ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0476271 |
| rosa_roxburghii | Rroxscaffold_6G00405430 |
| rosa_samantha | Rh3AG204300 Rh3BG235600 Rh3BG235700 Rh3DG230000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 492 |
| AclWI | GGATC | 2 cut(s) | 92, 383 |
| AcoI | YGGCCR | 1 cut(s) | 210 |
| AcsI | RAATTY | 2 cut(s) | 61, 239 |
| AcuI | CTGAAG | 1 cut(s) | 129 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 72, 419, 492 |
| AgsI | TTSAA | 1 cut(s) | 236 |
| AjnI | CCWGG | 1 cut(s) | 65 |
| Alw26I | GTCTC | 1 cut(s) | 70 |
| AlwI | GGATC | 2 cut(s) | 92, 383 |
| AoxI | GGCC | 1 cut(s) | 210 |
| ApoI | RAATTY | 2 cut(s) | 61, 239 |
| AsuNHI | GCTAGC | 1 cut(s) | 433 |
| BccI | CCATC | 2 cut(s) | 43, 299 |
| BceAI | ACGGC | 1 cut(s) | 225 |
| BciT130I | CCWGG | 1 cut(s) | 67 |
| BcoDI | GTCTC | 1 cut(s) | 70 |
| BfaI | CTAG | 1 cut(s) | 434 |
| BfmI | CTRYAG | 1 cut(s) | 167 |
| Bme1390I | CCNGG | 1 cut(s) | 67 |
| BmrFI | CCNGG | 1 cut(s) | 67 |
| BmsI | GCATC | 2 cut(s) | 109, 265 |
| BmtI | GCTAGC | 1 cut(s) | 437 |
| BsaJI | CCNNGG | 2 cut(s) | 276, 382 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 72, 419, 492 |
| Bse1I | ACTGG | 1 cut(s) | 222 |
| Bse3DI | GCAATG | 1 cut(s) | 444 |
| BseBI | CCWGG | 1 cut(s) | 67 |
| BseDI | CCNNGG | 2 cut(s) | 276, 382 |
| BseGI | GGATG | 2 cut(s) | 178, 343 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 72, 419, 492 |
| BseMI | GCAATG | 1 cut(s) | 444 |
| BseMII | CTCAG | 1 cut(s) | 384 |
| BseNI | ACTGG | 1 cut(s) | 222 |
| BseYI | CCCAGC | 1 cut(s) | 333 |
| BshFI | GGCC | 1 cut(s) | 212 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 72, 419, 492 |
| BsmAI | GTCTC | 1 cut(s) | 70 |
| BsnI | GGCC | 1 cut(s) | 212 |
| Bsp143I | GATC | 2 cut(s) | 97, 388 |
| BspANI | GGCC | 1 cut(s) | 212 |
| BspCNI | CTCAG | 1 cut(s) | 385 |
| BspMAI | CTGCAG | 1 cut(s) | 171 |
| BspOI | GCTAGC | 1 cut(s) | 437 |
| BspPI | GGATC | 2 cut(s) | 92, 383 |
| BsrDI | GCAATG | 1 cut(s) | 444 |
| BsrI | ACTGG | 1 cut(s) | 222 |
| BssECI | CCNNGG | 2 cut(s) | 276, 382 |
| BssMI | GATC | 2 cut(s) | 97, 388 |
| BssT1I | CCWWGG | 1 cut(s) | 382 |
| Bst2UI | CCWGG | 1 cut(s) | 67 |
| Bst4CI | ACNGT | 3 cut(s) | 265, 277, 492 |
| BstC8I | GCNNGC | 1 cut(s) | 435 |
| BstDEI | CTNAG | 1 cut(s) | 393 |
| BstDSI | CCRYGG | 1 cut(s) | 276 |
| BstF5I | GGATG | 2 cut(s) | 178, 343 |
| BstKTI | GATC | 2 cut(s) | 100, 391 |
| BstMAI | GTCTC | 1 cut(s) | 70 |
| BstMBI | GATC | 2 cut(s) | 97, 388 |
| BstNI | CCWGG | 1 cut(s) | 67 |
| BstSCI | CCNGG | 1 cut(s) | 65 |
| BstSFI | CTRYAG | 1 cut(s) | 167 |
| BstX2I | RGATCY | 2 cut(s) | 97, 388 |
| BstYI | RGATCY | 2 cut(s) | 97, 388 |
| BsuRI | GGCC | 1 cut(s) | 212 |
| BtgI | CCRYGG | 1 cut(s) | 276 |
| BtsCI | GGATG | 2 cut(s) | 178, 343 |
| Cac8I | GCNNGC | 1 cut(s) | 435 |
| CviAII | CATG | 2 cut(s) | 403, 419 |
| CviJI | RGCY | 2 cut(s) | 212, 333 |
| CviKI_1 | RGCY | 2 cut(s) | 212, 333 |
| DdeI | CTNAG | 1 cut(s) | 393 |
| DpnI | GATC | 2 cut(s) | 99, 390 |
| DpnII | GATC | 2 cut(s) | 97, 388 |
| EaeI | YGGCCR | 1 cut(s) | 210 |
| Eco130I | CCWWGG | 1 cut(s) | 382 |
| Eco57I | CTGAAG | 1 cut(s) | 129 |
| EcoRII | CCWGG | 1 cut(s) | 65 |
| EcoT14I | CCWWGG | 1 cut(s) | 382 |
| ErhI | CCWWGG | 1 cut(s) | 382 |
| FaeI | CATG | 2 cut(s) | 406, 422 |
| FatI | CATG | 2 cut(s) | 402, 418 |
| FokI | GGATG | 2 cut(s) | 185, 350 |
| FspBI | CTAG | 1 cut(s) | 434 |
| GsaI | CCCAGC | 1 cut(s) | 337 |
| HaeIII | GGCC | 1 cut(s) | 212 |
| Hin1II | CATG | 2 cut(s) | 406, 422 |
| HinfI | GANTC | 3 cut(s) | 38, 86, 378 |
| Hpy188I | TCNGA | 3 cut(s) | 37, 43, 261 |
| Hpy188III | TCNNGA | 1 cut(s) | 392 |
| HpyAV | CCTTC | 1 cut(s) | 66 |
| HpyCH4III | ACNGT | 3 cut(s) | 265, 277, 492 |
| HpyCH4V | TGCA | 5 cut(s) | 122, 169, 248, 418, 449 |
| HpyF3I | CTNAG | 1 cut(s) | 393 |
| Hsp92II | CATG | 2 cut(s) | 406, 422 |
| Kzo9I | GATC | 2 cut(s) | 97, 388 |
| LmnI | GCTCC | 1 cut(s) | 308 |
| LpnPI | CCDG | 6 cut(s) | 52, 79, 155, 203, 319, 405 |
| LweI | GCATC | 2 cut(s) | 109, 265 |
| MaeI | CTAG | 1 cut(s) | 434 |
| MaeIII | GTNAC | 2 cut(s) | 200, 351 |
| MalI | GATC | 2 cut(s) | 99, 390 |
| MboI | GATC | 2 cut(s) | 97, 388 |
| MboII | GAAGA | 3 cut(s) | 135, 248, 401 |
| MflI | RGATCY | 2 cut(s) | 97, 388 |
| MluCI | AATT | 4 cut(s) | 61, 239, 363, 426 |
| MlyI | GAGTC | 2 cut(s) | 47, 80 |
| MmeI | TCCRAC | 1 cut(s) | 66 |
| MnlI | CCTC | 2 cut(s) | 48, 262 |
| MseI | TTAA | 2 cut(s) | 104, 366 |
| MslI | CAYNNNNRTG | 1 cut(s) | 218 |
| MspR9I | CCNGG | 1 cut(s) | 67 |
| MvaI | CCWGG | 1 cut(s) | 67 |
| NdeII | GATC | 2 cut(s) | 97, 388 |
| NheI | GCTAGC | 1 cut(s) | 433 |
| NlaIII | CATG | 2 cut(s) | 406, 422 |
| PfeI | GAWTC | 1 cut(s) | 378 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 492 |
| PfoI | TCCNGGA | 1 cut(s) | 65 |
| PleI | GAGTC | 2 cut(s) | 46, 80 |
| PpsI | GAGTC | 2 cut(s) | 46, 80 |
| Psp6I | CCWGG | 1 cut(s) | 65 |
| PspFI | CCCAGC | 1 cut(s) | 333 |
| PspGI | CCWGG | 1 cut(s) | 65 |
| PstI | CTGCAG | 1 cut(s) | 171 |
| PsuI | RGATCY | 2 cut(s) | 97, 388 |
| RseI | CAYNNNNRTG | 1 cut(s) | 218 |
| SaqAI | TTAA | 2 cut(s) | 104, 366 |
| Sau3AI | GATC | 2 cut(s) | 97, 388 |
| SchI | GAGTC | 2 cut(s) | 47, 80 |
| ScrFI | CCNGG | 1 cut(s) | 67 |
| SfaNI | GCATC | 2 cut(s) | 109, 265 |
| SfcI | CTRYAG | 1 cut(s) | 167 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 218 |
| Sse9I | AATT | 4 cut(s) | 61, 239, 363, 426 |
| SspMI | CTAG | 1 cut(s) | 434 |
| StyD4I | CCNGG | 1 cut(s) | 65 |
| StyI | CCWWGG | 1 cut(s) | 382 |
| TaaI | ACNGT | 3 cut(s) | 265, 277, 492 |
| TasI | AATT | 4 cut(s) | 61, 239, 363, 426 |
| TfiI | GAWTC | 1 cut(s) | 378 |
| Tru1I | TTAA | 2 cut(s) | 104, 366 |
| Tru9I | TTAA | 2 cut(s) | 104, 366 |
| TspDTI | ATGAA | 1 cut(s) | 391 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 492 |
| XapI | RAATTY | 2 cut(s) | 61, 239 |
| XspI | CTAG | 1 cut(s) | 434 |