Rorug01G0005300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0017935
Physical Location & Seq
Reverse (-)
1042385 .. 1046130
3746 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0005300.1

Sequence Viewer

Length: 2235 bp
ATGTTTGTTGTATGTGGACTTGCACCGCCATGTATACTAGAATTTTCGTTGATAAAATTGATTGTTTACCGTTTTGTGGTGTGGAAAGAGCATTACGACGCGGCGTTGGCAAAAGTTACAGCGACGTGCTCAGGTGCACATCCTCTACAGCTACGGCAGGAACCCATCCGTCCAGCCCAGTTCATAATGTGGAGGTTCAAGCCTTTTATGCACAAGGAGCCAGCTGGCCTCGAAGGCCGCTCCATTGACGTCGGAACTCTCAAGATTCAGGTGAAGAATGTCATTGCCGAAGGAGGGTTCTCTTGCGTTTACTTAGCTCGGGACCTTGTCCACACCTCAAAGCAGTATGCTTTGAAGCACATCATATGTAATGACGAAGAGTTGCTGGAGTTGGTGATGAAGGAAATCTCCGTCATGAAGGTACTCAGAGGGCATCCCAATGTTGTCACTCTCTATGCCCACGCCATCATGGATTTGGGCCGCACAAAGGAGGCACTCATTGTCATGGAATATTGTGACAAGTCTCTGGTTACCGTACTCGATAGCAGAGGTGCTGGGTTTTTTGATGAGAAACAGGTCCTTGCAGTCTTCAGAGATGTGTGTACTGCAGTTTTTGCAATGCACACACTGTCTCCTCCCATTGCTCATAGGGATTTGAAAGCTGAGAATCTTCTGTTGGGGCCGGATGGACTGTGGAAATTGTGTGATTTTGGAAGCACCTCTACCAACCACAAGCGCTTTGAGAAGCCTGAAGAAATGGGTATTGAAGAAGACATTATCAGAAAGCACACAACACCTGCCTACAGGGCCCCTGAGATGTGGGATCTATTTCGGAGAGAACTTATCAATGAGAAAGTAGACATATGGGCTCTTGGCTGCCTTCTCTTTCGCATTTGCTACTTCAAAAGTGCATTCGATGGAGAGTCAAAGCTGCAGATCTTGAATGGAAACTATCGCATTCCTGAGTTACCTAAATACGGCTCGGCGATTACAGATCTCATCAGAGACATGCTTCAGGCATCACCAGACGACAGACCAGATATCACGCAGGTGTGGTTTCGTGTTAATGAGTTGTTACCAGTTGGTTTACAGAAGTCTTTACCTGATAGGCCACCTGAAATGCACTCTGCTGGAAAACATGAAGGTTTTTCAAGGCCCGCAAACAAGTCGCCTGAAATGCCTCGTAGAAGCCCACCCCCACCACCTTCAGTGGGAGAATCAGCTAGAAATCCATCACAACCGTCAAATATGTCCAAGGCAGGGGGAGGTGGAGGGCCACTTGGTGCATTCTGGTCCACTCAGCATGCTGAGGATTCAGTTGTTGCTGAAGAAAAGGCTGTACCTAAGTTTGATGATTCTAATCATCCTTTACCCAAGAACAGTGCCCCTGCAAAAGTGGAAAATACACCAACCTATGCTGCACGAAGAAACTCACACGTGAAATCGCACAAGCATGAAGATGGATTTCCAAAGGACATTGAAATAAATTTCTTCCAGAAGGATACTGACCATGGTGCTGAGAGGCCAAAGGCATCCAAGCCTGAGAGTGCAACTAGTTTTCACGATGATGCATTTAACTCGTTTGTTGCTGAATTTGATACTAATAAACTCAGCGTGGGAGCTAGTAATAGCAAATCAGGAAAAGAAGGAGCATTAGAGACTGAAGTAGAGAGATTGAAGGAGCAGCTGAACCAAGCCAACATAGAAAAGGCTGAAATAACTTCCAAATTTGAAAAGCTATCAGCCATCTGCCGATCTCAAAGGCAAGAGTTGCAGGAGCTTAAGCAGACGCTTGCCGCTAGAACACCTTCACCGAATAAAGATGCTTTGAGAAATCAAATGTCACCTGGCATTCAGTCATCTGCAACCCCACCGCAGAGGGAGAAGATAGAAGGAGCCATTTGGGAACTCCAGCAGGATAAATCTGACCGGAAAACTCCGAGTCCAGAGACAAAGTCATGGCAGCCATTTGCAGAACCGCAGCCTTCTTCAACGGACAACACTGTCAAATCTGTCAGGACAAGAAATGGTCACCAGAACAAGCAAGCTACGACTCAAGTAAATACTGGTTTTGACTCGTGGGGTTTTGGAACAGAGAGCTTTTCTGCTGCGCCCACTGGAAGCACCCAAATATCAAGACCTATGGGTGAAGGAAATATTTCTCAGCGTTTTGGTGACACAAAGGCTATGGAGAGCAAGCCAGCTTCTCAACCTGCTGGATGGGCTGGTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020 GO:0031224 GO:0031225 GO:0044425
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

744

Amino Acids

82.86

Weight (kDa)

7.31

Isoelectric Point (pI)

52.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 89 - 351 2.2e-24 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 90 - 351 9.7e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017935)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41905 AT3G57690
malus_domestica MD02G1314100.v1.1
prunus_persica Prupe.2G010700_v2.0.a1 Prupe.6G023400_v2.0.a1
pyrus_communis pycom07g00660
rosa_chinensis RchiOBHm_Chr1g0315711
rosa_roxburghii Rroxscaffold_4G00331520
rosa_rugosa Rorug01G0005300
rosa_samantha Rh1AG016000
rosa_wichuraiana Rw1G000940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 805, 1039
AasI GACNNNNNNGTC 1 cut(s) 2003
AatII GACGTC 1 cut(s) 252
Acc36I ACCTGC 3 cut(s) 805, 1039, 2221
AccBSI CCGCTC 1 cut(s) 240
AccI GTMKAC 2 cut(s) 34, 858
AccII CGCG 1 cut(s) 101
AciI CCGC 8 cut(s) 26, 101, 238, 481, 1158, 1797, 1874, 1979
AclWI GGATC 1 cut(s) 831
AcsI RAATTY 4 cut(s) 41, 1486, 1592, 1727
AcuI CTGAAG 6 cut(s) 574, 771, 998, 1191, 1347, 1683
AcvI CACGTG 1 cut(s) 1438
AcyI GRCGYC 1 cut(s) 249
AdeI CACNNNGTG 1 cut(s) 1283
AfaI GTAC 4 cut(s) 423, 537, 604, 1341
AfeI AGCGCT 1 cut(s) 737
AfiI CCNNNNNNNGG 6 cut(s) 76, 294, 487, 977, 1211, 1260
AflII CTTAAG 1 cut(s) 1781
AflIII ACRYGT 1 cut(s) 1435
AhlI ACTAGT 1 cut(s) 1553
AjiI CACGTC 1 cut(s) 126
AjnI CCWGG 1 cut(s) 1846
AjuI GAANNNNNNNTTGG 2 cut(s) 659, 691
AleI CACNNNNGTG 1 cut(s) 1049
Alw21I GWGCWC 2 cut(s) 131, 139
Alw26I GTCTC 5 cut(s) 528, 636, 999, 1652, 1943
Alw44I GTGCAC 1 cut(s) 135
AlwI GGATC 1 cut(s) 831
Ama87I CYCGRG 1 cut(s) 318
Aor51HI AGCGCT 1 cut(s) 737
AoxI GGCC 9 cut(s) 226, 235, 478, 680, 807, 1109, 1154, 1274, 1523
ApaI GGGCCC 1 cut(s) 811
ApaLI GTGCAC 1 cut(s) 135
ApeKI GCWGC 7 cut(s) 876, 931, 1418, 1684, 1963, 1981, 2108
ApoI RAATTY 4 cut(s) 41, 1486, 1592, 1727
Asp700I GAANNNNTTC 2 cut(s) 1807, 2158
AspLEI GCGC 2 cut(s) 738, 2113
AspS9I GGNCC 9 cut(s) 322, 478, 577, 680, 807, 808, 1155, 1274, 1293
AsuHPI GGTGA 8 cut(s) 283, 406, 1014, 1803, 1836, 2024, 2159, 2186
AvaI CYCGRG 1 cut(s) 318
AvaII GGWCC 3 cut(s) 322, 577, 1293
BaeGI GKGCMC 3 cut(s) 139, 811, 1387
BanII GRGCYC 2 cut(s) 811, 871
BarI GAAGNNNNNNTAC 2 cut(s) 706, 738
BauI CACGAG 1 cut(s) 2077
BbrPI CACGTG 1 cut(s) 1438
BbsI GAAGAC 2 cut(s) 580, 777
Bbv12I GWGCWC 2 cut(s) 131, 139
BbvCI CCTCAGC 1 cut(s) 1308
BbvI GCAGC 7 cut(s) 863, 918, 1405, 1696, 1975, 1993, 2095
BccI CCATC 8 cut(s) 173, 473, 680, 911, 1240, 1454, 1754, 2214
BceAI ACGGC 2 cut(s) 170, 994
BcgI CGANNNNNNTGC 4 cut(s) 1149, 1183, 1560, 1594
BciT130I CCWGG 1 cut(s) 1848
BciVI GTATCC 1 cut(s) 1495
BcoDI GTCTC 5 cut(s) 528, 636, 999, 1652, 1943
BcuI ACTAGT 1 cut(s) 1553
BfaI CTAG 5 cut(s) 38, 1224, 1554, 1623, 1800
BfmI CTRYAG 4 cut(s) 146, 606, 802, 932
BfoI RGCGCY 1 cut(s) 739
BfrI CTTAAG 1 cut(s) 1781
BfuAI ACCTGC 3 cut(s) 805, 1039, 2221
BfuI GTATCC 1 cut(s) 1495
BglI GCCNNNNNGGC 2 cut(s) 234, 806
BglII AGATCT 2 cut(s) 936, 994
Bme1390I CCNGG 1 cut(s) 1848
Bme18I GGWCC 3 cut(s) 322, 577, 1293
BmeT110I CYCGRG 1 cut(s) 318
BmgBI CACGTC 1 cut(s) 126
BmgT120I GGNCC 9 cut(s) 322, 478, 577, 680, 807, 808, 1155, 1274, 1293
BmiI GGNNCC 7 cut(s) 162, 219, 323, 681, 809, 810, 1897
BmrFI CCNGG 1 cut(s) 1848
BmrI ACTGGG 1 cut(s) 172
BmsI GCATC 5 cut(s) 442, 1028, 1541, 1558, 1813
BmuI ACTGGG 1 cut(s) 172
BpiI GAAGAC 2 cut(s) 580, 777
BpmI CTGGAG 2 cut(s) 407, 1895
Bpu10I CCTNAGC 2 cut(s) 130, 1308
BpuEI CTTGAG 2 cut(s) 245, 2040
BsaAI YACGTR 1 cut(s) 1438
BsaBI GATNNNNATC 1 cut(s) 1359
BsaHI GRCGYC 1 cut(s) 249
BsaJI CCNNGG 2 cut(s) 1254, 1510
BsaWI WCCGGW 1 cut(s) 1929
BsaXI ACNNNNNCTCC 2 cut(s) 616, 646
Bsc4I CCNNNNNNNGG 6 cut(s) 76, 294, 487, 977, 1211, 1260
Bse1I ACTGG 4 cut(s) 178, 1079, 2071, 2122
Bse3DI GCAATG 3 cut(s) 282, 624, 639
Bse8I GATNNNNATC 1 cut(s) 1359
BseBI CCWGG 1 cut(s) 1848
BseDI CCNNGG 2 cut(s) 1254, 1510
BseGI GGATG 7 cut(s) 139, 165, 433, 691, 1363, 1532, 2225
BseJI GATNNNNATC 1 cut(s) 1359
BseLI CCNNNNNNNGG 6 cut(s) 76, 294, 487, 977, 1211, 1260
BseMI GCAATG 3 cut(s) 282, 624, 639
BseNI ACTGG 4 cut(s) 178, 1079, 2071, 2122
BseRI GAGGAG 1 cut(s) 624
BseSI GKGCMC 3 cut(s) 139, 811, 1387
BseXI GCAGC 7 cut(s) 863, 918, 1405, 1696, 1975, 1993, 2095
BseYI CCCAGC 1 cut(s) 554
BsgI GTGCAG 1 cut(s) 1404
Bsh1236I CGCG 1 cut(s) 101
BshFI GGCC 9 cut(s) 228, 237, 480, 682, 809, 1111, 1156, 1276, 1525
BsiHKAI GWGCWC 2 cut(s) 131, 139
BsiHKCI CYCGRG 1 cut(s) 318
BsiSI CCGG 2 cut(s) 683, 1930
BslFI GGGAC 1 cut(s) 335
BslI CCNNNNNNNGG 6 cut(s) 76, 294, 487, 977, 1211, 1260
BsmAI GTCTC 5 cut(s) 528, 636, 999, 1652, 1943
BsmFI GGGAC 1 cut(s) 335
BsmI GAATGC 4 cut(s) 911, 957, 1286, 1851
BsnI GGCC 9 cut(s) 228, 237, 480, 682, 809, 1111, 1156, 1276, 1525
BsoBI CYCGRG 1 cut(s) 318
Bsp120I GGGCCC 1 cut(s) 807
Bsp1286I GDGCHC 5 cut(s) 131, 139, 811, 871, 1387
Bsp143I GATC 4 cut(s) 823, 936, 994, 1754
Bsp19I CCATGG 1 cut(s) 1510
BspACI CCGC 8 cut(s) 26, 101, 238, 481, 1158, 1797, 1874, 1979
BspANI GGCC 9 cut(s) 228, 237, 480, 682, 809, 1111, 1156, 1276, 1525
BspFNI CGCG 1 cut(s) 101
BspHI TCATGA 1 cut(s) 414
BspLI GGNNCC 7 cut(s) 162, 219, 323, 681, 809, 810, 1897
BspMAI CTGCAG 2 cut(s) 610, 936
BspMI ACCTGC 3 cut(s) 805, 1039, 2221
BspPI GGATC 1 cut(s) 831
BspTI CTTAAG 1 cut(s) 1781
BsrBI CCGCTC 1 cut(s) 240
BsrDI GCAATG 3 cut(s) 282, 624, 639
BsrI ACTGG 4 cut(s) 178, 1079, 2071, 2122
BssECI CCNNGG 2 cut(s) 1254, 1510
BssMI GATC 4 cut(s) 823, 936, 994, 1754
BssNAI GTATAC 1 cut(s) 35
BssNI GRCGYC 1 cut(s) 249
BssSI CACGAG 1 cut(s) 2077
BssT1I CCWWGG 2 cut(s) 1254, 1510
Bst1107I GTATAC 1 cut(s) 35
Bst2BI CACGAG 1 cut(s) 2077
Bst2UI CCWGG 1 cut(s) 1848
Bst4CI ACNGT 7 cut(s) 71, 535, 630, 693, 1242, 1382, 2005
Bst6I CTCTTC 1 cut(s) 372
BstACI GRCGYC 1 cut(s) 249
BstAFI CTTAAG 1 cut(s) 1781
BstAPI GCANNNNNTGC 2 cut(s) 614, 1771
BstBAI YACGTR 1 cut(s) 1438
BstC8I GCNNGC 8 cut(s) 222, 226, 1158, 1305, 1794, 2046, 2198, 2202
BstDSI CCRYGG 1 cut(s) 1510
BstEII GGTNACC 2 cut(s) 529, 2030
BstF5I GGATG 7 cut(s) 139, 165, 433, 691, 1363, 1532, 2225
BstFNI CGCG 1 cut(s) 101
BstH2I RGCGCY 1 cut(s) 739
BstHHI GCGC 2 cut(s) 738, 2113
BstKTI GATC 4 cut(s) 826, 939, 997, 1757
BstMAI GTCTC 5 cut(s) 528, 636, 999, 1652, 1943
BstMBI GATC 4 cut(s) 823, 936, 994, 1754
BstMWI GCNNNNNNNGC 9 cut(s) 107, 208, 217, 234, 614, 806, 1177, 1771, 2222
BstNI CCWGG 1 cut(s) 1848
BstNSI RCATGY 2 cut(s) 1012, 1307
BstPI GGTNACC 2 cut(s) 529, 2030
BstSCI CCNGG 1 cut(s) 1846
BstSFI CTRYAG 4 cut(s) 146, 606, 802, 932
BstSLI GKGCMC 3 cut(s) 139, 811, 1387
BstUI CGCG 1 cut(s) 101
BstV1I GCAGC 7 cut(s) 863, 918, 1405, 1696, 1975, 1993, 2095
BstV2I GAAGAC 2 cut(s) 580, 777
BstX2I RGATCY 3 cut(s) 823, 936, 994
BstYI RGATCY 3 cut(s) 823, 936, 994
BstZ17I GTATAC 1 cut(s) 35
BsuI GTATCC 1 cut(s) 1495
BsuRI GGCC 9 cut(s) 228, 237, 480, 682, 809, 1111, 1156, 1276, 1525
BtgI CCRYGG 1 cut(s) 1510
BtrI CACGTC 1 cut(s) 126
BtsCI GGATG 7 cut(s) 139, 165, 433, 691, 1363, 1532, 2225
BtsIMutI CAGTG 5 cut(s) 626, 1215, 1387, 2001, 2115
BveI ACCTGC 3 cut(s) 805, 1039, 2221
Cac8I GCNNGC 8 cut(s) 222, 226, 1158, 1305, 1794, 2046, 2198, 2202
CciI TCATGA 1 cut(s) 414
CfoI GCGC 2 cut(s) 738, 2113
Cfr13I GGNCC 9 cut(s) 322, 478, 577, 680, 807, 808, 1155, 1274, 1293
CseI GACGC 2 cut(s) 107, 1798
Csp6I GTAC 4 cut(s) 422, 536, 603, 1340
CviQI GTAC 4 cut(s) 422, 536, 603, 1340
DpnI GATC 4 cut(s) 825, 938, 996, 1756
DpnII GATC 4 cut(s) 823, 936, 994, 1754
DraIII CACNNNGTG 1 cut(s) 1283
DrdI GACNNNNNNGTC 1 cut(s) 2003
DseDI GACNNNNNNGTC 1 cut(s) 2003
Eam1104I CTCTTC 1 cut(s) 372
EarI CTCTTC 1 cut(s) 372
Eco130I CCWWGG 2 cut(s) 1254, 1510
Eco24I GRGCYC 2 cut(s) 811, 871
Eco32I GATATC 1 cut(s) 1042
Eco47I GGWCC 3 cut(s) 322, 577, 1293
Eco47III AGCGCT 1 cut(s) 737
Eco57I CTGAAG 6 cut(s) 574, 771, 998, 1191, 1347, 1683
Eco72I CACGTG 1 cut(s) 1438
Eco88I CYCGRG 1 cut(s) 318
Eco91I GGTNACC 2 cut(s) 529, 2030
EcoO109I RGGNCCY 4 cut(s) 322, 577, 807, 808
EcoO65I GGTNACC 2 cut(s) 529, 2030
EcoRII CCWGG 1 cut(s) 1846
EcoRV GATATC 1 cut(s) 1042
EcoT14I CCWWGG 2 cut(s) 1254, 1510
EcoT22I ATGCAT 1 cut(s) 1573
EcoT38I GRGCYC 2 cut(s) 811, 871
ErhI CCWWGG 2 cut(s) 1254, 1510
FaqI GGGAC 1 cut(s) 335
FauI CCCGC 1 cut(s) 1165
FauNDI CATATG 2 cut(s) 365, 863
FblI GTMKAC 2 cut(s) 34, 858
FokI GGATG 6 cut(s) 126, 152, 420, 698, 1350, 1519
FriOI GRGCYC 2 cut(s) 811, 871
FspBI CTAG 5 cut(s) 38, 1224, 1554, 1623, 1800
GlaI GCGC 2 cut(s) 737, 2112
GsaI CCCAGC 1 cut(s) 558
GsuI CTGGAG 2 cut(s) 407, 1895
HaeII RGCGCY 1 cut(s) 739
HaeIII GGCC 9 cut(s) 228, 237, 480, 682, 809, 1111, 1156, 1276, 1525
HapII CCGG 2 cut(s) 683, 1930
HgaI GACGC 2 cut(s) 107, 1798
HhaI GCGC 2 cut(s) 738, 2113
Hin1I GRCGYC 1 cut(s) 249
Hin6I GCGC 2 cut(s) 736, 2111
HinP1I GCGC 2 cut(s) 736, 2111
HinfI GANTC 9 cut(s) 265, 667, 923, 1217, 1313, 1355, 1942, 2053, 2075
HpaII CCGG 2 cut(s) 683, 1930
HphI GGTGA 8 cut(s) 283, 406, 1014, 1803, 1836, 2024, 2159, 2186
Hpy188I TCNGA 8 cut(s) 254, 428, 593, 782, 834, 1004, 1927, 1941
Hpy99I CGWCG 3 cut(s) 101, 127, 254
HpyCH4III ACNGT 7 cut(s) 71, 535, 630, 693, 1242, 1382, 2005
HpyCH4IV ACGT 3 cut(s) 125, 249, 1437
HpyF10VI GCNNNNNNNGC 9 cut(s) 107, 208, 217, 234, 614, 806, 1177, 1771, 2222
HpySE526I ACGT 3 cut(s) 125, 249, 1437
Hsp92I GRCGYC 1 cut(s) 249
HspAI GCGC 2 cut(s) 736, 2111
Kzo9I GATC 4 cut(s) 823, 936, 994, 1754
LmnI GCTCC 7 cut(s) 217, 245, 1619, 1649, 1681, 1777, 1895
Lsp1109I GCAGC 7 cut(s) 863, 918, 1405, 1696, 1975, 1993, 2095
LweI GCATC 5 cut(s) 442, 1028, 1541, 1558, 1813
MaeI CTAG 5 cut(s) 38, 1224, 1554, 1623, 1800
MaeII ACGT 3 cut(s) 125, 249, 1437
MaeIII GTNAC 9 cut(s) 115, 445, 515, 529, 966, 1074, 1842, 2030, 2174
MalI GATC 4 cut(s) 825, 938, 996, 1756
MbiI CCGCTC 1 cut(s) 240
MboI GATC 4 cut(s) 823, 936, 994, 1754
MflI RGATCY 3 cut(s) 823, 936, 994
MhlI GDGCHC 5 cut(s) 131, 139, 811, 871, 1387
MluCI AATT 6 cut(s) 41, 56, 698, 1486, 1592, 1727
MlyI GAGTC 4 cut(s) 932, 1951, 2047, 2069
MmeI TCCRAC 1 cut(s) 232
Mph1103I ATGCAT 1 cut(s) 1573
MroXI GAANNNNTTC 2 cut(s) 1807, 2158
MseI TTAA 3 cut(s) 1065, 1575, 1782
MslI CAYNNNNRTG 7 cut(s) 28, 438, 503, 1049, 1452, 1458, 1566
MspA1I CMGCKG 2 cut(s) 224, 1687
MspCI CTTAAG 1 cut(s) 1781
MspI CCGG 2 cut(s) 683, 1930
MspR9I CCNGG 1 cut(s) 1848
Mva1269I GAATGC 4 cut(s) 911, 957, 1286, 1851
MvaI CCWGG 1 cut(s) 1848
MvnI CGCG 1 cut(s) 101
MwoI GCNNNNNNNGC 9 cut(s) 107, 208, 217, 234, 614, 806, 1177, 1771, 2222
NcoI CCATGG 1 cut(s) 1510
NdeI CATATG 2 cut(s) 365, 863
NdeII GATC 4 cut(s) 823, 936, 994, 1754
NlaIV GGNNCC 7 cut(s) 162, 219, 323, 681, 809, 810, 1897
NmeAIII GCCGAG 1 cut(s) 962
NmuCI GTSAC 5 cut(s) 445, 515, 1842, 2030, 2174
NsiI ATGCAT 1 cut(s) 1573
NspI RCATGY 2 cut(s) 1012, 1307
OliI CACNNNNGTG 1 cut(s) 1049
PaeI GCATGC 1 cut(s) 1307
PagI TCATGA 1 cut(s) 414
PaqCI CACCTGC 2 cut(s) 805, 1039
PctI GAATGC 4 cut(s) 911, 957, 1286, 1851
PdmI GAANNNNTTC 2 cut(s) 1807, 2158
PfeI GAWTC 5 cut(s) 265, 667, 1217, 1313, 1355
PflFI GACNNNGTC 2 cut(s) 326, 1954
PleI GAGTC 4 cut(s) 931, 1950, 2047, 2069
PmaCI CACGTG 1 cut(s) 1438
PmlI CACGTG 1 cut(s) 1438
PpsI GAGTC 4 cut(s) 931, 1950, 2047, 2069
Ppu21I YACGTR 1 cut(s) 1438
PpuMI RGGWCCY 2 cut(s) 322, 577
Psp5II RGGWCCY 2 cut(s) 322, 577
Psp6I CCWGG 1 cut(s) 1846
PspCI CACGTG 1 cut(s) 1438
PspEI GGTNACC 2 cut(s) 529, 2030
PspFI CCCAGC 1 cut(s) 554
PspGI CCWGG 1 cut(s) 1846
PspN4I GGNNCC 7 cut(s) 162, 219, 323, 681, 809, 810, 1897
PspOMI GGGCCC 1 cut(s) 807
PspPI GGNCC 9 cut(s) 322, 478, 577, 680, 807, 808, 1155, 1274, 1293
PspPPI RGGWCCY 2 cut(s) 322, 577
PstI CTGCAG 2 cut(s) 610, 936
PsuI RGATCY 3 cut(s) 823, 936, 994
PsyI GACNNNGTC 2 cut(s) 326, 1954
PvuII CAGCTG 2 cut(s) 224, 1687
RsaI GTAC 4 cut(s) 423, 537, 604, 1341
RsaNI GTAC 4 cut(s) 422, 536, 603, 1340
RseI CAYNNNNRTG 7 cut(s) 28, 438, 503, 1049, 1452, 1458, 1566
SaqAI TTAA 3 cut(s) 1065, 1575, 1782
Sau3AI GATC 4 cut(s) 823, 936, 994, 1754
Sau96I GGNCC 9 cut(s) 322, 478, 577, 680, 807, 808, 1155, 1274, 1293
SchI GAGTC 4 cut(s) 932, 1951, 2047, 2069
ScrFI CCNGG 1 cut(s) 1848
SduI GDGCHC 5 cut(s) 131, 139, 811, 871, 1387
SfaNI GCATC 5 cut(s) 442, 1028, 1541, 1558, 1813
SfcI CTRYAG 4 cut(s) 146, 606, 802, 932
SfiI GGCCNNNNNGGCC 1 cut(s) 234
SinI GGWCC 3 cut(s) 322, 577, 1293
SmiMI CAYNNNNRTG 7 cut(s) 28, 438, 503, 1049, 1452, 1458, 1566
SmlI CTYRAG 3 cut(s) 260, 1781, 2055
SmoI CTYRAG 3 cut(s) 260, 1781, 2055
SpeI ACTAGT 1 cut(s) 1553
SphI GCATGC 1 cut(s) 1307
Sse9I AATT 6 cut(s) 41, 56, 698, 1486, 1592, 1727
SsiI CCGC 8 cut(s) 26, 101, 238, 481, 1158, 1797, 1874, 1979
SspI AATATT 2 cut(s) 512, 2158
SspMI CTAG 5 cut(s) 38, 1224, 1554, 1623, 1800
StyD4I CCNGG 1 cut(s) 1846
StyI CCWWGG 2 cut(s) 1254, 1510
TaaI ACNGT 7 cut(s) 71, 535, 630, 693, 1242, 1382, 2005
TaiI ACGT 3 cut(s) 128, 252, 1440
TaqI TCGA 3 cut(s) 231, 540, 915
TasI AATT 6 cut(s) 41, 56, 698, 1486, 1592, 1727
TatI WGTACW 1 cut(s) 602
TauI GCSGC 4 cut(s) 104, 240, 483, 1799
TfiI GAWTC 5 cut(s) 265, 667, 1217, 1313, 1355
Tru1I TTAA 3 cut(s) 1065, 1575, 1782
Tru9I TTAA 3 cut(s) 1065, 1575, 1782
TscAI CASTG 5 cut(s) 633, 1215, 1387, 2008, 2122
TseFI GTSAC 5 cut(s) 445, 515, 1842, 2030, 2174
TseI GCWGC 7 cut(s) 876, 931, 1418, 1684, 1963, 1981, 2108
Tsp45I GTSAC 5 cut(s) 445, 515, 1842, 2030, 2174
TspDTI ATGAA 5 cut(s) 172, 413, 431, 1155, 1470
TspGWI ACGGA 3 cut(s) 158, 400, 2009
TspRI CASTG 5 cut(s) 633, 1215, 1387, 2008, 2122
Tth111I GACNNNGTC 2 cut(s) 326, 1954
Vha464I CTTAAG 1 cut(s) 1781
VneI GTGCAC 1 cut(s) 135
VpaK11BI GGWCC 3 cut(s) 322, 577, 1293
XapI RAATTY 4 cut(s) 41, 1486, 1592, 1727
XceI RCATGY 2 cut(s) 1012, 1307
XcmI CCANNNNNNNNNTGG 1 cut(s) 472
XmiI GTMKAC 2 cut(s) 34, 858
XmnI GAANNNNTTC 2 cut(s) 1807, 2158
XspI CTAG 5 cut(s) 38, 1224, 1554, 1623, 1800
ZraI GACGTC 1 cut(s) 250
Zsp2I ATGCAT 1 cut(s) 1573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.