Cinnamoyl-CoA reductase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000857.1_g000027 Rmu_sc0006599.1_g000005 Rmu_sc0010495.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00257870 |
| rosa_samantha | Rh5AG186400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 198 |
| AcsI | RAATTY | 3 cut(s) | 78, 120, 172 |
| AcuI | CTGAAG | 1 cut(s) | 480 |
| AgsI | TTSAA | 2 cut(s) | 403, 561 |
| AjnI | CCWGG | 1 cut(s) | 376 |
| AluBI | AGCT | 5 cut(s) | 90, 147, 331, 464, 549 |
| AluI | AGCT | 5 cut(s) | 90, 147, 331, 464, 549 |
| Alw26I | GTCTC | 2 cut(s) | 366, 579 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 458 |
| AoxI | GGCC | 1 cut(s) | 194 |
| ApeKI | GCWGC | 1 cut(s) | 331 |
| ApoI | RAATTY | 3 cut(s) | 78, 120, 172 |
| AspS9I | GGNCC | 1 cut(s) | 195 |
| AsuHPI | GGTGA | 3 cut(s) | 392, 548, 604 |
| BbvI | GCAGC | 1 cut(s) | 318 |
| BccI | CCATC | 1 cut(s) | 43 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 514, 548 |
| BciT130I | CCWGG | 1 cut(s) | 378 |
| BciVI | GTATCC | 1 cut(s) | 341 |
| BcoDI | GTCTC | 2 cut(s) | 366, 579 |
| BfaI | CTAG | 2 cut(s) | 75, 369 |
| BfmI | CTRYAG | 1 cut(s) | 630 |
| BfuI | GTATCC | 1 cut(s) | 341 |
| BisI | GCNGC | 1 cut(s) | 332 |
| BlsI | GCNGC | 1 cut(s) | 333 |
| Bme1390I | CCNGG | 1 cut(s) | 378 |
| BmgT120I | GGNCC | 1 cut(s) | 195 |
| BmiI | GGNNCC | 1 cut(s) | 517 |
| BmrFI | CCNGG | 1 cut(s) | 378 |
| BmsI | GCATC | 2 cut(s) | 323, 544 |
| BsaI | GGTCTC | 1 cut(s) | 366 |
| BsaJI | CCNNGG | 1 cut(s) | 376 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 294, 324 |
| Bse1I | ACTGG | 1 cut(s) | 298 |
| BseBI | CCWGG | 1 cut(s) | 378 |
| BseDI | CCNNGG | 1 cut(s) | 376 |
| BseMII | CTCAG | 2 cut(s) | 100, 247 |
| BseNI | ACTGG | 1 cut(s) | 298 |
| BseXI | GCAGC | 1 cut(s) | 318 |
| BshFI | GGCC | 1 cut(s) | 196 |
| BsmAI | GTCTC | 2 cut(s) | 366, 579 |
| BsnI | GGCC | 1 cut(s) | 196 |
| Bso31I | GGTCTC | 1 cut(s) | 366 |
| BspACI | CCGC | 1 cut(s) | 198 |
| BspANI | GGCC | 1 cut(s) | 196 |
| BspCNI | CTCAG | 2 cut(s) | 99, 246 |
| BspLI | GGNNCC | 1 cut(s) | 517 |
| BspMAI | CTGCAG | 1 cut(s) | 634 |
| BspTNI | GGTCTC | 1 cut(s) | 366 |
| BsrI | ACTGG | 1 cut(s) | 298 |
| BssECI | CCNNGG | 1 cut(s) | 376 |
| Bst2UI | CCWGG | 1 cut(s) | 378 |
| Bst4CI | ACNGT | 1 cut(s) | 283 |
| BstC8I | GCNNGC | 1 cut(s) | 198 |
| BstDEI | CTNAG | 2 cut(s) | 86, 233 |
| BstMAI | GTCTC | 2 cut(s) | 366, 579 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 256, 522 |
| BstNI | CCWGG | 1 cut(s) | 378 |
| BstNSI | RCATGY | 2 cut(s) | 254, 592 |
| BstSCI | CCNGG | 1 cut(s) | 376 |
| BstSFI | CTRYAG | 1 cut(s) | 630 |
| BstV1I | GCAGC | 1 cut(s) | 318 |
| BsuI | GTATCC | 1 cut(s) | 341 |
| BsuRI | GGCC | 1 cut(s) | 196 |
| Cac8I | GCNNGC | 1 cut(s) | 198 |
| CaiI | CAGNNNCTG | 1 cut(s) | 458 |
| Cfr13I | GGNCC | 1 cut(s) | 195 |
| CviAII | CATG | 2 cut(s) | 251, 589 |
| DdeI | CTNAG | 2 cut(s) | 86, 233 |
| Eco31I | GGTCTC | 1 cut(s) | 366 |
| Eco32I | GATATC | 1 cut(s) | 142 |
| Eco57I | CTGAAG | 1 cut(s) | 480 |
| EcoRII | CCWGG | 1 cut(s) | 376 |
| EcoRV | GATATC | 1 cut(s) | 142 |
| FaeI | CATG | 2 cut(s) | 254, 592 |
| FatI | CATG | 2 cut(s) | 250, 588 |
| FauI | CCCGC | 1 cut(s) | 205 |
| Fnu4HI | GCNGC | 1 cut(s) | 332 |
| Fsp4HI | GCNGC | 1 cut(s) | 332 |
| FspBI | CTAG | 2 cut(s) | 75, 369 |
| GluI | GCNGC | 1 cut(s) | 332 |
| HaeIII | GGCC | 1 cut(s) | 196 |
| Hin1II | CATG | 2 cut(s) | 254, 592 |
| HindIII | AAGCTT | 1 cut(s) | 462 |
| HinfI | GANTC | 2 cut(s) | 22, 159 |
| HphI | GGTGA | 3 cut(s) | 392, 548, 604 |
| Hpy188I | TCNGA | 3 cut(s) | 14, 21, 622 |
| Hpy188III | TCNNGA | 2 cut(s) | 26, 75 |
| Hpy99I | CGWCG | 1 cut(s) | 14 |
| HpyAV | CCTTC | 2 cut(s) | 575, 613 |
| HpyCH4III | ACNGT | 1 cut(s) | 283 |
| HpyCH4V | TGCA | 5 cut(s) | 225, 250, 476, 525, 632 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 256, 522 |
| HpyF3I | CTNAG | 2 cut(s) | 86, 233 |
| Hsp92II | CATG | 2 cut(s) | 254, 592 |
| LmnI | GCTCC | 2 cut(s) | 69, 521 |
| LpnPI | CCDG | 4 cut(s) | 279, 329, 363, 390 |
| Lsp1109I | GCAGC | 1 cut(s) | 318 |
| LweI | GCATC | 2 cut(s) | 323, 544 |
| MaeI | CTAG | 2 cut(s) | 75, 369 |
| MaeIII | GTNAC | 3 cut(s) | 289, 542, 571 |
| MboII | GAAGA | 2 cut(s) | 400, 415 |
| MlyI | GAGTC | 1 cut(s) | 168 |
| MnlI | CCTC | 3 cut(s) | 175, 296, 603 |
| MseI | TTAA | 1 cut(s) | 501 |
| MspR9I | CCNGG | 1 cut(s) | 378 |
| MvaI | CCWGG | 1 cut(s) | 378 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 256, 522 |
| NlaIII | CATG | 2 cut(s) | 254, 592 |
| NlaIV | GGNNCC | 1 cut(s) | 517 |
| NmuCI | GTSAC | 1 cut(s) | 571 |
| NspI | RCATGY | 2 cut(s) | 254, 592 |
| PfeI | GAWTC | 1 cut(s) | 22 |
| PkrI | GCNGC | 1 cut(s) | 333 |
| PleI | GAGTC | 1 cut(s) | 167 |
| PpsI | GAGTC | 1 cut(s) | 167 |
| Psp6I | CCWGG | 1 cut(s) | 376 |
| PspGI | CCWGG | 1 cut(s) | 376 |
| PspN4I | GGNNCC | 1 cut(s) | 517 |
| PspPI | GGNCC | 1 cut(s) | 195 |
| PstI | CTGCAG | 1 cut(s) | 634 |
| PstNI | CAGNNNCTG | 1 cut(s) | 458 |
| SaqAI | TTAA | 1 cut(s) | 501 |
| SatI | GCNGC | 1 cut(s) | 332 |
| Sau96I | GGNCC | 1 cut(s) | 195 |
| SchI | GAGTC | 1 cut(s) | 168 |
| ScrFI | CCNGG | 1 cut(s) | 378 |
| SetI | ASST | 7 cut(s) | 92, 149, 333, 382, 412, 466, 551 |
| SfaNI | GCATC | 2 cut(s) | 323, 544 |
| SfcI | CTRYAG | 1 cut(s) | 630 |
| SsiI | CCGC | 1 cut(s) | 198 |
| SspI | AATATT | 1 cut(s) | 498 |
| SspMI | CTAG | 2 cut(s) | 75, 369 |
| StyD4I | CCNGG | 1 cut(s) | 376 |
| TaaI | ACNGT | 1 cut(s) | 283 |
| TfiI | GAWTC | 1 cut(s) | 22 |
| Tru1I | TTAA | 1 cut(s) | 501 |
| Tru9I | TTAA | 1 cut(s) | 501 |
| TseFI | GTSAC | 1 cut(s) | 571 |
| TseI | GCWGC | 1 cut(s) | 331 |
| Tsp45I | GTSAC | 1 cut(s) | 571 |
| TspDTI | ATGAA | 1 cut(s) | 185 |
| XapI | RAATTY | 3 cut(s) | 78, 120, 172 |
| XbaI | TCTAGA | 1 cut(s) | 74 |
| XceI | RCATGY | 2 cut(s) | 254, 592 |
| XspI | CTAG | 2 cut(s) | 75, 369 |