Rroxscaffold_4G00297300

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
17227398 .. 17240008
12611 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00297300.1

Sequence Viewer

Length: 1137 bp
ATGGGCTCATACACCAGTTGCAAAGCCCCCAAAATGAAGACCCAACCCAACACCCTACTTGGGCCGTCCACTAGAGCAAAGGCCCAAATTCTCAACCTACTTTCGGCACCCGAAATGCTCGGACACCCATCCCATCCCGACCACGGCCTCGATCTCTGCTCCACCTCCCTTTGTCGGAGAAGGAGCATCCCGGCCCTCCAACTTAACACCGATCTCCGCCACCAAGACCACCAACCGGAACGCAGATCCCGCCCAAAATACACTCTCTGCTTCCCTCCAATTGCCGCTCCACCGCACCAGAAACCGAGTCGAAAACCGACAAATCCCCTCACTCGGCCACACCGCCACCAAACCAAAATCGCACATCGGCGACTTGAGTCGTGCCCGAGTTGGCCGAAGACTCTCGATTCTCGGTGCAGATCCGTTCCTAGAAAGCAATGCAGCCATGGCTTCTCCCCTTTGAATGGCAGCCGATCGAGGAGATCCGAGAAAAAGAAAATGTCACGGGGTGAGATACGAACCACGACCGATGCGGGCATGACGGGAACCATGCGCAAGATAACCGACACCGAGAGCGGTACGGAACAGCACTCCATCGATGATGGAGAAAGATCACATGGTTCCTCAAAGGCGTCTTACGCTCGGAGACTAATCTATACCGGCCGTCATGTCGAAAGTTTTCTCCCACTGGCCATTAAGAATAGATTGAGATTTAGCTCCAATCAATGTCACGCCCCGTTCGAACTGAGGTGTGGGGATTCCACACCTGGAGTTCTTCCTACTGGTTCAAACAGCTTTAAAACCCTGTTGCGCGCAGGAAATGGTGAAGAGGTTTCGATTGTCGATGTTTTCTTTATGAATTGTGGGAATCCTATTGCTGCTACACATCTTGCTAACAATATAGGAGTGGTTATGGATTGGTTCGAAAGAAGAAGGAGGAGTGAGCCTTTGGAACAAGCTGACATTTATTGGTCTTCCCTTAATGCCACAAAATACTCGGATGGTTTTAGTCTTACGGATCAGGCGGACCAAAATAGGAGCAAGTACTTAATGTACACACCATGGAATGTGTCCAATAAGCTGAGGTTTCAAATTAGGTGGGATGGTTATGAAGAGCAATCTATTGGGAGAAGTTGA

Protein Analysis

378

Amino Acids

42.75

Weight (kDa)

9.95

Isoelectric Point (pI)

66.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0023176)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 554
AccB1I GGYRCC 1 cut(s) 106
AccBSI CCGCTC 2 cut(s) 287, 576
AccII CGCG 1 cut(s) 813
AciI CCGC 8 cut(s) 217, 250, 285, 293, 343, 533, 576, 1025
AclWI GGATC 4 cut(s) 240, 414, 477, 1026
AcoI YGGCCR 4 cut(s) 335, 392, 661, 690
AcsI RAATTY 1 cut(s) 87
AcyI GRCGYC 1 cut(s) 632
AdeI CACNNNGTG 1 cut(s) 509
AfaI GTAC 3 cut(s) 580, 1046, 1055
AfiI CCNNNNNNNGG 7 cut(s) 60, 103, 143, 174, 235, 333, 464
AgsI TTSAA 3 cut(s) 463, 789, 1091
AjnI CCWGG 1 cut(s) 766
AluBI AGCT 4 cut(s) 717, 795, 959, 1081
AluI AGCT 4 cut(s) 717, 795, 959, 1081
Alw26I GTCTC 1 cut(s) 640
AlwI GGATC 4 cut(s) 240, 414, 477, 1026
Ama87I CYCGRG 1 cut(s) 385
AoxI GGCC 8 cut(s) 62, 81, 145, 192, 335, 392, 661, 690
ApeKI GCWGC 3 cut(s) 441, 468, 878
ApoI RAATTY 1 cut(s) 87
Asp700I GAANNNNTTC 1 cut(s) 678
AspLEI GCGC 3 cut(s) 555, 813, 815
AspS9I GGNCC 4 cut(s) 62, 82, 193, 1027
AsuC2I CCSGG 1 cut(s) 191
AsuHPI GGTGA 2 cut(s) 521, 836
AsuII TTCGAA 2 cut(s) 741, 924
AvaI CYCGRG 1 cut(s) 385
AvaII GGWCC 1 cut(s) 1027
BaeGI GKGCMC 1 cut(s) 386
BalI TGGCCA 1 cut(s) 692
BanI GGYRCC 1 cut(s) 106
BanII GRGCYC 1 cut(s) 8
BbsI GAAGAC 3 cut(s) 44, 404, 966
BbvCI CCTCAGC 1 cut(s) 1082
BbvI GCAGC 3 cut(s) 453, 480, 865
BccI CCATC 6 cut(s) 136, 141, 596, 602, 995, 1097
BceAI ACGGC 3 cut(s) 49, 160, 648
BciT130I CCWGG 1 cut(s) 768
BcnI CCSGG 1 cut(s) 191
BcoDI GTCTC 1 cut(s) 640
BfaI CTAG 2 cut(s) 72, 429
BisI GCNGC 4 cut(s) 285, 442, 469, 879
BlsI GCNGC 4 cut(s) 286, 443, 470, 880
BmcAI AGTACT 1 cut(s) 1046
Bme1390I CCNGG 2 cut(s) 191, 768
Bme18I GGWCC 1 cut(s) 1027
BmeT110I CYCGRG 1 cut(s) 385
BmgT120I GGNCC 4 cut(s) 62, 82, 193, 1027
BmiI GGNNCC 3 cut(s) 108, 547, 622
BmrFI CCNGG 2 cut(s) 191, 768
BmsI GCATC 2 cut(s) 195, 520
BoxI GACNNNNGTC 1 cut(s) 376
BpiI GAAGAC 3 cut(s) 44, 404, 966
BpmI CTGGAG 1 cut(s) 789
Bpu10I CCTNAGC 1 cut(s) 1082
Bpu14I TTCGAA 2 cut(s) 741, 924
BpuEI CTTGAG 1 cut(s) 395
BpuMI CCSGG 1 cut(s) 191
Bsa29I ATCGAT 1 cut(s) 597
BsaHI GRCGYC 1 cut(s) 632
BsaJI CCNNGG 3 cut(s) 142, 445, 1061
BsaWI WCCGGW 1 cut(s) 235
Bsc4I CCNNNNNNNGG 7 cut(s) 60, 103, 143, 174, 235, 333, 464
Bse118I RCCGGY 1 cut(s) 659
Bse1I ACTGG 3 cut(s) 15, 693, 787
Bse3DI GCAATG 1 cut(s) 443
BseBI CCWGG 1 cut(s) 768
BseCI ATCGAT 1 cut(s) 597
BseDI CCNNGG 3 cut(s) 142, 445, 1061
BseGI GGATG 5 cut(s) 128, 133, 186, 1006, 1108
BseLI CCNNNNNNNGG 7 cut(s) 60, 103, 143, 174, 235, 333, 464
BseMI GCAATG 1 cut(s) 443
BseMII CTCAG 2 cut(s) 737, 1073
BseNI ACTGG 3 cut(s) 15, 693, 787
BsePI GCGCGC 1 cut(s) 811
BseRI GAGGAG 2 cut(s) 493, 952
BseSI GKGCMC 1 cut(s) 386
BseX3I CGGCCG 1 cut(s) 661
BseXI GCAGC 3 cut(s) 453, 480, 865
BsgI GTGCAG 1 cut(s) 436
Bsh1236I CGCG 1 cut(s) 813
Bsh1285I CGRYCG 3 cut(s) 476, 528, 664
BshFI GGCC 8 cut(s) 64, 83, 147, 194, 337, 394, 663, 692
BshNI GGYRCC 1 cut(s) 106
BshVI ATCGAT 1 cut(s) 597
BsiEI CGRYCG 3 cut(s) 476, 528, 664
BsiHKCI CYCGRG 1 cut(s) 385
BsiSI CCGG 3 cut(s) 191, 236, 660
BslI CCNNNNNNNGG 7 cut(s) 60, 103, 143, 174, 235, 333, 464
BsmAI GTCTC 1 cut(s) 640
BsnI GGCC 8 cut(s) 64, 83, 147, 194, 337, 394, 663, 692
BsoBI CYCGRG 1 cut(s) 385
Bsp119I TTCGAA 2 cut(s) 741, 924
Bsp1286I GDGCHC 2 cut(s) 8, 386
Bsp1407I TGTACA 1 cut(s) 1053
Bsp143I GATC 8 cut(s) 151, 211, 245, 419, 473, 482, 611, 1018
Bsp19I CCATGG 2 cut(s) 445, 1061
BspACI CCGC 8 cut(s) 217, 250, 285, 293, 343, 533, 576, 1025
BspANI GGCC 8 cut(s) 64, 83, 147, 194, 337, 394, 663, 692
BspCNI CTCAG 2 cut(s) 738, 1074
BspDI ATCGAT 1 cut(s) 597
BspFNI CGCG 1 cut(s) 813
BspLI GGNNCC 3 cut(s) 108, 547, 622
BspPI GGATC 4 cut(s) 240, 414, 477, 1026
BspQI GCTCTTC 1 cut(s) 1107
BspT104I TTCGAA 2 cut(s) 741, 924
BspT107I GGYRCC 1 cut(s) 106
BsrBI CCGCTC 2 cut(s) 287, 576
BsrDI GCAATG 1 cut(s) 443
BsrFI RCCGGY 1 cut(s) 659
BsrGI TGTACA 1 cut(s) 1053
BsrI ACTGG 3 cut(s) 15, 693, 787
BssAI RCCGGY 1 cut(s) 659
BssECI CCNNGG 3 cut(s) 142, 445, 1061
BssHII GCGCGC 1 cut(s) 811
BssMI GATC 8 cut(s) 151, 211, 245, 419, 473, 482, 611, 1018
BssNI GRCGYC 1 cut(s) 632
BssT1I CCWWGG 2 cut(s) 445, 1061
Bst2UI CCWGG 1 cut(s) 768
Bst6I CTCTTC 2 cut(s) 822, 1107
BstACI GRCGYC 1 cut(s) 632
BstAUI TGTACA 1 cut(s) 1053
BstBI TTCGAA 2 cut(s) 741, 924
BstC8I GCNNGC 2 cut(s) 535, 813
BstDEI CTNAG 2 cut(s) 746, 1082
BstDSI CCRYGG 3 cut(s) 142, 445, 1061
BstF5I GGATG 5 cut(s) 128, 133, 186, 1006, 1108
BstFNI CGCG 1 cut(s) 813
BstHHI GCGC 3 cut(s) 555, 813, 815
BstKTI GATC 8 cut(s) 154, 214, 248, 422, 476, 485, 614, 1021
BstMAI GTCTC 1 cut(s) 640
BstMBI GATC 8 cut(s) 151, 211, 245, 419, 473, 482, 611, 1018
BstMCI CGRYCG 3 cut(s) 476, 528, 664
BstMWI GCNNNNNNNGC 3 cut(s) 249, 447, 638
BstNI CCWGG 1 cut(s) 768
BstPAI GACNNNNGTC 1 cut(s) 376
BstSCI CCNGG 2 cut(s) 189, 766
BstSLI GKGCMC 1 cut(s) 386
BstUI CGCG 1 cut(s) 813
BstV1I GCAGC 3 cut(s) 453, 480, 865
BstV2I GAAGAC 3 cut(s) 44, 404, 966
BstX2I RGATCY 3 cut(s) 245, 419, 482
BstYI RGATCY 3 cut(s) 245, 419, 482
BstZI CGGCCG 1 cut(s) 661
Bsu15I ATCGAT 1 cut(s) 597
BsuRI GGCC 8 cut(s) 64, 83, 147, 194, 337, 394, 663, 692
BsuTUI ATCGAT 1 cut(s) 597
BtgI CCRYGG 3 cut(s) 142, 445, 1061
BtsCI GGATG 5 cut(s) 128, 133, 186, 1006, 1108
BtsIMutI CAGTG 1 cut(s) 686
Cac8I GCNNGC 2 cut(s) 535, 813
CfoI GCGC 3 cut(s) 555, 813, 815
Cfr10I RCCGGY 1 cut(s) 659
Cfr13I GGNCC 4 cut(s) 62, 82, 193, 1027
ClaI ATCGAT 1 cut(s) 597
CseI GACGC 1 cut(s) 621
Csp6I GTAC 3 cut(s) 579, 1045, 1054
CspCI CAANNNNNGTGG 2 cut(s) 1079, 1114
CviAII CATG 6 cut(s) 446, 538, 550, 617, 668, 1062
CviQI GTAC 3 cut(s) 579, 1045, 1054
DdeI CTNAG 2 cut(s) 746, 1082
DpnI GATC 8 cut(s) 153, 213, 247, 421, 475, 484, 613, 1020
DpnII GATC 8 cut(s) 151, 211, 245, 419, 473, 482, 611, 1018
DraI TTTAAA 1 cut(s) 799
DraIII CACNNNGTG 1 cut(s) 509
EaeI YGGCCR 4 cut(s) 335, 392, 661, 690
EagI CGGCCG 1 cut(s) 661
Eam1104I CTCTTC 2 cut(s) 822, 1107
EarI CTCTTC 2 cut(s) 822, 1107
EciI GGCGGA 2 cut(s) 206, 1040
EclXI CGGCCG 1 cut(s) 661
Eco130I CCWWGG 2 cut(s) 445, 1061
Eco24I GRGCYC 1 cut(s) 8
Eco47I GGWCC 1 cut(s) 1027
Eco52I CGGCCG 1 cut(s) 661
Eco88I CYCGRG 1 cut(s) 385
EcoRII CCWGG 1 cut(s) 766
EcoT14I CCWWGG 2 cut(s) 445, 1061
EcoT38I GRGCYC 1 cut(s) 8
ErhI CCWWGG 2 cut(s) 445, 1061
FaeI CATG 6 cut(s) 449, 541, 553, 620, 671, 1065
FatI CATG 6 cut(s) 445, 537, 549, 616, 667, 1061
FauI CCCGC 2 cut(s) 257, 526
Fnu4HI GCNGC 4 cut(s) 285, 442, 469, 879
FokI GGATG 5 cut(s) 115, 120, 173, 1013, 1115
FriOI GRGCYC 1 cut(s) 8
Fsp4HI GCNGC 4 cut(s) 285, 442, 469, 879
FspBI CTAG 2 cut(s) 72, 429
FspI TGCGCA 1 cut(s) 554
GlaI GCGC 3 cut(s) 554, 812, 814
GluI GCNGC 4 cut(s) 285, 442, 469, 879
GsuI CTGGAG 1 cut(s) 789
HaeIII GGCC 8 cut(s) 64, 83, 147, 194, 337, 394, 663, 692
HapII CCGG 3 cut(s) 191, 236, 660
HgaI GACGC 1 cut(s) 621
HhaI GCGC 3 cut(s) 555, 813, 815
Hin1I GRCGYC 1 cut(s) 632
Hin1II CATG 6 cut(s) 449, 541, 553, 620, 671, 1065
Hin6I GCGC 3 cut(s) 553, 811, 813
HinP1I GCGC 3 cut(s) 553, 811, 813
HinfI GANTC 6 cut(s) 307, 377, 400, 407, 758, 868
HpaII CCGG 3 cut(s) 191, 236, 660
HphI GGTGA 2 cut(s) 521, 836
Hpy166II GTNNAC 2 cut(s) 69, 1056
Hpy188I TCNGA 5 cut(s) 122, 177, 487, 645, 1000
Hpy188III TCNNGA 2 cut(s) 137, 404
Hpy8I GTNNAC 2 cut(s) 69, 1056
HpyAV CCTTC 2 cut(s) 174, 927
HpyCH4V TGCA 3 cut(s) 21, 417, 441
HpyF10VI GCNNNNNNNGC 3 cut(s) 249, 447, 638
HpyF3I CTNAG 2 cut(s) 746, 1082
Hsp92I GRCGYC 1 cut(s) 632
Hsp92II CATG 6 cut(s) 449, 541, 553, 620, 671, 1065
HspAI GCGC 3 cut(s) 553, 811, 813
Kzo9I GATC 8 cut(s) 151, 211, 245, 419, 473, 482, 611, 1018
LguI GCTCTTC 1 cut(s) 1107
LmnI GCTCC 5 cut(s) 164, 183, 292, 722, 1038
Lsp1109I GCAGC 3 cut(s) 453, 480, 865
LweI GCATC 2 cut(s) 195, 520
MaeI CTAG 2 cut(s) 72, 429
MaeIII GTNAC 2 cut(s) 501, 728
MalI GATC 8 cut(s) 153, 213, 247, 421, 475, 484, 613, 1020
MbiI CCGCTC 2 cut(s) 287, 576
MboI GATC 8 cut(s) 151, 211, 245, 419, 473, 482, 611, 1018
MboII GAAGA 7 cut(s) 49, 409, 767, 839, 942, 966, 1124
MfeI CAATTG 1 cut(s) 279
MflI RGATCY 3 cut(s) 245, 419, 482
MhlI GDGCHC 2 cut(s) 8, 386
MlsI TGGCCA 1 cut(s) 692
MluCI AATT 4 cut(s) 87, 279, 859, 1092
MluNI TGGCCA 1 cut(s) 692
MlyI GAGTC 3 cut(s) 316, 386, 394
MmeI TCCRAC 2 cut(s) 155, 223
Mox20I TGGCCA 1 cut(s) 692
MroXI GAANNNNTTC 1 cut(s) 678
MscI TGGCCA 1 cut(s) 692
MseI TTAA 5 cut(s) 204, 696, 798, 981, 1049
Msp20I TGGCCA 1 cut(s) 692
MspI CCGG 3 cut(s) 191, 236, 660
MspR9I CCNGG 2 cut(s) 191, 768
MunI CAATTG 1 cut(s) 279
MvaI CCWGG 1 cut(s) 768
MvnI CGCG 1 cut(s) 813
MwoI GCNNNNNNNGC 3 cut(s) 249, 447, 638
NciI CCSGG 1 cut(s) 191
NcoI CCATGG 2 cut(s) 445, 1061
NdeII GATC 8 cut(s) 151, 211, 245, 419, 473, 482, 611, 1018
NlaIII CATG 6 cut(s) 449, 541, 553, 620, 671, 1065
NlaIV GGNNCC 3 cut(s) 108, 547, 622
NmeAIII GCCGAG 1 cut(s) 313
NmuCI GTSAC 2 cut(s) 501, 728
NsbI TGCGCA 1 cut(s) 554
NspV TTCGAA 2 cut(s) 741, 924
PauI GCGCGC 1 cut(s) 811
PciSI GCTCTTC 1 cut(s) 1107
PcsI WCGNNNNNNNCGW 1 cut(s) 738
PdmI GAANNNNTTC 1 cut(s) 678
PfeI GAWTC 3 cut(s) 407, 758, 868
PkrI GCNGC 4 cut(s) 286, 443, 470, 880
Ple19I CGATCG 1 cut(s) 476
PleI GAGTC 3 cut(s) 315, 385, 394
PpsI GAGTC 3 cut(s) 315, 385, 394
PshAI GACNNNNGTC 1 cut(s) 376
Psp6I CCWGG 1 cut(s) 766
PspGI CCWGG 1 cut(s) 766
PspN4I GGNNCC 3 cut(s) 108, 547, 622
PspPI GGNCC 4 cut(s) 62, 82, 193, 1027
PsuI RGATCY 3 cut(s) 245, 419, 482
PteI GCGCGC 1 cut(s) 811
PvuI CGATCG 1 cut(s) 476
RsaI GTAC 3 cut(s) 580, 1046, 1055
RsaNI GTAC 3 cut(s) 579, 1045, 1054
SapI GCTCTTC 1 cut(s) 1107
SaqAI TTAA 5 cut(s) 204, 696, 798, 981, 1049
SatI GCNGC 4 cut(s) 285, 442, 469, 879
Sau3AI GATC 8 cut(s) 151, 211, 245, 419, 473, 482, 611, 1018
Sau96I GGNCC 4 cut(s) 62, 82, 193, 1027
ScaI AGTACT 1 cut(s) 1046
SchI GAGTC 3 cut(s) 316, 386, 394
ScrFI CCNGG 2 cut(s) 191, 768
SduI GDGCHC 2 cut(s) 8, 386
SfaNI GCATC 2 cut(s) 195, 520
SfuI TTCGAA 2 cut(s) 741, 924
SinI GGWCC 1 cut(s) 1027
SmlI CTYRAG 1 cut(s) 374
SmoI CTYRAG 1 cut(s) 374
Sse9I AATT 4 cut(s) 87, 279, 859, 1092
SsiI CCGC 8 cut(s) 217, 250, 285, 293, 343, 533, 576, 1025
SspMI CTAG 2 cut(s) 72, 429
StyD4I CCNGG 2 cut(s) 189, 766
StyI CCWWGG 2 cut(s) 445, 1061
TaqII GACCGA 1 cut(s) 542
TasI AATT 4 cut(s) 87, 279, 859, 1092
TatI WGTACW 2 cut(s) 1044, 1053
TauI GCSGC 1 cut(s) 287
TfiI GAWTC 3 cut(s) 407, 758, 868
Tru1I TTAA 5 cut(s) 204, 696, 798, 981, 1049
Tru9I TTAA 5 cut(s) 204, 696, 798, 981, 1049
TscAI CASTG 1 cut(s) 693
TseFI GTSAC 2 cut(s) 501, 728
TseI GCWGC 3 cut(s) 441, 468, 878
Tsp45I GTSAC 2 cut(s) 501, 728
TspDTI ATGAA 3 cut(s) 50, 872, 1125
TspGWI ACGGA 3 cut(s) 412, 596, 1031
TspRI CASTG 1 cut(s) 693
VpaK11BI GGWCC 1 cut(s) 1027
XapI RAATTY 1 cut(s) 87
XmnI GAANNNNTTC 1 cut(s) 678
XspI CTAG 2 cut(s) 72, 429
ZrmI AGTACT 1 cut(s) 1046
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.