Rorug01G0476500

N-alpha-acetyltransferase 35, NatC auxiliary

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
56611357 .. 56611810
454 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0476500.1

Sequence Viewer

Length: 228 bp
ATGTTCTCCTCGGATATAATCCACAAGCCAATGAGCTTCATAGAAAACGACAAGGAAAAACAGAAGGAGGCCGGTGAAATTGCTTCTTCATCATCGGCGGTGGCGGCCAATAGTGAACATGGAGAGAAGCAGCAGCAGCAGCTAGAGAGCAAGAGTATGATGCCATTGGCAAGGTTTGCGCCGGAGATCGATGGGGTTCACTGTTTCGAAACCATTGTTCTTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

8.32

Weight (kDa)

5.0

Isoelectric Point (pI)

66.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 98, 104
AcoI YGGCCR 1 cut(s) 105
AcuI CTGAAG 1 cut(s) 206
AluBI AGCT 2 cut(s) 36, 142
AluI AGCT 2 cut(s) 36, 142
AoxI GGCC 2 cut(s) 69, 105
ApeKI GCWGC 4 cut(s) 130, 133, 136, 139
AspLEI GCGC 1 cut(s) 181
AsuHPI GGTGA 1 cut(s) 86
AsuII TTCGAA 1 cut(s) 207
BbvI GCAGC 4 cut(s) 142, 145, 148, 151
BccI CCATC 1 cut(s) 185
BfaI CTAG 1 cut(s) 143
BisI GCNGC 5 cut(s) 105, 131, 134, 137, 140
BlsI GCNGC 5 cut(s) 106, 132, 135, 138, 141
BmsI GCATC 1 cut(s) 150
Bpu14I TTCGAA 1 cut(s) 207
Bsa29I ATCGAT 1 cut(s) 189
BsaJI CCNNGG 1 cut(s) 9
Bse118I RCCGGY 1 cut(s) 71
BseCI ATCGAT 1 cut(s) 189
BseDI CCNNGG 1 cut(s) 9
BseXI GCAGC 4 cut(s) 142, 145, 148, 151
BshFI GGCC 2 cut(s) 71, 107
BshVI ATCGAT 1 cut(s) 189
BsiSI CCGG 2 cut(s) 72, 182
BsnI GGCC 2 cut(s) 71, 107
Bsp119I TTCGAA 1 cut(s) 207
Bsp143I GATC 1 cut(s) 186
BspACI CCGC 2 cut(s) 98, 104
BspANI GGCC 2 cut(s) 71, 107
BspDI ATCGAT 1 cut(s) 189
BspT104I TTCGAA 1 cut(s) 207
BsrFI RCCGGY 1 cut(s) 71
BssAI RCCGGY 1 cut(s) 71
BssECI CCNNGG 1 cut(s) 9
BssMI GATC 1 cut(s) 186
Bst4CI ACNGT 1 cut(s) 203
BstAPI GCANNNNNTGC 1 cut(s) 176
BstBI TTCGAA 1 cut(s) 207
BstHHI GCGC 1 cut(s) 181
BstKTI GATC 1 cut(s) 189
BstMBI GATC 1 cut(s) 186
BstMWI GCNNNNNNNGC 4 cut(s) 104, 136, 139, 176
BstV1I GCAGC 4 cut(s) 142, 145, 148, 151
Bsu15I ATCGAT 1 cut(s) 189
BsuRI GGCC 2 cut(s) 71, 107
BsuTUI ATCGAT 1 cut(s) 189
BtsIMutI CAGTG 1 cut(s) 199
CfoI GCGC 1 cut(s) 181
Cfr10I RCCGGY 1 cut(s) 71
ClaI ATCGAT 1 cut(s) 189
CviAII CATG 1 cut(s) 119
CviJI RGCY 5 cut(s) 28, 36, 71, 107, 142
CviKI_1 RGCY 5 cut(s) 28, 36, 71, 107, 142
DpnI GATC 1 cut(s) 188
DpnII GATC 1 cut(s) 186
EaeI YGGCCR 1 cut(s) 105
Eco57I CTGAAG 1 cut(s) 206
FaeI CATG 1 cut(s) 122
FaiI YATR 4 cut(s) 17, 41, 120, 158
FatI CATG 1 cut(s) 118
Fnu4HI GCNGC 5 cut(s) 105, 131, 134, 137, 140
Fsp4HI GCNGC 5 cut(s) 105, 131, 134, 137, 140
FspBI CTAG 1 cut(s) 143
GlaI GCGC 1 cut(s) 180
GluI GCNGC 5 cut(s) 105, 131, 134, 137, 140
HaeIII GGCC 2 cut(s) 71, 107
HapII CCGG 2 cut(s) 72, 182
HhaI GCGC 1 cut(s) 181
Hin1II CATG 1 cut(s) 122
Hin6I GCGC 1 cut(s) 179
HinP1I GCGC 1 cut(s) 179
HpaII CCGG 2 cut(s) 72, 182
HphI GGTGA 1 cut(s) 86
Hpy166II GTNNAC 2 cut(s) 116, 199
Hpy188I TCNGA 1 cut(s) 13
Hpy8I GTNNAC 2 cut(s) 116, 199
HpyAV CCTTC 1 cut(s) 58
HpyCH4III ACNGT 1 cut(s) 203
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 136, 139, 176
Hsp92II CATG 1 cut(s) 122
HspAI GCGC 1 cut(s) 179
Kzo9I GATC 1 cut(s) 186
LpnPI CCDG 2 cut(s) 85, 195
Lsp1109I GCAGC 4 cut(s) 142, 145, 148, 151
LweI GCATC 1 cut(s) 150
MaeI CTAG 1 cut(s) 143
MalI GATC 1 cut(s) 188
MboI GATC 1 cut(s) 186
MboII GAAGA 2 cut(s) 78, 212
MluCI AATT 1 cut(s) 78
MnlI CCTC 2 cut(s) 19, 61
MspI CCGG 2 cut(s) 72, 182
MwoI GCNNNNNNNGC 4 cut(s) 104, 136, 139, 176
NdeII GATC 1 cut(s) 186
NlaIII CATG 1 cut(s) 122
NspV TTCGAA 1 cut(s) 207
PkrI GCNGC 5 cut(s) 106, 132, 135, 138, 141
SatI GCNGC 5 cut(s) 105, 131, 134, 137, 140
Sau3AI GATC 1 cut(s) 186
SetI ASST 3 cut(s) 38, 144, 176
SfaNI GCATC 1 cut(s) 150
SfuI TTCGAA 1 cut(s) 207
SgeI CNNG 9 cut(s) 22, 37, 64, 84, 131, 155, 163, 183, 194
Sse9I AATT 1 cut(s) 78
SsiI CCGC 2 cut(s) 98, 104
SspMI CTAG 1 cut(s) 143
TaaI ACNGT 1 cut(s) 203
TaqI TCGA 2 cut(s) 189, 207
TasI AATT 1 cut(s) 78
TauI GCSGC 1 cut(s) 107
TscAI CASTG 1 cut(s) 206
TseI GCWGC 4 cut(s) 130, 133, 136, 139
TspDTI ATGAA 2 cut(s) 28, 78
TspRI CASTG 1 cut(s) 206
XspI CTAG 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.