Fasciclin-like arabinogalactan protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45470 AT3G60900 |
| fragaria_vesca | FvH4_7g12120 |
| malus_domestica | MD02G1201100.v1.1 |
| prunus_persica | Prupe.2G147700_v2.0.a1 |
| pyrus_communis | pycom02g16450 |
| rosa_chinensis | RchiOBHm_Chr1g0350871 |
| rosa_laevigata | RLG00000028447 |
| rosa_multiflora | Rmu_co8189458.1_g000001 Rmu_co8311065.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00304450 |
| rosa_rugosa | Rorug01G0214800 |
| rosa_samantha | Rh1AG229200 Rh1BG199200 Rh1CG214000 Rh1DG227100 |
| rosa_wichuraiana | Rw1G019860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 125 |
| AluBI | AGCT | 3 cut(s) | 33, 113, 118 |
| AluI | AGCT | 3 cut(s) | 33, 113, 118 |
| ApeKI | GCWGC | 1 cut(s) | 118 |
| BbvI | GCAGC | 1 cut(s) | 105 |
| BccI | CCATC | 1 cut(s) | 125 |
| BfaI | CTAG | 1 cut(s) | 23 |
| BisI | GCNGC | 1 cut(s) | 119 |
| BlpI | GCTNAGC | 1 cut(s) | 114 |
| BlsI | GCNGC | 1 cut(s) | 120 |
| BmiI | GGNNCC | 1 cut(s) | 143 |
| BmsI | GCATC | 1 cut(s) | 71 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 114 |
| BsaBI | GATNNNNATC | 1 cut(s) | 135 |
| Bse8I | GATNNNNATC | 1 cut(s) | 135 |
| BseJI | GATNNNNATC | 1 cut(s) | 135 |
| BseMII | CTCAG | 2 cut(s) | 5, 105 |
| BseXI | GCAGC | 1 cut(s) | 105 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 114 |
| BspCNI | CTCAG | 2 cut(s) | 6, 106 |
| BspLI | GGNNCC | 1 cut(s) | 143 |
| Bst4CI | ACNGT | 1 cut(s) | 87 |
| BstDEI | CTNAG | 2 cut(s) | 14, 114 |
| BstEII | GGTNACC | 1 cut(s) | 103 |
| BstPI | GGTNACC | 1 cut(s) | 103 |
| BstV1I | GCAGC | 1 cut(s) | 105 |
| CviJI | RGCY | 3 cut(s) | 33, 113, 118 |
| CviKI_1 | RGCY | 3 cut(s) | 33, 113, 118 |
| DdeI | CTNAG | 2 cut(s) | 14, 114 |
| Eco91I | GGTNACC | 1 cut(s) | 103 |
| EcoO65I | GGTNACC | 1 cut(s) | 103 |
| FaiI | YATR | 2 cut(s) | 49, 51 |
| Fnu4HI | GCNGC | 1 cut(s) | 119 |
| Fsp4HI | GCNGC | 1 cut(s) | 119 |
| FspBI | CTAG | 1 cut(s) | 23 |
| GluI | GCNGC | 1 cut(s) | 119 |
| Hpy188I | TCNGA | 2 cut(s) | 15, 141 |
| HpyCH4III | ACNGT | 1 cut(s) | 87 |
| HpyF3I | CTNAG | 2 cut(s) | 14, 114 |
| LpnPI | CCDG | 2 cut(s) | 86, 133 |
| Lsp1109I | GCAGC | 1 cut(s) | 105 |
| LweI | GCATC | 1 cut(s) | 71 |
| MaeI | CTAG | 1 cut(s) | 23 |
| MaeIII | GTNAC | 1 cut(s) | 103 |
| MboII | GAAGA | 1 cut(s) | 16 |
| MnlI | CCTC | 1 cut(s) | 55 |
| NlaIV | GGNNCC | 1 cut(s) | 143 |
| PkrI | GCNGC | 1 cut(s) | 120 |
| PspEI | GGTNACC | 1 cut(s) | 103 |
| PspN4I | GGNNCC | 1 cut(s) | 143 |
| SatI | GCNGC | 1 cut(s) | 119 |
| SetI | ASST | 4 cut(s) | 35, 115, 120, 158 |
| SfaNI | GCATC | 1 cut(s) | 71 |
| SgeI | CNNG | 4 cut(s) | 35, 68, 113, 134 |
| SspMI | CTAG | 1 cut(s) | 23 |
| TaaI | ACNGT | 1 cut(s) | 87 |
| TseI | GCWGC | 1 cut(s) | 118 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XspI | CTAG | 1 cut(s) | 23 |