Rorug01G0041000

DNA repair protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0018152
Physical Location & Seq
Forward (+)
6721917 .. 6725549
3633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0041000.1

Sequence Viewer

Length: 1689 bp
ATGCTGCGAACCATCTCTATCTCCCGGGCTCCTCTGAGGTCCCTCTTCCAAAACCGAGCTCATCATTGTTCAATCCCAAACCAAACCGCATCACCACCGTCCGCCTCTTCCAGTTTGATCTCCTATTCTCTTTACTCGACGTCAGCAAAGCAGGAGAAGGAGGACAGAAATGAGGTCGTTTCGCTTTTCAACAGAGACCCAGCTGCCCCTCCGAGGCTCTTTGTGGTCCAGCCCCGGCTTCGTCCCGATTCTATCTTGCACGCTAAGCTCAACGAAGCTCTCAGCCTCGCCAACTCTCTTGAAGAACAGCGAAATGGTTGCTTCGAAAACAATTTGTGCGATAAGGAAACACCACCGCACGTTGTTGTTCAAAACCCAATAGTGAGGCACCAAACTCGTGCAGATACATATTTTGGAAAAGGAACTTTGGAAGCTAGAGTGTTGGGCAAACCAGTCTTGGACCGTGTGGGTCTTATAATAGAGATTTTCAATGCTCATGCTTGCACAAAGGAGGGAAAGCTTCAGGCCGGGTTAGCAGCACTAATGTATAAGAAAACAAGACTTATACGAACGCGTGGTCCAAGTGGACGCTTAGGTTTTGGAATGGGTGGAGAAGCCGAAGTTGTTAGCGCCCGAGGGAGAGGAAATGCTGGAGCTGGATTCATTAGTGGGGCAGGAGAAACTGAACTTCAACTTCAACGACGAAGAATTTTAGAAAGGAGGAGTAGGCTGCTACAACAAATTAAGGATGTTCGTCGTACTCGAGCTGTGCAACGTGCTTCTCGCAAGAGGCATGGAAGCTCTGGTCAAGGCTTAGCTACTGTTGCTGTTGTGGGGTATACAAATGCTGGGAAATCTACATTGGTGAGTGCCCTCTCACATAGTGATCTCTACAGTGATTCTCGATTGTTTGCAACAGTTGACCCTAGATTGAGAAGTGTACTTCTTCCTTCAGGGAGGAAAGTGCTTGTTAGCGATACGGTAGGATTTATTTCAGATTTGCCAGTGCAGTTAGTGGAAGCTTTTCATGCGACTTTAGAAGAAGTTGTGGAGGCTGATCTGCTTGTGCATGTGTTGGATTGCACTGCTCCTAATCTTGAGGAGCACCGATCAACGGTGTTACATGTTCTTGAGCAAATCGGCGTATCCAAGGAGAAGCTTGAGAATATGATTGAAGTTTGGAATAAGATTGACAGTGAGGGAGAGGATATGGGAATGGATGTTAATGAATCTCTTGATGATGGTGAAGATGGTGAGGTGAGCAGCCTCTCAGGAGAAGATGATGATGTGGAGTCTGAGCTGTCAACAGGAGCAGCAAACTGTAGGGCTGATGATCCTTTGTCTGAGCTGTCAGCAGAGAATCCCGAAGCCATGGATGACCAAGAACTCGATTCAGAAGATAACCAAGATCATGGGGGTGAAGAAGGTAGTTTCAGCATGGGCCCTAAGACTCTGAATGACCAACAAAGGGAGTACCCTAAGGACTGGGCAGTGGAAAAGCAATTGCAATCACGAGCTCCATCTGGTCCACATGTTAGAACTTCTGCCATAACAGGAGTTGGCTTGCAAGAGTTGTTAGAGCTCATTGATGAGAAACTGAAAGTCCCAAATGTTCTGGAAAAGGGTGTATTTGATCGAAAATGGAGGCCCTCTCGTACAGAGGAGGCGGGTCTAGCAGTTGAACAATGA

Protein Analysis

562

Amino Acids

61.68

Weight (kDa)

5.49

Isoelectric Point (pI)

45.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP-bdg_M PF16360 166 - 262 2.2e-12 GTP-binding GTPase Middle Region
MMR_HSR1 PF01926 274 - 396 1e-15 50S ribosome-binding GTPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018152)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0323981
rosa_multiflora Rmu_sc0002529.1_g000028 Rmu_sc0002529.1_g000029
rosa_roxburghii Rroxscaffold_4G00326010
rosa_rugosa Rorug01G0041000
rosa_samantha Rh1AG058900 Rh1CG060900 Rh1CG061000 Rh1DG064900 Rh1DG065000
rosa_wichuraiana Rw1G005050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 476
AatII GACGTC 1 cut(s) 143
AccB1I GGYRCC 1 cut(s) 387
AccI GTMKAC 1 cut(s) 839
AccII CGCG 1 cut(s) 574
AciI CCGC 4 cut(s) 87, 102, 356, 1667
AclWI GGATC 1 cut(s) 1328
AcsI RAATTY 1 cut(s) 708
AcuI CTGAAG 2 cut(s) 506, 936
AcyI GRCGYC 1 cut(s) 140
AdeI CACNNNGTG 1 cut(s) 884
AfaI GTAC 4 cut(s) 760, 942, 1475, 1657
AfiI CCNNNNNNNGG 3 cut(s) 213, 1114, 1468
AflIII ACRYGT 3 cut(s) 572, 1123, 1531
AgsI TTSAA 9 cut(s) 72, 190, 302, 371, 490, 692, 698, 1175, 1682
AjuI GAANNNNNNNTTGG 2 cut(s) 845, 877
AloI GAACNNNNNNTCC 2 cut(s) 562, 594
Alw21I GWGCWC 4 cut(s) 61, 1107, 1519, 1584
Alw26I GTCTC 1 cut(s) 189
AlwI GGATC 1 cut(s) 1328
Ama87I CYCGRG 3 cut(s) 24, 633, 762
AoxI GGCC 3 cut(s) 525, 1441, 1646
ApaI GGGCCC 1 cut(s) 1445
ApeKI GCWGC 6 cut(s) 4, 203, 536, 730, 1263, 1313
ApoI RAATTY 1 cut(s) 708
ArsI GACNNNNNNTTYG 2 cut(s) 562, 594
Asp700I GAANNNNTTC 1 cut(s) 1023
AspLEI GCGC 1 cut(s) 632
AspS9I GGNCC 8 cut(s) 39, 226, 460, 578, 1441, 1442, 1526, 1647
AsuC2I CCSGG 4 cut(s) 25, 26, 235, 529
AsuHPI GGTGA 6 cut(s) 84, 877, 1256, 1265, 1270, 1430
AsuII TTCGAA 1 cut(s) 324
AvaI CYCGRG 3 cut(s) 24, 633, 762
AvaII GGWCC 5 cut(s) 39, 226, 460, 578, 1526
AxyI CCTNAGG 1 cut(s) 1479
BaeGI GKGCMC 2 cut(s) 874, 1445
BanI GGYRCC 1 cut(s) 387
BanII GRGCYC 5 cut(s) 31, 61, 1445, 1519, 1584
BauI CACGAG 2 cut(s) 396, 1512
Bbv12I GWGCWC 4 cut(s) 61, 1107, 1519, 1584
BbvI GCAGC 5 cut(s) 190, 548, 717, 1275, 1325
BccI CCATC 4 cut(s) 20, 1235, 1244, 1528
BcgI CGANNNNNNTGC 4 cut(s) 300, 334, 377, 411
BciVI GTATCC 1 cut(s) 1156
BcnI CCSGG 4 cut(s) 25, 26, 235, 529
BcoDI GTCTC 1 cut(s) 189
BfaI CTAG 3 cut(s) 435, 927, 1673
BfmI CTRYAG 2 cut(s) 892, 1321
BfoI RGCGCY 1 cut(s) 633
BfuI GTATCC 1 cut(s) 1156
BisI GCNGC 6 cut(s) 5, 204, 537, 731, 1264, 1314
BlpI GCTNAGC 2 cut(s) 264, 814
BlsI GCNGC 6 cut(s) 6, 205, 538, 732, 1265, 1315
Bme1390I CCNGG 4 cut(s) 25, 26, 235, 529
Bme18I GGWCC 5 cut(s) 39, 226, 460, 578, 1526
BmeT110I CYCGRG 3 cut(s) 24, 633, 762
BmgT120I GGNCC 8 cut(s) 39, 226, 460, 578, 1441, 1442, 1526, 1647
BmiI GGNNCC 4 cut(s) 30, 41, 389, 1443
BmrFI CCNGG 4 cut(s) 25, 26, 235, 529
BmrI ACTGGG 1 cut(s) 1495
BmsI GCATC 1 cut(s) 98
BmuI ACTGGG 1 cut(s) 1495
BplI GAGNNNNNCTC 2 cut(s) 1636, 1668
BpmI CTGGAG 1 cut(s) 672
Bpu10I CCTNAGC 1 cut(s) 592
Bpu1102I GCTNAGC 2 cut(s) 264, 814
Bpu14I TTCGAA 1 cut(s) 324
BpuEI CTTGAG 3 cut(s) 1118, 1151, 1181
BpuMI CCSGG 4 cut(s) 25, 26, 235, 529
BsaHI GRCGYC 1 cut(s) 140
BsaI GGTCTC 1 cut(s) 189
BsaJI CCNNGG 6 cut(s) 24, 212, 233, 634, 1149, 1371
Bsc4I CCNNNNNNNGG 3 cut(s) 213, 1114, 1468
Bse1I ACTGG 4 cut(s) 111, 452, 1004, 1490
Bse21I CCTNAGG 1 cut(s) 1479
BseDI CCNNGG 6 cut(s) 24, 212, 233, 634, 1149, 1371
BseGI GGATG 3 cut(s) 754, 1225, 1381
BseLI CCNNNNNNNGG 3 cut(s) 213, 1114, 1468
BseMII CTCAG 5 cut(s) 26, 295, 1284, 1287, 1335
BseNI ACTGG 4 cut(s) 111, 452, 1004, 1490
BseRI GAGGAG 4 cut(s) 21, 736, 1115, 1676
BseSI GKGCMC 2 cut(s) 874, 1445
BseXI GCAGC 5 cut(s) 190, 548, 717, 1275, 1325
BseYI CCCAGC 2 cut(s) 199, 848
BsgI GTGCAG 2 cut(s) 420, 1028
Bsh1236I CGCG 1 cut(s) 574
BshFI GGCC 3 cut(s) 527, 1443, 1648
BshNI GGYRCC 1 cut(s) 387
BsiHKAI GWGCWC 4 cut(s) 61, 1107, 1519, 1584
BsiHKCI CYCGRG 3 cut(s) 24, 633, 762
BsiSI CCGG 3 cut(s) 25, 235, 528
BslFI GGGAC 3 cut(s) 25, 228, 1589
BslI CCNNNNNNNGG 3 cut(s) 213, 1114, 1468
BsmAI GTCTC 1 cut(s) 189
BsmFI GGGAC 3 cut(s) 25, 228, 1589
BsnI GGCC 3 cut(s) 527, 1443, 1648
Bso31I GGTCTC 1 cut(s) 189
BsoBI CYCGRG 3 cut(s) 24, 633, 762
Bsp119I TTCGAA 1 cut(s) 324
Bsp120I GGGCCC 1 cut(s) 1441
Bsp1286I GDGCHC 7 cut(s) 31, 61, 874, 1107, 1445, 1519, 1584
Bsp143I GATC 7 cut(s) 117, 886, 1057, 1109, 1333, 1408, 1633
Bsp1720I GCTNAGC 2 cut(s) 264, 814
Bsp19I CCATGG 1 cut(s) 1371
BspACI CCGC 4 cut(s) 87, 102, 356, 1667
BspANI GGCC 3 cut(s) 527, 1443, 1648
BspCNI CTCAG 5 cut(s) 27, 294, 1283, 1288, 1336
BspFNI CGCG 1 cut(s) 574
BspLI GGNNCC 4 cut(s) 30, 41, 389, 1443
BspPI GGATC 1 cut(s) 1328
BspT104I TTCGAA 1 cut(s) 324
BspT107I GGYRCC 1 cut(s) 387
BspTNI GGTCTC 1 cut(s) 189
BsrI ACTGG 4 cut(s) 111, 452, 1004, 1490
BssECI CCNNGG 6 cut(s) 24, 212, 233, 634, 1149, 1371
BssMI GATC 7 cut(s) 117, 886, 1057, 1109, 1333, 1408, 1633
BssNAI GTATAC 1 cut(s) 840
BssNI GRCGYC 1 cut(s) 140
BssSI CACGAG 2 cut(s) 396, 1512
BssT1I CCWWGG 2 cut(s) 1149, 1371
Bst1107I GTATAC 1 cut(s) 840
Bst2BI CACGAG 2 cut(s) 396, 1512
Bst4CI ACNGT 9 cut(s) 99, 464, 823, 896, 919, 982, 1117, 1196, 1322
Bst6I CTCTTC 2 cut(s) 50, 112
BstACI GRCGYC 1 cut(s) 140
BstBI TTCGAA 1 cut(s) 324
BstC8I GCNNGC 3 cut(s) 261, 502, 1565
BstDSI CCRYGG 1 cut(s) 1371
BstF5I GGATG 3 cut(s) 754, 1225, 1381
BstFNI CGCG 1 cut(s) 574
BstH2I RGCGCY 1 cut(s) 633
BstHHI GCGC 1 cut(s) 632
BstKTI GATC 7 cut(s) 120, 889, 1060, 1112, 1336, 1411, 1636
BstMAI GTCTC 1 cut(s) 189
BstMBI GATC 7 cut(s) 117, 886, 1057, 1109, 1333, 1408, 1633
BstMWI GCNNNNNNNGC 5 cut(s) 265, 533, 824, 1028, 1673
BstNSI RCATGY 3 cut(s) 1073, 1127, 1535
BstSCI CCNGG 4 cut(s) 23, 24, 233, 527
BstSFI CTRYAG 2 cut(s) 892, 1321
BstSLI GKGCMC 2 cut(s) 874, 1445
BstUI CGCG 1 cut(s) 574
BstV1I GCAGC 5 cut(s) 190, 548, 717, 1275, 1325
BstXI CCANNNNNNTGG 1 cut(s) 1412
BstZ17I GTATAC 1 cut(s) 840
Bsu36I CCTNAGG 1 cut(s) 1479
BsuI GTATCC 1 cut(s) 1156
BsuRI GGCC 3 cut(s) 527, 1443, 1648
BtgI CCRYGG 1 cut(s) 1371
BtsCI GGATG 3 cut(s) 754, 1225, 1381
BtsI GCAGTG 2 cut(s) 1083, 1497
BtsIMutI CAGTG 5 cut(s) 901, 1011, 1083, 1201, 1497
Cac8I GCNNGC 3 cut(s) 261, 502, 1565
CfoI GCGC 1 cut(s) 632
Cfr13I GGNCC 8 cut(s) 39, 226, 460, 578, 1441, 1442, 1526, 1647
Cfr9I CCCGGG 1 cut(s) 24
CseI GACGC 1 cut(s) 597
Csp6I GTAC 4 cut(s) 759, 941, 1474, 1656
CviAII CATG 9 cut(s) 497, 794, 1028, 1070, 1124, 1372, 1412, 1438, 1532
CviQI GTAC 4 cut(s) 759, 941, 1474, 1656
DpnI GATC 7 cut(s) 119, 888, 1059, 1111, 1335, 1410, 1635
DpnII GATC 7 cut(s) 117, 886, 1057, 1109, 1333, 1408, 1633
DraIII CACNNNGTG 1 cut(s) 884
Eam1104I CTCTTC 2 cut(s) 50, 112
EarI CTCTTC 2 cut(s) 50, 112
EciI GGCGGA 1 cut(s) 91
Ecl136II GAGCTC 3 cut(s) 59, 1517, 1582
Eco130I CCWWGG 2 cut(s) 1149, 1371
Eco24I GRGCYC 5 cut(s) 31, 61, 1445, 1519, 1584
Eco31I GGTCTC 1 cut(s) 189
Eco47I GGWCC 5 cut(s) 39, 226, 460, 578, 1526
Eco53kI GAGCTC 3 cut(s) 59, 1517, 1582
Eco57I CTGAAG 2 cut(s) 506, 936
Eco81I CCTNAGG 1 cut(s) 1479
Eco88I CYCGRG 3 cut(s) 24, 633, 762
EcoICRI GAGCTC 3 cut(s) 59, 1517, 1582
EcoO109I RGGNCCY 3 cut(s) 39, 1442, 1647
EcoT14I CCWWGG 2 cut(s) 1149, 1371
EcoT38I GRGCYC 5 cut(s) 31, 61, 1445, 1519, 1584
ErhI CCWWGG 2 cut(s) 1149, 1371
FaeI CATG 9 cut(s) 500, 797, 1031, 1073, 1127, 1375, 1415, 1441, 1535
FaqI GGGAC 3 cut(s) 25, 228, 1589
FatI CATG 9 cut(s) 496, 793, 1027, 1069, 1123, 1371, 1411, 1437, 1531
FauI CCCGC 1 cut(s) 1660
FblI GTMKAC 1 cut(s) 839
Fnu4HI GCNGC 6 cut(s) 5, 204, 537, 731, 1264, 1314
FokI GGATG 3 cut(s) 761, 1232, 1388
FriOI GRGCYC 5 cut(s) 31, 61, 1445, 1519, 1584
Fsp4HI GCNGC 6 cut(s) 5, 204, 537, 731, 1264, 1314
FspBI CTAG 3 cut(s) 435, 927, 1673
GlaI GCGC 1 cut(s) 631
GluI GCNGC 6 cut(s) 5, 204, 537, 731, 1264, 1314
GsaI CCCAGC 2 cut(s) 203, 852
GsuI CTGGAG 1 cut(s) 672
HaeII RGCGCY 1 cut(s) 633
HaeIII GGCC 3 cut(s) 527, 1443, 1648
HapII CCGG 3 cut(s) 25, 235, 528
HgaI GACGC 1 cut(s) 597
HhaI GCGC 1 cut(s) 632
Hin1I GRCGYC 1 cut(s) 140
Hin1II CATG 9 cut(s) 500, 797, 1031, 1073, 1127, 1375, 1415, 1441, 1535
Hin6I GCGC 1 cut(s) 630
HinP1I GCGC 1 cut(s) 630
HincII GTYRAC 2 cut(s) 922, 1305
HindII GTYRAC 2 cut(s) 922, 1305
HindIII AAGCTT 3 cut(s) 518, 1020, 1157
HinfI GANTC 8 cut(s) 248, 660, 899, 1229, 1292, 1360, 1391, 1450
HpaII CCGG 3 cut(s) 25, 235, 528
HphI GGTGA 6 cut(s) 84, 877, 1256, 1265, 1270, 1430
Hpy166II GTNNAC 6 cut(s) 587, 840, 922, 941, 1305, 1529
Hpy188I TCNGA 7 cut(s) 36, 213, 997, 1297, 1345, 1396, 1455
Hpy8I GTNNAC 6 cut(s) 587, 840, 922, 941, 1305, 1529
Hpy99I CGWCG 3 cut(s) 142, 705, 759
HpyAV CCTTC 3 cut(s) 151, 960, 1418
HpyCH4III ACNGT 9 cut(s) 99, 464, 823, 896, 919, 982, 1117, 1196, 1322
HpyCH4IV ACGT 3 cut(s) 140, 360, 775
HpyF10VI GCNNNNNNNGC 5 cut(s) 265, 533, 824, 1028, 1673
HpySE526I ACGT 3 cut(s) 140, 360, 775
Hsp92I GRCGYC 1 cut(s) 140
Hsp92II CATG 9 cut(s) 500, 797, 1031, 1073, 1127, 1375, 1415, 1441, 1535
HspAI GCGC 1 cut(s) 630
Kzo9I GATC 7 cut(s) 117, 886, 1057, 1109, 1333, 1408, 1633
LmnI GCTCC 6 cut(s) 34, 653, 1093, 1102, 1310, 1522
Lsp1109I GCAGC 5 cut(s) 190, 548, 717, 1275, 1325
LweI GCATC 1 cut(s) 98
MaeI CTAG 3 cut(s) 435, 927, 1673
MaeII ACGT 3 cut(s) 140, 360, 775
MaeIII GTNAC 1 cut(s) 1119
MalI GATC 7 cut(s) 119, 888, 1059, 1111, 1335, 1410, 1635
MboI GATC 7 cut(s) 117, 886, 1057, 1109, 1333, 1408, 1633
MfeI CAATTG 1 cut(s) 1502
MhlI GDGCHC 7 cut(s) 31, 61, 874, 1107, 1445, 1519, 1584
MluCI AATT 4 cut(s) 331, 708, 741, 1502
MluI ACGCGT 1 cut(s) 572
MlyI GAGTC 2 cut(s) 1301, 1444
MmeI TCCRAC 1 cut(s) 1056
MroXI GAANNNNTTC 1 cut(s) 1023
MseI TTAA 2 cut(s) 744, 1224
MslI CAYNNNNRTG 1 cut(s) 1416
MspA1I CMGCKG 1 cut(s) 203
MspI CCGG 3 cut(s) 25, 235, 528
MspR9I CCNGG 4 cut(s) 25, 26, 235, 529
MunI CAATTG 1 cut(s) 1502
MvnI CGCG 1 cut(s) 574
MwoI GCNNNNNNNGC 5 cut(s) 265, 533, 824, 1028, 1673
NciI CCSGG 4 cut(s) 25, 26, 235, 529
NcoI CCATGG 1 cut(s) 1371
NdeII GATC 7 cut(s) 117, 886, 1057, 1109, 1333, 1408, 1633
NlaIII CATG 9 cut(s) 500, 797, 1031, 1073, 1127, 1375, 1415, 1441, 1535
NlaIV GGNNCC 4 cut(s) 30, 41, 389, 1443
NspI RCATGY 3 cut(s) 1073, 1127, 1535
NspV TTCGAA 1 cut(s) 324
PaeR7I CTCGAG 1 cut(s) 762
PciI ACATGT 2 cut(s) 1123, 1531
PcsI WCGNNNNNNNCGW 1 cut(s) 760
PdmI GAANNNNTTC 1 cut(s) 1023
PfeI GAWTC 6 cut(s) 248, 660, 899, 1229, 1360, 1391
PkrI GCNGC 6 cut(s) 6, 205, 538, 732, 1265, 1315
PleI GAGTC 2 cut(s) 1300, 1444
PpsI GAGTC 2 cut(s) 1300, 1444
PpuMI RGGWCCY 1 cut(s) 39
PscI ACATGT 2 cut(s) 1123, 1531
PsiI TTATAA 1 cut(s) 476
Psp124BI GAGCTC 3 cut(s) 61, 1519, 1584
Psp5II RGGWCCY 1 cut(s) 39
PspFI CCCAGC 2 cut(s) 199, 848
PspN4I GGNNCC 4 cut(s) 30, 41, 389, 1443
PspOMI GGGCCC 1 cut(s) 1441
PspPI GGNCC 8 cut(s) 39, 226, 460, 578, 1441, 1442, 1526, 1647
PspPPI RGGWCCY 1 cut(s) 39
PspXI VCTCGAGB 1 cut(s) 762
PvuII CAGCTG 1 cut(s) 203
RsaI GTAC 4 cut(s) 760, 942, 1475, 1657
RsaNI GTAC 4 cut(s) 759, 941, 1474, 1656
RseI CAYNNNNRTG 1 cut(s) 1416
SacI GAGCTC 3 cut(s) 61, 1519, 1584
SaqAI TTAA 2 cut(s) 744, 1224
SatI GCNGC 6 cut(s) 5, 204, 537, 731, 1264, 1314
Sau3AI GATC 7 cut(s) 117, 886, 1057, 1109, 1333, 1408, 1633
Sau96I GGNCC 8 cut(s) 39, 226, 460, 578, 1441, 1442, 1526, 1647
SchI GAGTC 2 cut(s) 1301, 1444
ScrFI CCNGG 4 cut(s) 25, 26, 235, 529
SduI GDGCHC 7 cut(s) 31, 61, 874, 1107, 1445, 1519, 1584
SfaNI GCATC 1 cut(s) 98
SfcI CTRYAG 2 cut(s) 892, 1321
Sfr274I CTCGAG 1 cut(s) 762
SfuI TTCGAA 1 cut(s) 324
SinI GGWCC 5 cut(s) 39, 226, 460, 578, 1526
SlaI CTCGAG 1 cut(s) 762
SmaI CCCGGG 1 cut(s) 26
SmiMI CAYNNNNRTG 1 cut(s) 1416
SmlI CTYRAG 4 cut(s) 762, 1097, 1130, 1160
SmoI CTYRAG 4 cut(s) 762, 1097, 1130, 1160
Sse9I AATT 4 cut(s) 331, 708, 741, 1502
SsiI CCGC 4 cut(s) 87, 102, 356, 1667
SspMI CTAG 3 cut(s) 435, 927, 1673
SstI GAGCTC 3 cut(s) 61, 1519, 1584
StyD4I CCNGG 4 cut(s) 23, 24, 233, 527
StyI CCWWGG 2 cut(s) 1149, 1371
TaaI ACNGT 9 cut(s) 99, 464, 823, 896, 919, 982, 1117, 1196, 1322
TaiI ACGT 3 cut(s) 143, 363, 778
TaqI TCGA 6 cut(s) 137, 324, 763, 904, 1389, 1636
TasI AATT 4 cut(s) 331, 708, 741, 1502
TatI WGTACW 1 cut(s) 940
TfiI GAWTC 6 cut(s) 248, 660, 899, 1229, 1360, 1391
Tru1I TTAA 2 cut(s) 744, 1224
Tru9I TTAA 2 cut(s) 744, 1224
TscAI CASTG 5 cut(s) 901, 1011, 1090, 1201, 1497
TseI GCWGC 6 cut(s) 4, 203, 536, 730, 1263, 1313
TspDTI ATGAA 3 cut(s) 652, 1016, 1242
TspMI CCCGGG 1 cut(s) 24
TspRI CASTG 5 cut(s) 901, 1011, 1090, 1201, 1497
VpaK11BI GGWCC 5 cut(s) 39, 226, 460, 578, 1526
XapI RAATTY 1 cut(s) 708
XceI RCATGY 3 cut(s) 1073, 1127, 1535
XhoI CTCGAG 1 cut(s) 762
XmaI CCCGGG 1 cut(s) 24
XmiI GTMKAC 1 cut(s) 839
XmnI GAANNNNTTC 1 cut(s) 1023
XspI CTAG 3 cut(s) 435, 927, 1673
ZraI GACGTC 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.