Rorug05G0476200

PPR repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0018016
Physical Location & Seq
Reverse (-)
65525215 .. 65526794
1580 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0476200.1

Sequence Viewer

Length: 1083 bp
ATGGCCATGTCATCGCCGTTGCCGACGACGTCGTATTGGTGCCACCGATGCACCCGCTTCGTCCGCATCTTCGTCCAAGACGCCTCCGTCACCTGCCCCTACTGCGACACAGGGTTCCTCGAAGAGATAGAGACGACTCCGCCGCCGGCGCCGACTCATCACCACCGTCGCTTCCCGCCCTCTTATGCTCACGATCAAGGACCGGGTCAGAACCCCGCTCCGACCTCCCGCCGGGTCCGCGGGAGCTCCGGCGACAGGTCGCCTTTTAATCCGGTCATCGTCCTACGTGGCGCGGCCGATGACTCCGAGTCGAGCTCGTTCGAGCTCTACTACGACGACGCTGCCGGGTCTGGGCTCCGGCCGCTCCCCCCCACCATGTCCGAGTTCTTAATGGGGTCGGGCTTTGATCGGTTGCTGGAGCAGCTGTCCCAGATCGAAATCACCGGGCTGGGCCGACCCGAGAACCCGCCCGCTTCCAAATCCGCCGTGGAGTCTATGCCGGTGATTAAAATCAACGAATCCCACGTCGGGTCGGAGTCGCACTGCGCGGTCTGCAAAGAAGCTTTCGAATTCGGGTCGGAGGCCCGGGAAATGCCTTGCAACCACATATACCATTCGGATTGCATCCTCCCATGGCTCTCGATGCGAAACTCGTGCCCGGTCTGCCGGCACGAGCTGCCCGTTGACCGAAATTCGGATTCGGGTCACGACGAGGAGACCACCGGGTTGACTATCTGGAGATTACCCGGAGGCGGGTTCGCCGTGGGTCGGTTTTCGGGCGGGAGAAGACCCGGGGAGCGCGAATTGCCGGTTGTGTACACTGAAATGGACGGCGGGTTTAACGGAAACGGGGCTCCGAGAAGGGTATTATGGCAATCGAGGAATAGAGGAAGAGAGAGCCGCGGGATTGGCTGGGCTTTCCGTAATTTGACCTCGTTCTTGGGGAGGTTTAGGTCAAATTCGTCTTCGAGGACCGGGTCGGAAACCGGGTCCCGGGCATTTAGTCGGAGTCGGAGCCAGTCAAGCTCGGTGTTCGGTCGGTACGCGCAGCGCCGGAGCCGGGCTTGGGTCTTGGATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

360

Amino Acids

39.9

Weight (kDa)

8.07

Isoelectric Point (pI)

77.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_19 PF14369 10 - 43 3e-13 zinc-ribbon
zf-RING_2 PF13639 181 - 223 1e-12 Ring finger domain
zf-C3HC4_2 PF13923 182 - 222 3.9e-08 Zinc finger, C3HC4 type (RING finger)
zf-rbx1 PF12678 182 - 223 1.2e-06 RING-H2 zinc finger domain
zf-C3HC4 PF00097 182 - 222 1.9e-06 Zinc finger, C3HC4 type (RING finger)
zf-RING_11 PF17123 182 - 209 2.4e-06 RING-like zinc finger
zf-RING_UBOX PF13445 182 - 220 6.8e-06 RING-type zinc-finger
DUF1117 PF06547 242 - 348 8.5e-38 Protein of unknown function (DUF1117)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018016)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g44710
prunus_persica Prupe.6G010900_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0081411
rosa_laevigata RLG00000036932
rosa_multiflora Rmu_sc0007768.1_g000022
rosa_roxburghii Rroxscaffold_1G00002130
rosa_rugosa Rorug05G0476200
rosa_samantha Rh5BG552100 Rh5CG574700 Rh5DG561700
rosa_wichuraiana Rw5G049070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 101
AasI GACNNNNNNGTC 1 cut(s) 86
AatII GACGTC 1 cut(s) 32
Acc36I ACCTGC 1 cut(s) 101
AccB1I GGYRCC 2 cut(s) 39, 148
AccBSI CCGCTC 2 cut(s) 218, 364
AccII CGCG 6 cut(s) 240, 293, 548, 801, 903, 1046
AcoI YGGCCR 3 cut(s) 3, 294, 359
AcsI RAATTY 3 cut(s) 569, 691, 958
AcyI GRCGYC 3 cut(s) 29, 81, 149
AfaI GTAC 2 cut(s) 818, 1043
AhdI GACNNNNNGTC 1 cut(s) 307
AjiI CACGTC 1 cut(s) 526
AluBI AGCT 7 cut(s) 246, 315, 325, 424, 563, 676, 1026
AluI AGCT 7 cut(s) 246, 315, 325, 424, 563, 676, 1026
Alw21I GWGCWC 3 cut(s) 248, 317, 327
Alw26I GTCTC 2 cut(s) 125, 710
Ama87I CYCGRG 4 cut(s) 458, 585, 791, 993
AoxI GGCC 5 cut(s) 3, 294, 359, 451, 582
ApeKI GCWGC 4 cut(s) 341, 421, 676, 1048
ApoI RAATTY 3 cut(s) 569, 691, 958
ArsI GACNNNNNNTTYG 2 cut(s) 510, 542
AspLEI GCGC 6 cut(s) 151, 293, 548, 801, 1048, 1053
AspS9I GGNCC 6 cut(s) 200, 235, 451, 583, 972, 990
AsuHPI GGTGA 4 cut(s) 82, 152, 433, 514
AsuII TTCGAA 1 cut(s) 567
AvaI CYCGRG 4 cut(s) 458, 585, 791, 993
AvaII GGWCC 4 cut(s) 200, 235, 972, 990
BaeGI GKGCMC 1 cut(s) 659
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 39, 148
BanII GRGCYC 5 cut(s) 248, 317, 327, 357, 856
BauI CACGAG 2 cut(s) 652, 671
BbsI GAAGAC 2 cut(s) 793, 957
Bbv12I GWGCWC 3 cut(s) 248, 317, 327
BbvI GCAGC 4 cut(s) 328, 433, 663, 1060
BceAI ACGGC 3 cut(s) 470, 746, 847
BcgI CGANNNNNNTGC 6 cut(s) 40, 74, 323, 357, 636, 670
BcoDI GTCTC 2 cut(s) 125, 710
BfoI RGCGCY 2 cut(s) 152, 1054
BfuAI ACCTGC 1 cut(s) 101
BisI GCNGC 8 cut(s) 143, 294, 342, 362, 422, 677, 901, 1049
BlsI GCNGC 8 cut(s) 144, 295, 343, 363, 423, 678, 902, 1050
Bme18I GGWCC 4 cut(s) 200, 235, 972, 990
BmeRI GACNNNNNGTC 1 cut(s) 307
BmeT110I CYCGRG 4 cut(s) 458, 585, 791, 993
BmgBI CACGTC 1 cut(s) 526
BmgT120I GGNCC 6 cut(s) 200, 235, 451, 583, 972, 990
BmsI GCATC 4 cut(s) 38, 75, 633, 633
BpiI GAAGAC 2 cut(s) 793, 957
BplI GAGNNNNNCTC 2 cut(s) 299, 331
BpmI CTGGAG 2 cut(s) 437, 757
Bpu14I TTCGAA 1 cut(s) 567
BsaAI YACGTR 1 cut(s) 287
BsaBI GATNNNNATC 2 cut(s) 437, 509
BsaHI GRCGYC 3 cut(s) 29, 81, 149
BsaI GGTCTC 1 cut(s) 710
BsaJI CCNNGG 9 cut(s) 238, 486, 585, 632, 762, 791, 792, 901, 993
BsaWI WCCGGW 1 cut(s) 271
BsaXI ACNNNNNCTCC 2 cut(s) 410, 440
Bse118I RCCGGY 4 cut(s) 145, 499, 666, 808
Bse1I ACTGG 1 cut(s) 1018
Bse8I GATNNNNATC 2 cut(s) 437, 509
BseDI CCNNGG 9 cut(s) 238, 486, 585, 632, 762, 791, 792, 901, 993
BseGI GGATG 2 cut(s) 624, 1081
BseJI GATNNNNATC 2 cut(s) 437, 509
BseNI ACTGG 1 cut(s) 1018
BseRI GAGGAG 1 cut(s) 728
BseSI GKGCMC 1 cut(s) 659
BseX3I CGGCCG 2 cut(s) 294, 359
BseXI GCAGC 4 cut(s) 328, 433, 663, 1060
BseYI CCCAGC 2 cut(s) 448, 912
Bsh1236I CGCG 6 cut(s) 240, 293, 548, 801, 903, 1046
Bsh1285I CGRYCG 3 cut(s) 297, 362, 1039
BshFI GGCC 5 cut(s) 5, 296, 361, 453, 584
BshNI GGYRCC 2 cut(s) 39, 148
BsiEI CGRYCG 3 cut(s) 297, 362, 1039
BsiHKAI GWGCWC 3 cut(s) 248, 317, 327
BsiHKCI CYCGRG 4 cut(s) 458, 585, 791, 993
BslFI GGGAC 2 cut(s) 412, 976
BsmAI GTCTC 2 cut(s) 125, 710
BsmBI CGTCTC 1 cut(s) 125
BsmFI GGGAC 2 cut(s) 412, 976
BsnI GGCC 5 cut(s) 5, 296, 361, 453, 584
Bso31I GGTCTC 1 cut(s) 710
BsoBI CYCGRG 4 cut(s) 458, 585, 791, 993
Bsp119I TTCGAA 1 cut(s) 567
Bsp1286I GDGCHC 6 cut(s) 248, 317, 327, 357, 659, 856
Bsp1407I TGTACA 1 cut(s) 816
Bsp143I GATC 3 cut(s) 193, 406, 432
Bsp19I CCATGG 1 cut(s) 632
BspANI GGCC 5 cut(s) 5, 296, 361, 453, 584
BspFNI CGCG 6 cut(s) 240, 293, 548, 801, 903, 1046
BspMI ACCTGC 1 cut(s) 101
BspT104I TTCGAA 1 cut(s) 567
BspT107I GGYRCC 2 cut(s) 39, 148
BspTNI GGTCTC 1 cut(s) 710
BsrBI CCGCTC 2 cut(s) 218, 364
BsrFI RCCGGY 4 cut(s) 145, 499, 666, 808
BsrGI TGTACA 1 cut(s) 816
BsrI ACTGG 1 cut(s) 1018
BssAI RCCGGY 4 cut(s) 145, 499, 666, 808
BssECI CCNNGG 9 cut(s) 238, 486, 585, 632, 762, 791, 792, 901, 993
BssMI GATC 3 cut(s) 193, 406, 432
BssNI GRCGYC 3 cut(s) 29, 81, 149
BssSI CACGAG 2 cut(s) 652, 671
BssT1I CCWWGG 1 cut(s) 632
Bst2BI CACGAG 2 cut(s) 652, 671
Bst4CI ACNGT 1 cut(s) 167
Bst6I CTCTTC 2 cut(s) 117, 886
BstACI GRCGYC 3 cut(s) 29, 81, 149
BstAPI GCANNNNNTGC 1 cut(s) 676
BstAUI TGTACA 1 cut(s) 816
BstBAI YACGTR 1 cut(s) 287
BstBI TTCGAA 1 cut(s) 567
BstC8I GCNNGC 3 cut(s) 147, 471, 668
BstDSI CCRYGG 5 cut(s) 238, 486, 632, 762, 901
BstF5I GGATG 2 cut(s) 624, 1081
BstFNI CGCG 6 cut(s) 240, 293, 548, 801, 903, 1046
BstH2I RGCGCY 2 cut(s) 152, 1054
BstHHI GCGC 6 cut(s) 151, 293, 548, 801, 1048, 1053
BstKTI GATC 3 cut(s) 196, 409, 435
BstMAI GTCTC 2 cut(s) 125, 710
BstMBI GATC 3 cut(s) 193, 406, 432
BstMCI CGRYCG 3 cut(s) 297, 362, 1039
BstSLI GKGCMC 1 cut(s) 659
BstUI CGCG 6 cut(s) 240, 293, 548, 801, 903, 1046
BstV1I GCAGC 4 cut(s) 328, 433, 663, 1060
BstV2I GAAGAC 2 cut(s) 793, 957
BstZI CGGCCG 2 cut(s) 294, 359
BsuRI GGCC 5 cut(s) 5, 296, 361, 453, 584
BtgI CCRYGG 5 cut(s) 238, 486, 632, 762, 901
BtrI CACGTC 1 cut(s) 526
BtsCI GGATG 2 cut(s) 624, 1081
BtsI GCAGTG 1 cut(s) 541
BtsIMutI CAGTG 2 cut(s) 541, 819
BveI ACCTGC 1 cut(s) 101
Cac8I GCNNGC 3 cut(s) 147, 471, 668
CfoI GCGC 6 cut(s) 151, 293, 548, 801, 1048, 1053
Cfr10I RCCGGY 4 cut(s) 145, 499, 666, 808
Cfr13I GGNCC 6 cut(s) 200, 235, 451, 583, 972, 990
Cfr42I CCGCGG 2 cut(s) 241, 904
Cfr9I CCCGGG 3 cut(s) 585, 791, 993
CseI GACGC 2 cut(s) 89, 347
Csp6I GTAC 2 cut(s) 817, 1042
CviAII CATG 3 cut(s) 7, 376, 633
CviQI GTAC 2 cut(s) 817, 1042
DinI GGCGCC 1 cut(s) 150
DpnI GATC 3 cut(s) 195, 408, 434
DpnII GATC 3 cut(s) 193, 406, 432
DrdI GACNNNNNNGTC 1 cut(s) 86
DriI GACNNNNNGTC 1 cut(s) 307
DseDI GACNNNNNNGTC 1 cut(s) 86
EaeI YGGCCR 3 cut(s) 3, 294, 359
EagI CGGCCG 2 cut(s) 294, 359
Eam1104I CTCTTC 2 cut(s) 117, 886
Eam1105I GACNNNNNGTC 1 cut(s) 307
EarI CTCTTC 2 cut(s) 117, 886
EciI GGCGGA 2 cut(s) 129, 472
Ecl136II GAGCTC 3 cut(s) 246, 315, 325
EclXI CGGCCG 2 cut(s) 294, 359
Eco130I CCWWGG 1 cut(s) 632
Eco24I GRGCYC 5 cut(s) 248, 317, 327, 357, 856
Eco31I GGTCTC 1 cut(s) 710
Eco47I GGWCC 4 cut(s) 200, 235, 972, 990
Eco52I CGGCCG 2 cut(s) 294, 359
Eco53kI GAGCTC 3 cut(s) 246, 315, 325
Eco88I CYCGRG 4 cut(s) 458, 585, 791, 993
EcoICRI GAGCTC 3 cut(s) 246, 315, 325
EcoO109I RGGNCCY 1 cut(s) 990
EcoRI GAATTC 1 cut(s) 569
EcoT14I CCWWGG 1 cut(s) 632
EcoT38I GRGCYC 5 cut(s) 248, 317, 327, 357, 856
EgeI GGCGCC 1 cut(s) 150
EheI GGCGCC 1 cut(s) 150
ErhI CCWWGG 1 cut(s) 632
Esp3I CGTCTC 1 cut(s) 125
FaeI CATG 3 cut(s) 10, 379, 636
FaiI YATR 8 cut(s) 8, 186, 377, 497, 608, 610, 634, 871
FaqI GGGAC 2 cut(s) 412, 976
FatI CATG 3 cut(s) 6, 375, 632
Fnu4HI GCNGC 8 cut(s) 143, 294, 342, 362, 422, 677, 901, 1049
FokI GGATG 1 cut(s) 611
FriOI GRGCYC 5 cut(s) 248, 317, 327, 357, 856
Fsp4HI GCNGC 8 cut(s) 143, 294, 342, 362, 422, 677, 901, 1049
GlaI GCGC 6 cut(s) 150, 292, 547, 800, 1047, 1052
GluI GCNGC 8 cut(s) 143, 294, 342, 362, 422, 677, 901, 1049
GsaI CCCAGC 2 cut(s) 452, 916
GsuI CTGGAG 2 cut(s) 437, 757
HaeII RGCGCY 2 cut(s) 152, 1054
HaeIII GGCC 5 cut(s) 5, 296, 361, 453, 584
HgaI GACGC 2 cut(s) 89, 347
HhaI GCGC 6 cut(s) 151, 293, 548, 801, 1048, 1053
Hin1I GRCGYC 3 cut(s) 29, 81, 149
Hin1II CATG 3 cut(s) 10, 379, 636
Hin6I GCGC 6 cut(s) 149, 291, 546, 799, 1046, 1051
HinP1I GCGC 6 cut(s) 149, 291, 546, 799, 1046, 1051
HincII GTYRAC 2 cut(s) 685, 729
HindII GTYRAC 2 cut(s) 685, 729
HindIII AAGCTT 1 cut(s) 561
HinfI GANTC 9 cut(s) 136, 154, 302, 308, 491, 518, 536, 698, 1009
HphI GGTGA 4 cut(s) 82, 152, 433, 514
Hpy166II GTNNAC 4 cut(s) 685, 729, 817, 819
Hpy188III TCNNGA 4 cut(s) 191, 640, 707, 736
Hpy8I GTNNAC 4 cut(s) 685, 729, 817, 819
Hpy99I CGWCG 8 cut(s) 28, 31, 34, 171, 338, 341, 530, 713
HpyAV CCTTC 1 cut(s) 855
HpyCH4III ACNGT 1 cut(s) 167
HpyCH4IV ACGT 3 cut(s) 29, 286, 525
HpyCH4V TGCA 4 cut(s) 51, 555, 600, 624
HpySE526I ACGT 3 cut(s) 29, 286, 525
Hsp92I GRCGYC 3 cut(s) 29, 81, 149
Hsp92II CATG 3 cut(s) 10, 379, 636
HspAI GCGC 6 cut(s) 149, 291, 546, 799, 1046, 1051
KasI GGCGCC 1 cut(s) 148
KflI GGGWCCC 1 cut(s) 990
KroI GCCGGC 2 cut(s) 145, 666
KroNI GCCGGC 2 cut(s) 147, 668
KspI CCGCGG 2 cut(s) 241, 904
Kzo9I GATC 3 cut(s) 193, 406, 432
Lsp1109I GCAGC 4 cut(s) 328, 433, 663, 1060
LweI GCATC 4 cut(s) 38, 75, 633, 633
MaeII ACGT 3 cut(s) 29, 286, 525
MaeIII GTNAC 2 cut(s) 88, 704
MalI GATC 3 cut(s) 195, 408, 434
MbiI CCGCTC 2 cut(s) 218, 364
MboI GATC 3 cut(s) 193, 406, 432
MboII GAAGA 5 cut(s) 61, 134, 798, 903, 957
MhlI GDGCHC 6 cut(s) 248, 317, 327, 357, 659, 856
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 5 cut(s) 569, 691, 803, 925, 958
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 149
MlyI GAGTC 7 cut(s) 130, 148, 296, 317, 500, 545, 1018
MmeI TCCRAC 6 cut(s) 245, 513, 558, 960, 986, 992
Mox20I TGGCCA 1 cut(s) 5
MreI CGCCGGCG 1 cut(s) 145
MroNI GCCGGC 2 cut(s) 145, 666
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 267, 389, 507, 840
MslI CAYNNNNRTG 1 cut(s) 824
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 3 cut(s) 240, 424, 903
MteI GCGCNGCGC 1 cut(s) 1049
MvnI CGCG 6 cut(s) 240, 293, 548, 801, 903, 1046
NaeI GCCGGC 2 cut(s) 147, 668
NarI GGCGCC 1 cut(s) 149
NcoI CCATGG 1 cut(s) 632
NdeII GATC 3 cut(s) 193, 406, 432
NgoMIV GCCGGC 2 cut(s) 145, 666
NlaIII CATG 3 cut(s) 10, 379, 636
NmuCI GTSAC 2 cut(s) 88, 704
NspV TTCGAA 1 cut(s) 567
PaqCI CACCTGC 1 cut(s) 101
PcsI WCGNNNNNNNCGW 3 cut(s) 20, 522, 678
PdiI GCCGGC 2 cut(s) 147, 668
PfeI GAWTC 2 cut(s) 518, 698
PflFI GACNNNGTC 3 cut(s) 28, 204, 976
PkrI GCNGC 8 cut(s) 144, 295, 343, 363, 423, 678, 902, 1050
PleI GAGTC 7 cut(s) 130, 148, 296, 316, 499, 544, 1017
PluTI GGCGCC 1 cut(s) 152
PpsI GAGTC 7 cut(s) 130, 148, 296, 316, 499, 544, 1017
Ppu21I YACGTR 1 cut(s) 287
PpuMI RGGWCCY 1 cut(s) 990
Psp124BI GAGCTC 3 cut(s) 248, 317, 327
Psp5II RGGWCCY 1 cut(s) 990
PspFI CCCAGC 2 cut(s) 448, 912
PspPI GGNCC 6 cut(s) 200, 235, 451, 583, 972, 990
PspPPI RGGWCCY 1 cut(s) 990
PsyI GACNNNGTC 3 cut(s) 28, 204, 976
PvuII CAGCTG 1 cut(s) 424
RsaI GTAC 2 cut(s) 818, 1043
RsaNI GTAC 2 cut(s) 817, 1042
RseI CAYNNNNRTG 1 cut(s) 824
SacI GAGCTC 3 cut(s) 248, 317, 327
SacII CCGCGG 2 cut(s) 241, 904
SaqAI TTAA 4 cut(s) 267, 389, 507, 840
SatI GCNGC 8 cut(s) 143, 294, 342, 362, 422, 677, 901, 1049
Sau3AI GATC 3 cut(s) 193, 406, 432
Sau96I GGNCC 6 cut(s) 200, 235, 451, 583, 972, 990
SchI GAGTC 7 cut(s) 130, 148, 296, 317, 500, 545, 1018
SduI GDGCHC 6 cut(s) 248, 317, 327, 357, 659, 856
SfaNI GCATC 4 cut(s) 38, 75, 633, 633
SfoI GGCGCC 1 cut(s) 150
Sfr303I CCGCGG 2 cut(s) 241, 904
SfuI TTCGAA 1 cut(s) 567
SgrAI CRCCGGYG 1 cut(s) 145
SgrBI CCGCGG 2 cut(s) 241, 904
SinI GGWCC 4 cut(s) 200, 235, 972, 990
SmaI CCCGGG 3 cut(s) 587, 793, 995
SmiMI CAYNNNNRTG 1 cut(s) 824
Sse9I AATT 5 cut(s) 569, 691, 803, 925, 958
SspDI GGCGCC 1 cut(s) 148
SstI GAGCTC 3 cut(s) 248, 317, 327
StyI CCWWGG 1 cut(s) 632
TaaI ACNGT 1 cut(s) 167
TaiI ACGT 3 cut(s) 32, 289, 528
TaqI TCGA 8 cut(s) 120, 311, 321, 435, 567, 641, 878, 968
TaqII GACCGA 2 cut(s) 702, 1025
TasI AATT 5 cut(s) 569, 691, 803, 925, 958
TatI WGTACW 1 cut(s) 816
TauI GCSGC 4 cut(s) 145, 296, 364, 903
TfiI GAWTC 2 cut(s) 518, 698
Tru1I TTAA 4 cut(s) 267, 389, 507, 840
Tru9I TTAA 4 cut(s) 267, 389, 507, 840
TscAI CASTG 2 cut(s) 548, 826
TseFI GTSAC 2 cut(s) 88, 704
TseI GCWGC 4 cut(s) 341, 421, 676, 1048
Tsp45I GTSAC 2 cut(s) 88, 704
TspGWI ACGGA 3 cut(s) 76, 858, 911
TspMI CCCGGG 3 cut(s) 585, 791, 993
TspRI CASTG 2 cut(s) 548, 826
Tth111I GACNNNGTC 3 cut(s) 28, 204, 976
VpaK11BI GGWCC 4 cut(s) 200, 235, 972, 990
XapI RAATTY 3 cut(s) 569, 691, 958
XcmI CCANNNNNNNNNTGG 1 cut(s) 484
XmaI CCCGGG 3 cut(s) 585, 791, 993
ZraI GACGTC 1 cut(s) 30
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.