGAG	3 cut(s)	27, 30, 350
BseSI	GKGCMC	1 cut(s)	569
BseX3I	CGGCCG	1 cut(s)	60
BseXI	GCAGC	5 cut(s)	415, 508, 1471, 1499, 1771
BsgI	GTGCAG	1 cut(s)	1343
Bsh1236I	CGCG	3 cut(s)	309, 371, 1248
Bsh1285I	CGRYCG	5 cut(s)	41, 63, 72, 175, 211
BshFI	GGCC	7 cut(s)	44, 62, 272, 344, 667, 1452, 1664
BsiEI	CGRYCG	5 cut(s)	41, 63, 72, 175, 211
BsiHKAI	GWGCWC	4 cut(s)	222, 569, 1411, 2067
BsiHKCI	CYCGRG	4 cut(s)	131, 161, 1678, 2094
BsiWI	CGTACG	1 cut(s)	715
BslFI	GGGAC	1 cut(s)	1563
BslI	CCNNNNNNNGG	5 cut(s)	31, 176, 177, 463, 1466
BsmAI	GTCTC	5 cut(s)	250, 754, 1024, 1140, 1903
BsmBI	CGTCTC	1 cut(s)	1024
BsmFI	GGGAC	1 cut(s)	1563
BsmI	GAATGC	2 cut(s)	697, 1884
BsnI	GGCC	7 cut(s)	44, 62, 272, 344, 667, 1452, 1664
Bso31I	GGTCTC	2 cut(s)	250, 1140
BsoBI	CYCGRG	4 cut(s)	131, 161, 1678, 2094
Bsp1286I	GDGCHC	8 cut(s)	88, 171, 222, 569, 1411, 1714, 2067, 2107
BspANI	GGCC	7 cut(s)	44, 62, 272, 344, 667, 1452, 1664
BspCNI	CTCAG	3 cut(s)	764, 1828, 1990
BspFNI	CGCG	3 cut(s)	309, 371, 1248
BspHI	TCATGA	2 cut(s)	766, 1147
BspLI	GGNNCC	8 cut(s)	80, 87, 168, 456, 1338, 1458, 1511, 2104
BspMAI	CTGCAG	1 cut(s)	1489
BspMI	ACCTGC	1 cut(s)	734
BspPI	GGATC	4 cut(s)	88, 152, 1451, 1464
BspQI	GCTCTTC	1 cut(s)	243
BspTNI	GGTCTC	2 cut(s)	250, 1140
BsrBI	CCGCTC	1 cut(s)	358
BsrDI	GCAATG	1 cut(s)	2073
BsrFI	RCCGGY	2 cut(s)	62, 206
BsrI	ACTGG	1 cut(s)	527
BssAI	RCCGGY	2 cut(s)	62, 206
BssECI	CCNNGG	5 cut(s)	26, 103, 161, 162, 1546
BssNI	GRCGYC	2 cut(s)	366, 1033
Bst2UI	CCWGG	2 cut(s)	1140, 1547
Bst4CI	ACNGT	6 cut(s)	553, 640, 736, 865, 1220, 1554
Bst6I	CTCTTC	3 cut(s)	236, 243, 904
BstACI	GRCGYC	2 cut(s)	366, 1033
BstBAI	YACGTR	1 cut(s)	881
BstC8I	GCNNGC	3 cut(s)	760, 1782, 1882
BstDEI	CTNAG	6 cut(s)	298, 751, 1124, 1262, 1836, 1977
BstDSI	CCRYGG	2 cut(s)	26, 103
BstF5I	GGATG	7 cut(s)	520, 562, 677, 823, 1101, 1318, 2146
BstFNI	CGCG	3 cut(s)	309, 371, 1248
BstHHI	GCGC	2 cut(s)	311, 1250
BstMAI	GTCTC	5 cut(s)	250, 754, 1024, 1140, 1903
BstMCI	CGRYCG	5 cut(s)	41, 63, 72, 175, 211
BstMWI	GCNNNNNNNGC	7 cut(s)	226, 278, 308, 437, 602, 890, 1864
BstNI	CCWGG	2 cut(s)	1140, 1547
BstNSI	RCATGY	2 cut(s)	600, 689
BstSCI	CCNGG	7 cut(s)	81, 160, 161, 169, 1138, 1452, 1545
BstSFI	CTRYAG	2 cut(s)	1219, 1485
BstSLI	GKGCMC	1 cut(s)	569
BstUI	CGCG	3 cut(s)	309, 371, 1248
BstV1I	GCAGC	5 cut(s)	415, 508, 1471, 1499, 1771
BstV2I	GAAGAC	3 cut(s)	634, 783, 927
BstX2I	RGATCY	4 cut(s)	379, 1127, 1456, 2177
BstYI	RGATCY	4 cut(s)	379, 1127, 1456, 2177
BstZI	CGGCCG	1 cut(s)	60
BsuRI	GGCC	7 cut(s)	44, 62, 272, 344, 667, 1452, 1664
BtgI	CCRYGG	2 cut(s)	26, 103
BtrI	CACGTC	1 cut(s)	349
BtsCI	GGATG	7 cut(s)	520, 562, 677, 823, 1101, 1318, 2146
BtsI	GCAGTG	1 cut(s)	932
BtsIMutI	CAGTG	3 cut(s)	569, 932, 2117
BveI	ACCTGC	1 cut(s)	734
Cac8I	GCNNGC	3 cut(s)	760, 1782, 1882
CaiI	CAGNNNCTG	1 cut(s)	1423
CciI	TCATGA	2 cut(s)	766, 1147
CfoI	GCGC	2 cut(s)	311, 1250
Cfr10I	RCCGGY	2 cut(s)	62, 206
Cfr13I	GGNCC	7 cut(s)	43, 65, 289, 342, 454, 583, 1336
Cfr9I	CCCGGG	1 cut(s)	161
CpoI	CGGWCCG	1 cut(s)	65
CseI	GACGC	2 cut(s)	374, 1409
Csp6I	GTAC	5 cut(s)	716, 1493, 1584, 1811, 1903
CspI	CGGWCCG	1 cut(s)	65
CviQI	GTAC	5 cut(s)	716, 1493, 1584, 1811, 1903
DdeI	CTNAG	6 cut(s)	298, 751, 1124, 1262, 1836, 1977
DraI	TTTAAA	2 cut(s)	1215, 1969
DraIII	CACNNNGTG	1 cut(s)	1366
EaeI	YGGCCR	3 cut(s)	60, 270, 1450
EagI	CGGCCG	1 cut(s)	60
Eam1104I	CTCTTC	3 cut(s)	236, 243, 904
EarI	CTCTTC	3 cut(s)	236, 243, 904
EciI	GGCGGA	1 cut(s)	203
Ecl136II	GAGCTC	2 cut(s)	220, 1409
EclXI	CGGCCG	1 cut(s)	60
Eco24I	GRGCYC	6 cut(s)	88, 171, 222, 1411, 1714, 2107
Eco31I	GGTCTC	2 cut(s)	250, 1140
Eco47I	GGWCC	5 cut(s)	65, 289, 454, 583, 1336
Eco52I	CGGCCG	1 cut(s)	60
Eco53kI	GAGCTC	2 cut(s)	220, 1409
Eco57I	CTGAAG	2 cut(s)	1400, 2141
Eco88I	CYCGRG	4 cut(s)	131, 161, 1678, 2094
EcoICRI	GAGCTC	2 cut(s)	220, 1409
EcoRI	GAATTC	1 cut(s)	1373
EcoRII	CCWGG	2 cut(s)	1138, 1545
EcoT22I	ATGCAT	2 cut(s)	691, 1103
EcoT38I	GRGCYC	6 cut(s)	88, 171, 222, 1411, 1714, 2107
Esp3I	CGTCTC	1 cut(s)	1024
FaqI	GGGAC	1 cut(s)	1563
FauI	CCCGC	2 cut(s)	108, 234
FauNDI	CATATG	3 cut(s)	796, 1319, 1803
FbaI	TGATCA	3 cut(s)	1771, 1891, 1960
FokI	GGATG	7 cut(s)	527, 569, 664, 830, 1088, 1325, 2133
FriOI	GRGCYC	6 cut(s)	88, 171, 222, 1411, 1714, 2107
FspBI	CTAG	6 cut(s)	593, 1131, 1209, 1655, 1949, 2048
GlaI	GCGC	2 cut(s)	310, 1249
GsuI	CTGGAG	1 cut(s)	510
HaeIII	GGCC	7 cut(s)	44, 62, 272, 344, 667, 1452, 1664
HgaI	GACGC	2 cut(s)	374, 1409
HhaI	GCGC	2 cut(s)	311, 1250
Hin1I	GRCGYC	2 cut(s)	366, 1033
Hin6I	GCGC	2 cut(s)	309, 1248
HinP1I	GCGC	2 cut(s)	309, 1248
HindIII	AAGCTT	2 cut(s)	972, 1610
HinfI	GANTC	6 cut(s)	467, 1499, 1532, 1676, 1693, 1919
HphI	GGTGA	3 cut(s)	14, 209, 1535
Hpy166II	GTNNAC	3 cut(s)	567, 1442, 1543
Hpy188I	TCNGA	8 cut(s)	69, 544, 754, 1090, 1117, 1750, 1776, 1980
Hpy188III	TCNNGA	9 cut(s)	386, 767, 947, 1148, 1304, 1310, 1889, 2094, 2181
Hpy8I	GTNNAC	3 cut(s)	567, 1442, 1543
Hpy99I	CGWCG	3 cut(s)	278, 350, 368
HpyAV	CCTTC	6 cut(s)	99, 302, 1145, 1984, 2037, 2116
HpyCH4III	ACNGT	6 cut(s)	553, 640, 736, 865, 1220, 1554
HpyCH4IV	ACGT	5 cut(s)	53, 348, 880, 991, 1033
HpyF10VI	GCNNNNNNNGC	7 cut(s)	226, 278, 308, 437, 602, 890, 1864
HpyF3I	CTNAG	6 cut(s)	298, 751, 1124, 1262, 1836, 1977
HpySE526I	ACGT	5 cut(s)	53, 348, 880, 991, 1033
Hsp92I	GRCGYC	2 cut(s)	366, 1033
HspAI	GCGC	2 cut(s)	309, 1248
Ksp22I	TGATCA	3 cut(s)	1771, 1891, 1960
LguI	GCTCTTC	1 cut(s)	243
LmnI	GCTCC	7 cut(s)	78, 91, 166, 363, 529, 1237, 2102
Lsp1109I	GCAGC	5 cut(s)	415, 508, 1471, 1499, 1771
LweI	GCATC	7 cut(s)	660, 745, 1110, 1195, 1741, 1767, 1963
MaeI	CTAG	6 cut(s)	593, 1131, 1209, 1655, 1949, 2048
MaeII	ACGT	5 cut(s)	53, 348, 880, 991, 1033
MbiI	CCGCTC	1 cut(s)	358
MfeI	CAATTG	3 cut(s)	507, 1194, 1536
MflI	RGATCY	4 cut(s)	379, 1127, 1456, 2177
MhlI	GDGCHC	8 cut(s)	88, 171, 222, 569, 1411, 1714, 2067, 2107
MlyI	GAGTC	1 cut(s)	1670
MmeI	TCCRAC	2 cut(s)	1247, 1259
Mph1103I	ATGCAT	2 cut(s)	691, 1103
MroXI	GAANNNNTTC	1 cut(s)	1353
MseI	TTAA	8 cut(s)	867, 1107, 1214, 1830, 1914, 1968, 2081, 2172
MslI	CAYNNNNRTG	1 cut(s)	816
MspA1I	CMGCKG	2 cut(s)	1490, 2165
MspR9I	CCNGG	7 cut(s)	83, 162, 163, 171, 1140, 1454, 1547
MssI	GTTTAAAC	1 cut(s)	1215
MunI	CAATTG	3 cut(s)	507, 1194, 1536
Mva1269I	GAATGC	2 cut(s)	697, 1884
MvaI	CCWGG	2 cut(s)	1140, 1547
MvnI	CGCG	3 cut(s)	309, 371, 1248
MwoI	GCNNNNNNNGC	7 cut(s)	226, 278, 308, 437, 602, 890, 1864
NciI	CCSGG	5 cut(s)	83, 162, 163, 171, 1454
NdeI	CATATG	3 cut(s)	796, 1319, 1803
NlaIV	GGNNCC	8 cut(s)	80, 87, 168, 456, 1338, 1458, 1511, 2104
NmeAIII	GCCGAG	3 cut(s)	122, 279, 2086
NsiI	ATGCAT	2 cut(s)	691, 1103
NspI	RCATGY	2 cut(s)	600, 689
PaeR7I	CTCGAG	1 cut(s)	131
PagI	TCATGA	2 cut(s)	766, 1147
PciSI	GCTCTTC	1 cut(s)	243
PcsI	WCGNNNNNNNCGW	1 cut(s)	877
PctI	GAATGC	2 cut(s)	697, 1884
PdmI	GAANNNNTTC	1 cut(s)	1353
PfeI	GAWTC	5 cut(s)	467, 1499, 1532, 1693, 1919
Pfl23II	CGTACG	1 cut(s)	715
PfoI	TCCNGGA	1 cut(s)	1138
Ple19I	CGATCG	2 cut(s)	41, 72
PleI	GAGTC	1 cut(s)	1670
PmeI	GTTTAAAC	1 cut(s)	1215
PpsI	GAGTC	1 cut(s)	1670
Ppu21I	YACGTR	1 cut(s)	881
Psp124BI	GAGCTC	2 cut(s)	222, 1411
Psp1406I	AACGTT	1 cut(s)	53
Psp6I	CCWGG	2 cut(s)	1138, 1545
PspGI	CCWGG	2 cut(s)	1138, 1545
PspLI	CGTACG	1 cut(s)	715
PspN4I	GGNNCC	8 cut(s)	80, 87, 168, 456, 1338, 1458, 1511, 2104
PspPI	GGNCC	7 cut(s)	43, 65, 289, 342, 454, 583, 1336
PspXI	VCTCGAGB	1 cut(s)	131
PstI	CTGCAG	1 cut(s)	1489
PstNI	CAGNNNCTG	1 cut(s)	1423
PsuI	RGATCY	4 cut(s)	379, 1127, 1456, 2177
PvuI	CGATCG	2 cut(s)	41, 72
PvuII	CAGCTG	2 cut(s)	1490, 2165
RsaI	GTAC	5 cut(s)	717, 1494, 1585, 1812, 1904
RsaNI	GTAC	5 cut(s)	716, 1493, 1584, 1811, 1903
RseI	CAYNNNNRTG	1 cut(s)	816
Rsr2I	CGGWCCG	1 cut(s)	65
RsrII	CGGWCCG	1 cut(s)	65
SacI	GAGCTC	2 cut(s)	222, 1411
SapI	GCTCTTC	1 cut(s)	243
SaqAI	TTAA	8 cut(s)	867, 1107, 1214, 1830, 1914, 1968, 2081, 2172
Sau96I	GGNCC	7 cut(s)	43, 65, 289, 342, 454, 583, 1336
SchI	GAGTC	1 cut(s)	1670
ScrFI	CCNGG	7 cut(s)	83, 162, 163, 171, 1140, 1454, 1547
SduI	GDGCHC	8 cut(s)	88, 171, 222, 569, 1411, 1714, 2067, 2107
SfaNI	GCATC	7 cut(s)	660, 745, 1110, 1195, 1741, 1767, 1963
SfcI	CTRYAG	2 cut(s)	1219, 1485
Sfr274I	CTCGAG	1 cut(s)	131
SinI	GGWCC	5 cut(s)	65, 289, 454, 583, 1336
SlaI	CTCGAG	1 cut(s)	131
SmaI	CCCGGG	1 cut(s)	163
SmiMI	CAYNNNNRTG	1 cut(s)	816
SmlI	CTYRAG	2 cut(s)	131, 1038
SmoI	CTYRAG	2 cut(s)	131, 1038
SspI	AATATT	1 cut(s)	1286
SspMI	CTAG	6 cut(s)	593, 1131, 1209, 1655, 1949, 2048
SstI	GAGCTC	2 cut(s)	222, 1411
StyD4I	CCNGG	7 cut(s)	81, 160, 161, 169, 1138, 1452, 1545
TaaI	ACNGT	6 cut(s)	553, 640, 736, 865, 1220, 1554
TaiI	ACGT	5 cut(s)	56, 351, 883, 994, 1036
TaqI	TCGA	6 cut(s)	92, 132, 216, 222, 363, 2133
TauI	GCSGC	6 cut(s)	112, 115, 156, 358, 371, 987
TfiI	GAWTC	5 cut(s)	467, 1499, 1532, 1693, 1919
Tru1I	TTAA	8 cut(s)	867, 1107, 1214, 1830, 1914, 1968, 2081, 2172
Tru9I	TTAA	8 cut(s)	867, 1107, 1214, 1830, 1914, 1968, 2081, 2172
TscAI	CASTG	3 cut(s)	569, 939, 2124
TseI	GCWGC	5 cut(s)	428, 521, 1484, 1487, 1784
TspDTI	ATGAA	8 cut(s)	392, 516, 615, 783, 1164, 1307, 1545, 1812
TspGWI	ACGGA	3 cut(s)	86, 92, 325
TspMI	CCCGGG	1 cut(s)	161
TspRI	CASTG	3 cut(s)	569, 939, 2124
VneI	GTGCAC	1 cut(s)	565
VpaK11BI	GGWCC	5 cut(s)	65, 289, 454, 583, 1336
XapI	RAATTY	3 cut(s)	1257, 1373, 1575
XceI	RCATGY	2 cut(s)	600, 689
XhoI	CTCGAG	1 cut(s)	131
XmaI	CCCGGG	1 cut(s)	161
XmnI	GAANNNNTTC	1 cut(s)	1353
XspI	CTAG	6 cut(s)	593, 1131, 1209, 1655, 1949, 2048
ZraI	GACGTC	1 cut(s)	1034
Zsp2I	ATGCAT	2 cut(s)	691, 1103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.