No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000032417 |
| rosa_roxburghii | Rroxscaffold_1G00030330 Rroxscaffold_4G00283110 Rroxscaffold_5G00366870 Rroxscaffold_5G00366980 |
| rosa_samantha | Rh2AG031100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 111 |
| AciI | CCGC | 1 cut(s) | 102 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 40, 46 |
| AgsI | TTSAA | 1 cut(s) | 149 |
| AluBI | AGCT | 1 cut(s) | 137 |
| AluI | AGCT | 1 cut(s) | 137 |
| AoxI | GGCC | 2 cut(s) | 3, 74 |
| ApeKI | GCWGC | 3 cut(s) | 50, 80, 134 |
| AspS9I | GGNCC | 1 cut(s) | 74 |
| AsuC2I | CCSGG | 1 cut(s) | 41 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbsI | GAAGAC | 1 cut(s) | 104 |
| BbvI | GCAGC | 3 cut(s) | 37, 67, 146 |
| BceAI | ACGGC | 1 cut(s) | 227 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 203, 237 |
| BcnI | CCSGG | 1 cut(s) | 41 |
| BisI | GCNGC | 3 cut(s) | 51, 81, 135 |
| BlsI | GCNGC | 3 cut(s) | 52, 82, 136 |
| Bme1390I | CCNGG | 1 cut(s) | 41 |
| BmgT120I | GGNCC | 1 cut(s) | 74 |
| BmiI | GGNNCC | 1 cut(s) | 75 |
| BmrFI | CCNGG | 1 cut(s) | 41 |
| BmsI | GCATC | 3 cut(s) | 62, 92, 160 |
| BpiI | GAAGAC | 1 cut(s) | 104 |
| BpuMI | CCSGG | 1 cut(s) | 41 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 40, 46 |
| Bse118I | RCCGGY | 1 cut(s) | 76 |
| Bse1I | ACTGG | 1 cut(s) | 254 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 40, 46 |
| BseNI | ACTGG | 1 cut(s) | 254 |
| BseXI | GCAGC | 3 cut(s) | 37, 67, 146 |
| Bsh1236I | CGCG | 1 cut(s) | 111 |
| BshFI | GGCC | 2 cut(s) | 5, 76 |
| BsiSI | CCGG | 2 cut(s) | 41, 77 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 40, 46 |
| BsmI | GAATGC | 1 cut(s) | 219 |
| BsnI | GGCC | 2 cut(s) | 5, 76 |
| BspACI | CCGC | 1 cut(s) | 102 |
| BspANI | GGCC | 2 cut(s) | 5, 76 |
| BspFNI | CGCG | 1 cut(s) | 111 |
| BspLI | GGNNCC | 1 cut(s) | 75 |
| BsrFI | RCCGGY | 1 cut(s) | 76 |
| BsrI | ACTGG | 1 cut(s) | 254 |
| BssAI | RCCGGY | 1 cut(s) | 76 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 140 |
| BstC8I | GCNNGC | 1 cut(s) | 78 |
| BstFNI | CGCG | 1 cut(s) | 111 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 73, 140, 165, 184 |
| BstSCI | CCNGG | 1 cut(s) | 39 |
| BstUI | CGCG | 1 cut(s) | 111 |
| BstV1I | GCAGC | 3 cut(s) | 37, 67, 146 |
| BstV2I | GAAGAC | 1 cut(s) | 104 |
| BsuRI | GGCC | 2 cut(s) | 5, 76 |
| BtgZI | GCGATG | 2 cut(s) | 126, 183 |
| Cac8I | GCNNGC | 1 cut(s) | 78 |
| Cfr10I | RCCGGY | 1 cut(s) | 76 |
| Cfr13I | GGNCC | 1 cut(s) | 74 |
| CviJI | RGCY | 6 cut(s) | 5, 50, 76, 80, 137, 192 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 50, 76, 80, 137, 192 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| FaiI | YATR | 3 cut(s) | 195, 229, 231 |
| Fnu4HI | GCNGC | 3 cut(s) | 51, 81, 135 |
| Fsp4HI | GCNGC | 3 cut(s) | 51, 81, 135 |
| GluI | GCNGC | 3 cut(s) | 51, 81, 135 |
| HaeIII | GGCC | 2 cut(s) | 5, 76 |
| HapII | CCGG | 2 cut(s) | 41, 77 |
| HpaII | CCGG | 2 cut(s) | 41, 77 |
| Hpy188I | TCNGA | 1 cut(s) | 275 |
| Hpy99I | CGWCG | 1 cut(s) | 187 |
| HpyAV | CCTTC | 2 cut(s) | 15, 132 |
| HpyCH4IV | ACGT | 1 cut(s) | 182 |
| HpyCH4V | TGCA | 4 cut(s) | 53, 83, 143, 173 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 73, 140, 165, 184 |
| HpySE526I | ACGT | 1 cut(s) | 182 |
| KroI | GCCGGC | 1 cut(s) | 76 |
| KroNI | GCCGGC | 1 cut(s) | 78 |
| LpnPI | CCDG | 5 cut(s) | 54, 90, 123, 200, 267 |
| Lsp1109I | GCAGC | 3 cut(s) | 37, 67, 146 |
| LweI | GCATC | 3 cut(s) | 62, 92, 160 |
| MaeII | ACGT | 1 cut(s) | 182 |
| MboII | GAAGA | 2 cut(s) | 30, 109 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 2 cut(s) | 144, 265 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MnlI | CCTC | 1 cut(s) | 149 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroNI | GCCGGC | 1 cut(s) | 76 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 1 cut(s) | 243 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 137 |
| MspI | CCGG | 2 cut(s) | 41, 77 |
| MspR9I | CCNGG | 1 cut(s) | 41 |
| Mva1269I | GAATGC | 1 cut(s) | 219 |
| MvnI | CGCG | 1 cut(s) | 111 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 73, 140, 165, 184 |
| NaeI | GCCGGC | 1 cut(s) | 78 |
| NciI | CCSGG | 1 cut(s) | 41 |
| NgoMIV | GCCGGC | 1 cut(s) | 76 |
| NlaIV | GGNNCC | 1 cut(s) | 75 |
| PctI | GAATGC | 1 cut(s) | 219 |
| PdiI | GCCGGC | 1 cut(s) | 78 |
| PfoI | TCCNGGA | 1 cut(s) | 39 |
| PkrI | GCNGC | 3 cut(s) | 52, 82, 136 |
| PspN4I | GGNNCC | 1 cut(s) | 75 |
| PspPI | GGNCC | 1 cut(s) | 74 |
| PvuII | CAGCTG | 1 cut(s) | 137 |
| SaqAI | TTAA | 1 cut(s) | 243 |
| SatI | GCNGC | 3 cut(s) | 51, 81, 135 |
| Sau96I | GGNCC | 1 cut(s) | 74 |
| ScrFI | CCNGG | 1 cut(s) | 41 |
| SetI | ASST | 5 cut(s) | 16, 26, 139, 185, 200 |
| SfaNI | GCATC | 3 cut(s) | 62, 92, 160 |
| Sse9I | AATT | 2 cut(s) | 144, 265 |
| SsiI | CCGC | 1 cut(s) | 102 |
| StyD4I | CCNGG | 1 cut(s) | 39 |
| TaiI | ACGT | 1 cut(s) | 185 |
| TaqI | TCGA | 2 cut(s) | 16, 95 |
| TasI | AATT | 2 cut(s) | 144, 265 |
| Tru1I | TTAA | 1 cut(s) | 243 |
| Tru9I | TTAA | 1 cut(s) | 243 |
| TseI | GCWGC | 3 cut(s) | 50, 80, 134 |
| TspDTI | ATGAA | 1 cut(s) | 16 |