WEB family protein At5g16730, chloroplastic-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0097341 RchiOBHm_Chr6g0286801 |
| rosa_multiflora | Rmu_ssc0000279.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00181940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 284 |
| AarI | CACCTGC | 1 cut(s) | 398 |
| Acc36I | ACCTGC | 1 cut(s) | 398 |
| AccII | CGCG | 2 cut(s) | 125, 127 |
| AciI | CCGC | 1 cut(s) | 127 |
| AcsI | RAATTY | 1 cut(s) | 269 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 310, 331 |
| AgsI | TTSAA | 3 cut(s) | 256, 269, 359 |
| AluBI | AGCT | 4 cut(s) | 152, 206, 365, 400 |
| AluI | AGCT | 4 cut(s) | 152, 206, 365, 400 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 95 |
| Ama87I | CYCGRG | 1 cut(s) | 153 |
| ApeKI | GCWGC | 7 cut(s) | 31, 51, 71, 86, 95, 165, 404 |
| ApoI | RAATTY | 1 cut(s) | 269 |
| AspLEI | GCGC | 3 cut(s) | 117, 125, 127 |
| AsuHPI | GGTGA | 2 cut(s) | 407, 422 |
| AsuNHI | GCTAGC | 2 cut(s) | 148, 400 |
| AvaI | CYCGRG | 1 cut(s) | 153 |
| BbvI | GCAGC | 7 cut(s) | 43, 58, 63, 82, 98, 152, 416 |
| BfaI | CTAG | 3 cut(s) | 149, 159, 401 |
| BfmI | CTRYAG | 3 cut(s) | 72, 132, 366 |
| BfuAI | ACCTGC | 1 cut(s) | 398 |
| BisI | GCNGC | 7 cut(s) | 32, 52, 72, 87, 96, 166, 405 |
| BlsI | GCNGC | 7 cut(s) | 33, 53, 73, 88, 97, 167, 406 |
| BmeT110I | CYCGRG | 1 cut(s) | 153 |
| BmsI | GCATC | 1 cut(s) | 29 |
| BmtI | GCTAGC | 2 cut(s) | 152, 404 |
| BpmI | CTGGAG | 1 cut(s) | 287 |
| BsaJI | CCNNGG | 1 cut(s) | 384 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 329, 359 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 310, 331 |
| BseDI | CCNNGG | 1 cut(s) | 384 |
| BseGI | GGATG | 1 cut(s) | 44 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 310, 331 |
| BseMII | CTCAG | 1 cut(s) | 216 |
| BsePI | GCGCGC | 1 cut(s) | 123 |
| BseXI | GCAGC | 7 cut(s) | 43, 58, 63, 82, 98, 152, 416 |
| Bsh1236I | CGCG | 2 cut(s) | 125, 127 |
| BsiHKCI | CYCGRG | 1 cut(s) | 153 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 310, 331 |
| BsoBI | CYCGRG | 1 cut(s) | 153 |
| BspACI | CCGC | 1 cut(s) | 127 |
| BspCNI | CTCAG | 1 cut(s) | 217 |
| BspFNI | CGCG | 2 cut(s) | 125, 127 |
| BspMAI | CTGCAG | 1 cut(s) | 76 |
| BspMI | ACCTGC | 1 cut(s) | 398 |
| BspOI | GCTAGC | 2 cut(s) | 152, 404 |
| BssECI | CCNNGG | 1 cut(s) | 384 |
| BssHII | GCGCGC | 1 cut(s) | 123 |
| BssT1I | CCWWGG | 1 cut(s) | 384 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 95 |
| BstC8I | GCNNGC | 7 cut(s) | 56, 113, 125, 129, 150, 381, 402 |
| BstDEI | CTNAG | 2 cut(s) | 225, 239 |
| BstF5I | GGATG | 1 cut(s) | 44 |
| BstFNI | CGCG | 2 cut(s) | 125, 127 |
| BstHHI | GCGC | 3 cut(s) | 117, 125, 127 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 48, 92, 95, 149 |
| BstSFI | CTRYAG | 3 cut(s) | 72, 132, 366 |
| BstUI | CGCG | 2 cut(s) | 125, 127 |
| BstV1I | GCAGC | 7 cut(s) | 43, 58, 63, 82, 98, 152, 416 |
| BtsCI | GGATG | 1 cut(s) | 44 |
| BtsI | GCAGTG | 1 cut(s) | 11 |
| BtsIMutI | CAGTG | 1 cut(s) | 11 |
| BveI | ACCTGC | 1 cut(s) | 398 |
| Cac8I | GCNNGC | 7 cut(s) | 56, 113, 125, 129, 150, 381, 402 |
| CaiI | CAGNNNCTG | 1 cut(s) | 95 |
| CfoI | GCGC | 3 cut(s) | 117, 125, 127 |
| CviAII | CATG | 1 cut(s) | 232 |
| DdeI | CTNAG | 2 cut(s) | 225, 239 |
| Eco130I | CCWWGG | 1 cut(s) | 384 |
| Eco88I | CYCGRG | 1 cut(s) | 153 |
| EcoRI | GAATTC | 1 cut(s) | 269 |
| EcoT14I | CCWWGG | 1 cut(s) | 384 |
| ErhI | CCWWGG | 1 cut(s) | 384 |
| FaeI | CATG | 1 cut(s) | 235 |
| FaiI | YATR | 6 cut(s) | 233, 251, 276, 284, 327, 423 |
| FatI | CATG | 1 cut(s) | 231 |
| FauI | CCCGC | 1 cut(s) | 120 |
| Fnu4HI | GCNGC | 7 cut(s) | 32, 52, 72, 87, 96, 166, 405 |
| FokI | GGATG | 1 cut(s) | 51 |
| Fsp4HI | GCNGC | 7 cut(s) | 32, 52, 72, 87, 96, 166, 405 |
| FspBI | CTAG | 3 cut(s) | 149, 159, 401 |
| GlaI | GCGC | 3 cut(s) | 116, 124, 126 |
| GluI | GCNGC | 7 cut(s) | 32, 52, 72, 87, 96, 166, 405 |
| GsuI | CTGGAG | 1 cut(s) | 287 |
| HhaI | GCGC | 3 cut(s) | 117, 125, 127 |
| Hin1II | CATG | 1 cut(s) | 235 |
| Hin6I | GCGC | 3 cut(s) | 115, 123, 125 |
| HinP1I | GCGC | 3 cut(s) | 115, 123, 125 |
| HphI | GGTGA | 2 cut(s) | 407, 422 |
| Hpy188III | TCNNGA | 1 cut(s) | 304 |
| HpyAV | CCTTC | 2 cut(s) | 133, 325 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 74, 103, 111, 212 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 48, 92, 95, 149 |
| HpyF3I | CTNAG | 2 cut(s) | 225, 239 |
| Hsp92II | CATG | 1 cut(s) | 235 |
| HspAI | GCGC | 3 cut(s) | 115, 123, 125 |
| LmnI | GCTCC | 1 cut(s) | 28 |
| LpnPI | CCDG | 9 cut(s) | 20, 40, 44, 52, 60, 75, 295, 317, 393 |
| Lsp1109I | GCAGC | 7 cut(s) | 43, 58, 63, 82, 98, 152, 416 |
| LweI | GCATC | 1 cut(s) | 29 |
| MaeI | CTAG | 3 cut(s) | 149, 159, 401 |
| MboII | GAAGA | 1 cut(s) | 371 |
| MluCI | AATT | 5 cut(s) | 264, 269, 341, 354, 446 |
| MmeI | TCCRAC | 1 cut(s) | 6 |
| MnlI | CCTC | 4 cut(s) | 72, 289, 307, 331 |
| MvnI | CGCG | 2 cut(s) | 125, 127 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 48, 92, 95, 149 |
| NheI | GCTAGC | 2 cut(s) | 148, 400 |
| NlaIII | CATG | 1 cut(s) | 235 |
| NmeAIII | GCCGAG | 1 cut(s) | 124 |
| PaqCI | CACCTGC | 1 cut(s) | 398 |
| PauI | GCGCGC | 1 cut(s) | 123 |
| PkrI | GCNGC | 7 cut(s) | 33, 53, 73, 88, 97, 167, 406 |
| PsiI | TTATAA | 1 cut(s) | 284 |
| PstI | CTGCAG | 1 cut(s) | 76 |
| PstNI | CAGNNNCTG | 1 cut(s) | 95 |
| PteI | GCGCGC | 1 cut(s) | 123 |
| SatI | GCNGC | 7 cut(s) | 32, 52, 72, 87, 96, 166, 405 |
| SetI | ASST | 7 cut(s) | 109, 154, 208, 336, 367, 402, 412 |
| SfaNI | GCATC | 1 cut(s) | 29 |
| SfcI | CTRYAG | 3 cut(s) | 72, 132, 366 |
| Sse9I | AATT | 5 cut(s) | 264, 269, 341, 354, 446 |
| SsiI | CCGC | 1 cut(s) | 127 |
| SspMI | CTAG | 3 cut(s) | 149, 159, 401 |
| StyI | CCWWGG | 1 cut(s) | 384 |
| TaqI | TCGA | 2 cut(s) | 444, 452 |
| TasI | AATT | 5 cut(s) | 264, 269, 341, 354, 446 |
| TseI | GCWGC | 7 cut(s) | 31, 51, 71, 86, 95, 165, 404 |
| TspDTI | ATGAA | 2 cut(s) | 248, 303 |
| XapI | RAATTY | 1 cut(s) | 269 |
| XspI | CTAG | 3 cut(s) | 149, 159, 401 |