Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0007464

Physical Location & Seq

Genomic Coordinates Forward (+)

28667254 .. 28670876

Gene Structure 3623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00307390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGGAGAGGGGTCCAGAGTCAAAGGCGTTTCCTGTGAAATTTCCCATGGTAGGTGAGATCTCATTCAGTCGTACAACTTCAACAAGAGCAGGAGGTCACTTGTCAAATTTGCGCACTGGTTTGGGAAGAGAAGACGTTGCACCGATAAGAGAAAGGGGTCAGCTACCCAATGGGCGCTTGGCTTTCGTGAGAGAAGAAATTGCGTCAAACTTGCAGTCTATTTTGTTAAAAGATGGAAGATCTGATTCACGAGAATCTCAAGATTCAGACTCGCCCGTACCTTTAAGGATACGAAATGGAAAGGCCTCTTTTCCAGAAGAGGAAGTATTTATGTCTGAGGCTGTTACATTCAAGGGACATGGGGAATTATTCGACGAAGGGGGTCCTAGTTCTTTCTCTGGGGTTAGTCACCCTCCAGAACCTGTTGATACGGATTTAATGAAGACAGTTTATGTTCCGGTTAGTCAGAATCAGACTGAACCTGGGTGCTTGATGAAGAGCTTATCTATAAAAGGCCCTTTCCTCGAAGATCTTTCACTCCATGTTCCTGCAAAGAAACCAATCCCAACTGCTCTTTCCCCTTCAGAAAGCCTGGTTGAAGAACCCAACGACGTAGATGCATTGTCTCCACCATTTGCGGTTCATCGTGCATCACAAAATACAGATAATTCGCTCCTTCCTCCAGATTCTGAGGAGAAGGAGTGCGTTTGGGATGCTTCTTTGCCTCCTAGTGGCAATGTAAGTCCGCTAAGTAGTATTGACAGTACTGGTGTTGTCACTGCTATGAGCATTGTCAATAGCCGTGCCAGTACTTACCGAAGTGACGCAATGACAAGTGATGGTATGCTCAGTGTTGGGAGGACCTTTGAATGTACCAAAGGGAGTGTTAGAGGAGAGTCACTAGAGAGTGCAAAAACTAGTGTTAGCCGGGCGAGTGATAGTAGTGGGCTTAGTGATGACAGTAATTGGAGCAACATTACTGGGAGTGCCAACAAGCCCCACAAAGGAAATGATCCTAGGTGGAAAGCTATTCTTGCTATTCGAGCTAGGGATGGGATTTTGGGTATGAGCCATTTTAAATTACTTAAACGCCTTGGTTGTGGTGATATTGGTAGTGTATATCTTTCAGAACTTAGTGGAACCCGTTGTTATTTTGCAATGAAAGTAATGGACAAGGCATCCCTTGCAAGCAGGAAGAAGTTAACTAGGGCTCAGACAGAGAGGGAGATATTGCAACTCCTGGATCATCCATTCCTTCCAACCTTATATACACATTTTGAGACCGACAGATTCTCCTGTTTGGTCATGGAATATTGTCCAGGTGGTGATCTGCACACTCTGAGGCAACGGCAACCCGGAAAACATTTCTCTGAGTATGCTGCAAGATTCTATGCTGCGGAGGTTCTGTTGGCACTAGAGTATCTACACATGCTTGGAGTTGTCTACAGGGACTTAAAACCTGAAAATGTGCTCGTCCGGGATGATGGCCATATAATGCTCTCAGACTTTGACCTTTCCCTGAGATGCACTGTTTCACCAACTCTGATTAGAACATCTGATTCTGATCCTTCGAAACGAGCAGCAGGGGGTGCATTCTGCGTCCAGCCTGCATGTATTGAGCCCTCATCAGCATGCATTCAACCTGCTTGCTTTATCCCCAGGCTCTTCCCTAAGAAAAACAAGAAGACCGGAAAACCTAAAGCTGAGCCTGGATTTCTGAGCAATACACTTCCAGAGCTTGTGGCGGAGCCCACTCAAGCTCGGTCTATGTCCTTTGTTGGAACCCATGAATACCTAGCCCCTGAAATCATTAAGGGAGAAGGCCATGGTAGTGCAGTTGATTGGTGGACATTTGGTATATTCCTGCATGAGTTGCTGTATGGTAAAACCCCCTTCAAAGGCTCAGGAAATCGTGCTACATTGTTTAATGTGGTGGGGCAGCAACTCAGATTCCCCGAGGCACCAGCAACTAGTTATGCAGGCCGCGATCTAATCAGGGGATTGCTGGTGAAGGAGCCACAACACCGGCTTGGGGTGAAAAGGGGTGCAACTGAGATCAAACAGCATCCCTTCTTTGAAGGCGTCAACTGGGCTCTTATTCGATGCAGCACACCGCCAGAAGTACCGAGACCAATGGAACCTGAGCTGCCAGGGAAATTTGGGGCAGTTGATCCTATTGGTGTTGGAAGCAACAGTAAAAGGATGGTAGGGTCAGATGTGAAGTCCGGGGGTAAATATCTAGACTTCGAGTTCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

752

Amino Acids

82.21

Weight (kDa)

6.83

Isoelectric Point (pI)

50.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	360 - 510	4.4e-36	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	360 - 509	2.6e-18	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	589 - 692	4.4e-20	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	596 - 677	5.9e-06	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007464)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44830 AT2G44830 AT2G44830
fragaria_vesca	FvH4_7g10180 FvH4_7g10180 FvH4_7g10180 FvH4_7g10180 FvH4_7g10180
malus_domestica	MD02G1212600.v1.1 MD07G1108800.v1.1
prunus_persica	Prupe.2G131700_v2.0.a1 Prupe.2G131700_v2.0.a1
pyrus_communis	pycom02g17610 pycom07g09340
rosa_chinensis	RchiOBHm_Chr1g0347901
rosa_laevigata	RLG00000028705
rosa_multiflora	Rmu_sc0034852.1_g000001 Rmu_ssc0000342.1_g000010
rosa_roxburghii	Rroxscaffold_4G00307390
rosa_rugosa	Rorug01G0190400
rosa_samantha	Rh1AG208600 Rh1BG173200 Rh1CG192900 Rh1DG203100
rosa_wichuraiana	Rw1G017340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	113
Acc36I	ACCTGC	1 cut(s)	1651
AccB1I	GGYRCC	1 cut(s)	1960
AccI	GTMKAC	1 cut(s)	1443
AccII	CGCG	1 cut(s)	1986
AciI	CCGC	6 cut(s)	638, 746, 1397, 1745, 1984, 2114
AclWI	GGATC	4 cut(s)	1007, 1251, 1559, 2165
AcoI	YGGCCR	1 cut(s)	1486
AcsI	RAATTY	3 cut(s)	38, 106, 2156
AcuI	CTGAAG	1 cut(s)	567
AcyI	GRCGYC	1 cut(s)	2082
AfaI	GTAC	6 cut(s)	73, 279, 766, 811, 874, 2124
AfiI	CCNNNNNNNGG	5 cut(s)	50, 731, 1004, 1898, 2032
AgsI	TTSAA	7 cut(s)	81, 352, 599, 869, 1640, 1897, 2078
AhlI	ACTAGT	2 cut(s)	917, 1970
AjnI	CCWGG	7 cut(s)	481, 591, 1239, 1318, 1658, 1708, 2149
AjuI	GAANNNNNNNTTGG	2 cut(s)	559, 591
AluBI	AGCT	8 cut(s)	163, 501, 1028, 1046, 1703, 1738, 1760, 2146
AluI	AGCT	8 cut(s)	163, 501, 1028, 1046, 1703, 1738, 1760, 2146
Alw21I	GWGCWC	1 cut(s)	1473
Alw26I	GTCTC	3 cut(s)	630, 1274, 2122
AlwI	GGATC	4 cut(s)	1007, 1251, 1559, 2165
AlwNI	CAGNNNCTG	2 cut(s)	422, 689
Ama87I	CYCGRG	1 cut(s)	1955
AoxI	GGCC	5 cut(s)	303, 514, 1486, 1822, 1981
ApeKI	GCWGC	6 cut(s)	1379, 1394, 1580, 1939, 2106, 2146
ApoI	RAATTY	3 cut(s)	38, 106, 2156
ArsI	GACNNNNNNTTYG	2 cut(s)	200, 232
AspA2I	CCTAGG	1 cut(s)	1016
AspLEI	GCGC	2 cut(s)	114, 177
AspS9I	GGNCC	4 cut(s)	11, 383, 515, 861
AsuC2I	CCSGG	4 cut(s)	929, 1356, 1478, 2227
AsuHPI	GGTGA	7 cut(s)	65, 401, 1115, 1337, 1527, 2020, 2047
AsuII	TTCGAA	1 cut(s)	1571
AvaI	CYCGRG	1 cut(s)	1955
AvaII	GGWCC	3 cut(s)	11, 383, 861
AvrII	CCTAGG	1 cut(s)	1016
BaeI	ACNNNNGTAYC	2 cut(s)	1403, 1436
BalI	TGGCCA	1 cut(s)	1488
BanI	GGYRCC	1 cut(s)	1960
BanII	GRGCYC	4 cut(s)	1213, 1623, 1752, 2095
BauI	CACGAG	1 cut(s)	249
BbsI	GAAGAC	3 cut(s)	138, 449, 1691
Bbv12I	GWGCWC	1 cut(s)	1473
BbvI	GCAGC	6 cut(s)	1366, 1381, 1592, 1951, 2118, 2133
BccI	CCATC	5 cut(s)	227, 833, 1046, 1478, 2197
BceAI	ACGGC	2 cut(s)	786, 1364
BcgI	CGANNNNNNTGC	2 cut(s)	599, 633
BciT130I	CCWGG	7 cut(s)	483, 593, 1241, 1320, 1660, 1710, 2151
BciVI	GTATCC	1 cut(s)	282
BcnI	CCSGG	4 cut(s)	929, 1356, 1478, 2227
BcoDI	GTCTC	3 cut(s)	630, 1274, 2122
BcuI	ACTAGT	2 cut(s)	917, 1970
BfmI	CTRYAG	1 cut(s)	1444
BfoI	RGCGCY	1 cut(s)	178
BfuAI	ACCTGC	1 cut(s)	1651
BfuI	GTATCC	1 cut(s)	282
BglII	AGATCT	3 cut(s)	57, 239, 529
BisI	GCNGC	7 cut(s)	1380, 1395, 1581, 1940, 1984, 2107, 2147
BlnI	CCTAGG	1 cut(s)	1016
BlpI	GCTNAGC	1 cut(s)	1704
BlsI	GCNGC	7 cut(s)	1381, 1396, 1582, 1941, 1985, 2108, 2148
BmcAI	AGTACT	2 cut(s)	766, 811
Bme18I	GGWCC	3 cut(s)	11, 383, 861
BmeT110I	CYCGRG	1 cut(s)	1955
BmgT120I	GGNCC	4 cut(s)	11, 383, 515, 861
BmiI	GGNNCC	8 cut(s)	12, 384, 1141, 1749, 1783, 1962, 2016, 2139
BmrI	ACTGGG	2 cut(s)	990, 2098
BmsI	GCATC	7 cut(s)	607, 659, 703, 1187, 1514, 2074, 2093
BmuI	ACTGGG	2 cut(s)	990, 2098
BpiI	GAAGAC	3 cut(s)	138, 449, 1691
BpmI	CTGGAG	2 cut(s)	399, 666
Bpu10I	CCTNAGC	2 cut(s)	1903, 2142
Bpu1102I	GCTNAGC	1 cut(s)	1704
Bpu14I	TTCGAA	1 cut(s)	1571
BpuEI	CTTGAG	2 cut(s)	243, 1740
BpuMI	CCSGG	4 cut(s)	929, 1356, 1478, 2227
BsaBI	GATNNNNATC	1 cut(s)	1563
BsaHI	GRCGYC	1 cut(s)	2082
BsaI	GGTCTC	2 cut(s)	1274, 2122
BsaJI	CCNNGG	9 cut(s)	45, 482, 1016, 1093, 1658, 1825, 1956, 2150, 2226
BsaWI	WCCGGW	2 cut(s)	457, 1688
BsaXI	ACNNNNNCTCC	6 cut(s)	686, 716, 1277, 1307, 1391, 1421
Bsc4I	CCNNNNNNNGG	5 cut(s)	50, 731, 1004, 1898, 2032
Bse118I	RCCGGY	1 cut(s)	2025
Bse1I	ACTGG	5 cut(s)	121, 772, 807, 985, 2093
Bse3DI	GCAATG	3 cut(s)	742, 834, 1164
Bse8I	GATNNNNATC	1 cut(s)	1563
BseBI	CCWGG	7 cut(s)	483, 593, 1241, 1320, 1660, 1710, 2151
BseDI	CCNNGG	9 cut(s)	45, 482, 1016, 1093, 1658, 1825, 1956, 2150, 2226
BseGI	GGATG	7 cut(s)	718, 1057, 1178, 1246, 1486, 2065, 2208
BseJI	GATNNNNATC	1 cut(s)	1563
BseLI	CCNNNNNNNGG	5 cut(s)	50, 731, 1004, 1898, 2032
BseMI	GCAATG	3 cut(s)	742, 834, 1164
BseNI	ACTGG	5 cut(s)	121, 772, 807, 985, 2093
BseRI	GAGGAG	2 cut(s)	707, 906
BseXI	GCAGC	6 cut(s)	1366, 1381, 1592, 1951, 2118, 2133
BsgI	GTGCAG	2 cut(s)	1316, 1854
Bsh1236I	CGCG	1 cut(s)	1986
BshFI	GGCC	5 cut(s)	305, 516, 1488, 1824, 1983
BshNI	GGYRCC	1 cut(s)	1960
BsiHKAI	GWGCWC	1 cut(s)	1473
BsiHKCI	CYCGRG	1 cut(s)	1955
BsiSI	CCGG	7 cut(s)	458, 928, 1356, 1477, 1689, 2026, 2226
BslFI	GGGAC	2 cut(s)	369, 1463
BslI	CCNNNNNNNGG	5 cut(s)	50, 731, 1004, 1898, 2032
BsmAI	GTCTC	3 cut(s)	630, 1274, 2122
BsmFI	GGGAC	2 cut(s)	369, 1463
BsmI	GAATGC	2 cut(s)	1592, 1635
BsnI	GGCC	5 cut(s)	305, 516, 1488, 1824, 1983
Bso31I	GGTCTC	2 cut(s)	1274, 2122
BsoBI	CYCGRG	1 cut(s)	1955
Bsp119I	TTCGAA	1 cut(s)	1571
Bsp1286I	GDGCHC	5 cut(s)	1213, 1473, 1623, 1752, 2095
Bsp1720I	GCTNAGC	1 cut(s)	1704
Bsp19I	CCATGG	2 cut(s)	45, 1825
BspACI	CCGC	6 cut(s)	638, 746, 1397, 1745, 1984, 2114
BspANI	GGCC	5 cut(s)	305, 516, 1488, 1824, 1983
BspFNI	CGCG	1 cut(s)	1986
BspLI	GGNNCC	8 cut(s)	12, 384, 1141, 1749, 1783, 1962, 2016, 2139
BspMI	ACCTGC	1 cut(s)	1651
BspPI	GGATC	4 cut(s)	1007, 1251, 1559, 2165
BspQI	GCTCTTC	2 cut(s)	491, 1670
BspT104I	TTCGAA	1 cut(s)	1571
BspT107I	GGYRCC	1 cut(s)	1960
BspTNI	GGTCTC	2 cut(s)	1274, 2122
BsrDI	GCAATG	3 cut(s)	742, 834, 1164
BsrFI	RCCGGY	1 cut(s)	2025
BsrI	ACTGG	5 cut(s)	121, 772, 807, 985, 2093
BssAI	RCCGGY	1 cut(s)	2025
BssECI	CCNNGG	9 cut(s)	45, 482, 1016, 1093, 1658, 1825, 1956, 2150, 2226
BssNI	GRCGYC	1 cut(s)	2082
BssSI	CACGAG	1 cut(s)	249
BssT1I	CCWWGG	4 cut(s)	45, 1016, 1093, 1825
Bst2BI	CACGAG	1 cut(s)	249
Bst2UI	CCWGG	7 cut(s)	483, 593, 1241, 1320, 1660, 1710, 2151
Bst4CI	ACNGT	5 cut(s)	448, 764, 962, 1531, 2195
Bst6I	CTCTTC	4 cut(s)	121, 312, 491, 1670
BstACI	GRCGYC	1 cut(s)	2082
BstAPI	GCANNNNNTGC	3 cut(s)	1184, 1589, 1873
BstBI	TTCGAA	1 cut(s)	1571
BstC8I	GCNNGC	5 cut(s)	1189, 1608, 1633, 1648, 1981
BstDSI	CCRYGG	2 cut(s)	45, 1825
BstF5I	GGATG	7 cut(s)	718, 1057, 1178, 1246, 1486, 2065, 2208
BstFNI	CGCG	1 cut(s)	1986
BstH2I	RGCGCY	1 cut(s)	178
BstHHI	GCGC	2 cut(s)	114, 177
BstMAI	GTCTC	3 cut(s)	630, 1274, 2122
BstMWI	GCNNNNNNNGC	5 cut(s)	1034, 1043, 1184, 1589, 1873
BstNI	CCWGG	7 cut(s)	483, 593, 1241, 1320, 1660, 1710, 2151
BstNSI	RCATGY	3 cut(s)	1432, 1614, 1635
BstSFI	CTRYAG	1 cut(s)	1444
BstUI	CGCG	1 cut(s)	1986
BstV1I	GCAGC	6 cut(s)	1366, 1381, 1592, 1951, 2118, 2133
BstV2I	GAAGAC	3 cut(s)	138, 449, 1691
BstX2I	RGATCY	3 cut(s)	57, 239, 529
BstYI	RGATCY	3 cut(s)	57, 239, 529
BsuI	GTATCC	1 cut(s)	282
BsuRI	GGCC	5 cut(s)	305, 516, 1488, 1824, 1983
BtgI	CCRYGG	2 cut(s)	45, 1825
BtsCI	GGATG	7 cut(s)	718, 1057, 1178, 1246, 1486, 2065, 2208
BtsI	GCAGTG	1 cut(s)	777
BtsIMutI	CAGTG	4 cut(s)	114, 777, 856, 1527
BveI	ACCTGC	1 cut(s)	1651
Cac8I	GCNNGC	5 cut(s)	1189, 1608, 1633, 1648, 1981
CaiI	CAGNNNCTG	2 cut(s)	422, 689
CfoI	GCGC	2 cut(s)	114, 177
Cfr10I	RCCGGY	1 cut(s)	2025
Cfr13I	GGNCC	4 cut(s)	11, 383, 515, 861
CseI	GACGC	4 cut(s)	192, 833, 1588, 2071
Csp6I	GTAC	6 cut(s)	72, 278, 765, 810, 873, 2123
CviQI	GTAC	6 cut(s)	72, 278, 765, 810, 873, 2123
DraI	TTTAAA	1 cut(s)	1078
EaeI	YGGCCR	1 cut(s)	1486
Eam1104I	CTCTTC	4 cut(s)	121, 312, 491, 1670
EarI	CTCTTC	4 cut(s)	121, 312, 491, 1670
EciI	GGCGGA	1 cut(s)	1760
Eco130I	CCWWGG	4 cut(s)	45, 1016, 1093, 1825
Eco147I	AGGCCT	1 cut(s)	305
Eco24I	GRGCYC	4 cut(s)	1213, 1623, 1752, 2095
Eco31I	GGTCTC	2 cut(s)	1274, 2122
Eco47I	GGWCC	3 cut(s)	11, 383, 861
Eco57I	CTGAAG	1 cut(s)	567
Eco88I	CYCGRG	1 cut(s)	1955
EcoO109I	RGGNCCY	3 cut(s)	383, 515, 861
EcoRII	CCWGG	7 cut(s)	481, 591, 1239, 1318, 1658, 1708, 2149
EcoT14I	CCWWGG	4 cut(s)	45, 1016, 1093, 1825
EcoT22I	ATGCAT	2 cut(s)	622, 1637
EcoT38I	GRGCYC	4 cut(s)	1213, 1623, 1752, 2095
ErhI	CCWWGG	4 cut(s)	45, 1016, 1093, 1825
FalI	AAGNNNNNCTT	2 cut(s)	1017, 1049
FaqI	GGGAC	2 cut(s)	369, 1463
FblI	GTMKAC	1 cut(s)	1443
Fnu4HI	GCNGC	7 cut(s)	1380, 1395, 1581, 1940, 1984, 2107, 2147
FokI	GGATG	7 cut(s)	725, 1064, 1165, 1233, 1493, 2052, 2215
FriOI	GRGCYC	4 cut(s)	1213, 1623, 1752, 2095
Fsp4HI	GCNGC	7 cut(s)	1380, 1395, 1581, 1940, 1984, 2107, 2147
FspI	TGCGCA	1 cut(s)	113
GlaI	GCGC	2 cut(s)	113, 176
GluI	GCNGC	7 cut(s)	1380, 1395, 1581, 1940, 1984, 2107, 2147
GsuI	CTGGAG	2 cut(s)	399, 666
HaeII	RGCGCY	1 cut(s)	178
HaeIII	GGCC	5 cut(s)	305, 516, 1488, 1824, 1983
HapII	CCGG	7 cut(s)	458, 928, 1356, 1477, 1689, 2026, 2226
HgaI	GACGC	4 cut(s)	192, 833, 1588, 2071
HhaI	GCGC	2 cut(s)	114, 177
Hin1I	GRCGYC	1 cut(s)	2082
Hin6I	GCGC	2 cut(s)	112, 175
HinP1I	GCGC	2 cut(s)	112, 175
HincII	GTYRAC	2 cut(s)	1203, 2086
HindII	GTYRAC	2 cut(s)	1203, 2086
HpaI	GTTAAC	1 cut(s)	1203
HpaII	CCGG	7 cut(s)	458, 928, 1356, 1477, 1689, 2026, 2226
HphI	GGTGA	7 cut(s)	65, 401, 1115, 1337, 1527, 2020, 2047
Hpy166II	GTNNAC	4 cut(s)	1203, 1444, 1848, 2086
Hpy8I	GTNNAC	4 cut(s)	1203, 1444, 1848, 2086
Hpy99I	CGWCG	2 cut(s)	377, 614
HpyCH4III	ACNGT	5 cut(s)	448, 764, 962, 1531, 2195
HpyCH4IV	ACGT	2 cut(s)	135, 612
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1034, 1043, 1184, 1589, 1873
HpySE526I	ACGT	2 cut(s)	135, 612
Hsp92I	GRCGYC	1 cut(s)	2082
HspAI	GCGC	2 cut(s)	112, 175
KspAI	GTTAAC	1 cut(s)	1203
LguI	GCTCTTC	2 cut(s)	491, 1670
LmnI	GCTCC	4 cut(s)	678, 969, 1747, 2014
Lsp1109I	GCAGC	6 cut(s)	1366, 1381, 1592, 1951, 2118, 2133
LweI	GCATC	7 cut(s)	607, 659, 703, 1187, 1514, 2074, 2093
MaeII	ACGT	2 cut(s)	135, 612
MaeIII	GTNAC	6 cut(s)	95, 343, 407, 775, 821, 897
MflI	RGATCY	3 cut(s)	57, 239, 529
MhlI	GDGCHC	5 cut(s)	1213, 1473, 1623, 1752, 2095
MlsI	TGGCCA	1 cut(s)	1488
MluCI	AATT	8 cut(s)	38, 106, 198, 365, 667, 964, 1079, 2156
MluNI	TGGCCA	1 cut(s)	1488
MlyI	GAGTC	3 cut(s)	26, 263, 905
MmeI	TCCRAC	3 cut(s)	1283, 1759, 2164
Mox20I	TGGCCA	1 cut(s)	1488
Mph1103I	ATGCAT	2 cut(s)	622, 1637
MscI	TGGCCA	1 cut(s)	1488
MseI	TTAA	9 cut(s)	227, 284, 437, 1077, 1086, 1202, 1454, 1812, 1926
MslI	CAYNNNNRTG	3 cut(s)	782, 1630, 1830
Msp20I	TGGCCA	1 cut(s)	1488
MspI	CCGG	7 cut(s)	458, 928, 1356, 1477, 1689, 2026, 2226
Mva1269I	GAATGC	2 cut(s)	1592, 1635
MvaI	CCWGG	7 cut(s)	483, 593, 1241, 1320, 1660, 1710, 2151
MvnI	CGCG	1 cut(s)	1986
MwoI	GCNNNNNNNGC	5 cut(s)	1034, 1043, 1184, 1589, 1873
NciI	CCSGG	4 cut(s)	929, 1356, 1478, 2227
NcoI	CCATGG	2 cut(s)	45, 1825
NlaIV	GGNNCC	8 cut(s)	12, 384, 1141, 1749, 1783, 1962, 2016, 2139
NmuCI	GTSAC	5 cut(s)	95, 407, 775, 821, 897
NsbI	TGCGCA	1 cut(s)	113
NsiI	ATGCAT	2 cut(s)	622, 1637
NspI	RCATGY	3 cut(s)	1432, 1614, 1635
NspV	TTCGAA	1 cut(s)	1571
PaeI	GCATGC	1 cut(s)	1635
PceI	AGGCCT	1 cut(s)	305
PciSI	GCTCTTC	2 cut(s)	491, 1670
PctI	GAATGC	2 cut(s)	1592, 1635
PfeI	GAWTC	9 cut(s)	245, 254, 263, 469, 686, 1290, 1386, 1559, 1950
PfoI	TCCNGGA	2 cut(s)	1239, 1476
PkrI	GCNGC	7 cut(s)	1381, 1396, 1582, 1941, 1985, 2108, 2148
PleI	GAGTC	3 cut(s)	25, 263, 904
PpsI	GAGTC	3 cut(s)	25, 263, 904
PpuMI	RGGWCCY	2 cut(s)	383, 861
Psp5II	RGGWCCY	2 cut(s)	383, 861
Psp6I	CCWGG	7 cut(s)	481, 591, 1239, 1318, 1658, 1708, 2149
PspGI	CCWGG	7 cut(s)	481, 591, 1239, 1318, 1658, 1708, 2149
PspN4I	GGNNCC	8 cut(s)	12, 384, 1141, 1749, 1783, 1962, 2016, 2139
PspPI	GGNCC	4 cut(s)	11, 383, 515, 861
PspPPI	RGGWCCY	2 cut(s)	383, 861
PstNI	CAGNNNCTG	2 cut(s)	422, 689
PsuI	RGATCY	3 cut(s)	57, 239, 529
RsaI	GTAC	6 cut(s)	73, 279, 766, 811, 874, 2124
RsaNI	GTAC	6 cut(s)	72, 278, 765, 810, 873, 2123
RseI	CAYNNNNRTG	3 cut(s)	782, 1630, 1830
SapI	GCTCTTC	2 cut(s)	491, 1670
SaqAI	TTAA	9 cut(s)	227, 284, 437, 1077, 1086, 1202, 1454, 1812, 1926
SatI	GCNGC	7 cut(s)	1380, 1395, 1581, 1940, 1984, 2107, 2147
Sau96I	GGNCC	4 cut(s)	11, 383, 515, 861
ScaI	AGTACT	2 cut(s)	766, 811
SchI	GAGTC	3 cut(s)	26, 263, 905
SduI	GDGCHC	5 cut(s)	1213, 1473, 1623, 1752, 2095
SfaNI	GCATC	7 cut(s)	607, 659, 703, 1187, 1514, 2074, 2093
SfcI	CTRYAG	1 cut(s)	1444
SfuI	TTCGAA	1 cut(s)	1571
SinI	GGWCC	3 cut(s)	11, 383, 861
SmiMI	CAYNNNNRTG	3 cut(s)	782, 1630, 1830
SmlI	CTYRAG	2 cut(s)	258, 1755
SmoI	CTYRAG	2 cut(s)	258, 1755
SpeI	ACTAGT	2 cut(s)	917, 1970
SphI	GCATGC	1 cut(s)	1635
Sse9I	AATT	8 cut(s)	38, 106, 198, 365, 667, 964, 1079, 2156
SseBI	AGGCCT	1 cut(s)	305
SsiI	CCGC	6 cut(s)	638, 746, 1397, 1745, 1984, 2114
SspI	AATATT	1 cut(s)	1313
StuI	AGGCCT	1 cut(s)	305
StyI	CCWWGG	4 cut(s)	45, 1016, 1093, 1825
TaaI	ACNGT	5 cut(s)	448, 764, 962, 1531, 2195
TaiI	ACGT	2 cut(s)	138, 615
TaqI	TCGA	6 cut(s)	372, 525, 1042, 1571, 2101, 2247
TaqII	GACCGA	2 cut(s)	1298, 1752
TasI	AATT	8 cut(s)	38, 106, 198, 365, 667, 964, 1079, 2156
TatI	WGTACW	2 cut(s)	764, 809
TauI	GCSGC	1 cut(s)	1986
TfiI	GAWTC	9 cut(s)	245, 254, 263, 469, 686, 1290, 1386, 1559, 1950
Tru1I	TTAA	9 cut(s)	227, 284, 437, 1077, 1086, 1202, 1454, 1812, 1926
Tru9I	TTAA	9 cut(s)	227, 284, 437, 1077, 1086, 1202, 1454, 1812, 1926
TscAI	CASTG	4 cut(s)	121, 784, 856, 1534
TseFI	GTSAC	5 cut(s)	95, 407, 775, 821, 897
TseI	GCWGC	6 cut(s)	1379, 1394, 1580, 1939, 2106, 2146
Tsp45I	GTSAC	5 cut(s)	95, 407, 775, 821, 897
TspDTI	ATGAA	5 cut(s)	455, 509, 632, 1175, 1803
TspGWI	ACGGA	1 cut(s)	446
TspRI	CASTG	4 cut(s)	121, 784, 856, 1534
VpaK11BI	GGWCC	3 cut(s)	11, 383, 861
XapI	RAATTY	3 cut(s)	38, 106, 2156
XbaI	TCTAGA	1 cut(s)	2239
XceI	RCATGY	3 cut(s)	1432, 1614, 1635
XcmI	CCANNNNNNNNNTGG	1 cut(s)	175
XmaJI	CCTAGG	1 cut(s)	1016
XmiI	GTMKAC	1 cut(s)	1443
ZrmI	AGTACT	2 cut(s)	766, 811
Zsp2I	ATGCAT	2 cut(s)	622, 1637

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.